Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2332674Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2333768Superfamily a.118.8: TPR-like [48452] (10 families) (S)
  5. 2333769Family a.118.8.1: Tetratricopeptide repeat (TPR) [48453] (21 protein domains)
  6. 2333906Protein automated matches [190103] (4 species)
    not a true protein

Species:

  1. 2333907Bacillus subtilis [TaxId:1423] [161323] (1 PDB entry)
  2. 2333909Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [226182] (1 PDB entry)
  3. 2333911Human (Homo sapiens) [TaxId:9606] [186825] (11 PDB entries)
    1. Domain for 1wm5:
    2. Domain for 1ya0:
    3. Domain for 2c0l:
    4. Domains for 2c0m:
      1. 2333926Domain d2c0ma_: 2c0m A: [129596]
        automated match to d1fcha_
      2. 2333927Domain d2c0mb_: 2c0m B: [129597]
        automated match to d1fcha_
      3. 2333928Domain d2c0mc_: 2c0m C: [129598]
        automated match to d1fcha_
      4. 2333929Domain d2c0mf_: 2c0m F: [129599]
        automated match to d1fcha_
    5. Domains for 2j9q:
      1. 2333924Domain d2j9qa2: 2j9q A:315-639 [138152]
        Other proteins in same PDB: d2j9qa3
        automated match to d1fcha_
        complexed with sr
      2. 2333925Domain d2j9qb_: 2j9q B: [161474]
        Other proteins in same PDB: d2j9qa3
        automated match to d1fcha_
        complexed with sr
    6. Domain for 2v5f:
    7. Domains for 2vyi:
      1. 2333913Domain d2vyia_: 2vyi A: [153706]
        automated match to d2vyib_
      2. 2333914Domain d2vyib_: 2vyi B: [231362]
        automated match to d2vyia1
    8. Domains for 3imz:
      1. 2333918Domain d3imzb_: 3imz B: [305573]
        Other proteins in same PDB: d3imza_, d3imzc_
        automated match to d2j9qa_
        complexed with btb, plp
      2. 2333919Domain d3imzd_: 3imz D: [305575]
        Other proteins in same PDB: d3imza_, d3imzc_
        automated match to d2j9qa_
        complexed with btb, plp
    9. Domains for 3r9a:
      1. 2333915Domain d3r9ab_: 3r9a B: [184856]
        Other proteins in same PDB: d3r9aa_, d3r9ac_
        automated match to d1fcha_
        complexed with btb
      2. 2333916Domain d3r9ad_: 3r9a D: [184858]
        Other proteins in same PDB: d3r9aa_, d3r9ac_
        automated match to d1fcha_
        complexed with btb
    10. Domains for 4kxk:
      1. 2333930Domain d4kxkb_: 4kxk B: [261081]
        Other proteins in same PDB: d4kxka_, d4kxkc_
        automated match to d2j9qa_
        complexed with bme, so4
      2. 2333931Domain d4kxkd_: 4kxk D: [261084]
        Other proteins in same PDB: d4kxka_, d4kxkc_
        automated match to d2j9qa_
        complexed with bme, so4
    11. Domains for 4kyo:
      1. 2333920Domain d4kyob_: 4kyo B: [261085]
        Other proteins in same PDB: d4kyoa_, d4kyoc_
        automated match to d2j9qa_
        complexed with bme, btb, so4
      2. 2333921Domain d4kyod_: 4kyo D: [261086]
        Other proteins in same PDB: d4kyoa_, d4kyoc_
        automated match to d2j9qa_
        complexed with bme, btb, so4
  4. 2333932Yersinia enterocolitica [TaxId:630] [161324] (1 PDB entry)

More info for Protein automated matches from a.118.8.1: Tetratricopeptide repeat (TPR)

Timeline for Protein automated matches from a.118.8.1: Tetratricopeptide repeat (TPR):