Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1201078Fold d.38: Thioesterase/thiol ester dehydrase-isomerase [54636] (1 superfamily)
    core: beta-alpha-beta(4); 2 layers: alpha/beta
  4. 1201079Superfamily d.38.1: Thioesterase/thiol ester dehydrase-isomerase [54637] (9 families) (S)
  5. 1201307Family d.38.1.5: PaaI/YdiI-like [89902] (15 proteins)
  6. 1201400Protein automated matches [190102] (5 species)
    not a true protein

Species:

  1. Arthrobacter sp. [TaxId:1667] [194804] (9 PDB entries)
    1. Domains for 3r32:
      1. 1201410Domain d3r32a_: 3r32 A: [195713]
        automated match to d1q4ta_
        complexed with 4co; mutant
      2. 1201411Domain d3r32b_: 3r32 B: [195712]
        automated match to d1q4ta_
        complexed with 4co; mutant
    2. Domains for 3r34:
      1. 1201404Domain d3r34a_: 3r34 A: [195717]
        automated match to d1q4ta_
        complexed with coa, edo; mutant
      2. 1201405Domain d3r34b_: 3r34 B: [195716]
        automated match to d1q4ta_
        complexed with coa, edo; mutant
    3. Domains for 3r35:
      1. 1201416Domain d3r35a_: 3r35 A: [195715]
        automated match to d1q4ta_
        complexed with 4co; mutant
      2. 1201417Domain d3r35b_: 3r35 B: [195714]
        automated match to d1q4ta_
        complexed with 4co; mutant
    4. Domains for 3r37:
      1. 1201414Domain d3r37a_: 3r37 A: [195707]
        automated match to d1q4ta_
        complexed with 4co; mutant
      2. 1201415Domain d3r37b_: 3r37 B: [195706]
        automated match to d1q4ta_
        complexed with 4co; mutant
    5. Domains for 3r3b:
      1. 1201408Domain d3r3ba_: 3r3b A: [195703]
        automated match to d1q4ta_
        complexed with 4co; mutant
      2. 1201409Domain d3r3bb_: 3r3b B: [195702]
        automated match to d1q4ta_
        complexed with 4co; mutant
    6. Domains for 3r3c:
      1. 1201412Domain d3r3ca_: 3r3c A: [195705]
        automated match to d1q4ta_
        complexed with 4co; mutant
      2. 1201413Domain d3r3cb_: 3r3c B: [195704]
        automated match to d1q4ta_
        complexed with 4co; mutant
    7. Domains for 3r3d:
      1. 1201406Domain d3r3da_: 3r3d A: [195708]
        automated match to d1q4ta_
        complexed with 4co; mutant
      2. 1201407Domain d3r3db_: 3r3d B: [195709]
        automated match to d1q4ta_
        complexed with 4co; mutant
    8. Domains for 3r3f:
      1. 1201402Domain d3r3fa_: 3r3f A: [195711]
        automated match to d1q4ta_
        complexed with 4co; mutant
      2. 1201403Domain d3r3fb_: 3r3f B: [195710]
        automated match to d1q4ta_
        complexed with 4co; mutant
    9. Domain for 3tea:
  2. 1201419Haemophilus influenzae [TaxId:727] [186964] (1 PDB entry)
  3. 1201428Human (Homo sapiens) [TaxId:9606] [187682] (2 PDB entries)
    1. Domains for 2f0x:
      1. 1201437Domain d2f0xb_: 2f0x B: [132674]
        Other proteins in same PDB: d2f0xa1
        automated match to d2f0xa1
        complexed with so4
      2. 1201438Domain d2f0xc_: 2f0x C: [132675]
        Other proteins in same PDB: d2f0xa1
        automated match to d2f0xa1
        complexed with so4
      3. 1201439Domain d2f0xd_: 2f0x D: [132676]
        Other proteins in same PDB: d2f0xa1
        automated match to d2f0xa1
        complexed with so4
      4. 1201440Domain d2f0xe_: 2f0x E: [132677]
        Other proteins in same PDB: d2f0xa1
        automated match to d2f0xa1
        complexed with so4
      5. 1201441Domain d2f0xf_: 2f0x F: [132678]
        Other proteins in same PDB: d2f0xa1
        automated match to d2f0xa1
        complexed with so4
      6. 1201442Domain d2f0xg_: 2f0x G: [132679]
        Other proteins in same PDB: d2f0xa1
        automated match to d2f0xa1
        complexed with so4
      7. 1201443Domain d2f0xh_: 2f0x H: [132680]
        Other proteins in same PDB: d2f0xa1
        automated match to d2f0xa1
        complexed with so4
    2. Domains for 3f5o:
      1. 1201429Domain d3f5oa_: 3f5o A: [175478]
        automated match to d2f0xa1
        complexed with cl, coa, p6g, uoc
      2. 1201430Domain d3f5ob_: 3f5o B: [175479]
        automated match to d2f0xa1
        complexed with cl, coa, p6g, uoc
      3. 1201431Domain d3f5oc_: 3f5o C: [175480]
        automated match to d2f0xa1
        complexed with cl, coa, p6g, uoc
      4. 1201432Domain d3f5od_: 3f5o D: [175481]
        automated match to d2f0xa1
        complexed with cl, coa, p6g, uoc
      5. 1201433Domain d3f5oe_: 3f5o E: [175482]
        automated match to d2f0xa1
        complexed with cl, coa, p6g, uoc
      6. 1201434Domain d3f5of_: 3f5o F: [175483]
        automated match to d2f0xa1
        complexed with cl, coa, p6g, uoc
      7. 1201435Domain d3f5og_: 3f5o G: [175484]
        automated match to d2f0xa1
        complexed with cl, coa, p6g, uoc
      8. 1201436Domain d3f5oh_: 3f5o H: [175485]
        automated match to d2f0xa1
        complexed with cl, coa, p6g, uoc
  4. 1201444Mouse (Mus musculus) [TaxId:10090] [187583] (1 PDB entry)
  5. 1201446Thermus thermophilus [TaxId:300852] [186824] (5 PDB entries)
    1. Domain for 1wlu:
    2. Domains for 1wlv:
      1. 1201450Domain d1wlva_: 1wlv A: [121016]
        automated match to d1j1ya_
        complexed with act, cl, coa
      2. 1201451Domain d1wlvb_: 1wlv B: [121017]
        automated match to d1j1ya_
        complexed with act, cl, coa
      3. 1201452Domain d1wlvc_: 1wlv C: [121018]
        automated match to d1j1ya_
        complexed with act, cl, coa
      4. 1201453Domain d1wlvd_: 1wlv D: [121019]
        automated match to d1j1ya_
        complexed with act, cl, coa
      5. 1201454Domain d1wlve_: 1wlv E: [121020]
        automated match to d1j1ya_
        complexed with act, cl, coa
      6. 1201455Domain d1wlvf_: 1wlv F: [121021]
        automated match to d1j1ya_
        complexed with act, cl, coa
      7. 1201456Domain d1wlvg_: 1wlv G: [121022]
        automated match to d1j1ya_
        complexed with act, cl, coa
      8. 1201457Domain d1wlvh_: 1wlv H: [121023]
        automated match to d1j1ya_
        complexed with act, cl, coa
    3. Domains for 1wm6:
      1. 1201466Domain d1wm6a_: 1wm6 A: [121029]
        automated match to d1j1ya_
        complexed with cl
      2. 1201467Domain d1wm6b_: 1wm6 B: [121030]
        automated match to d1j1ya_
        complexed with cl
      3. 1201468Domain d1wm6c_: 1wm6 C: [121031]
        automated match to d1j1ya_
        complexed with cl
      4. 1201469Domain d1wm6d_: 1wm6 D: [121032]
        automated match to d1j1ya_
        complexed with cl
      5. 1201470Domain d1wm6e_: 1wm6 E: [121033]
        automated match to d1j1ya_
        complexed with cl
      6. 1201471Domain d1wm6f_: 1wm6 F: [121034]
        automated match to d1j1ya_
        complexed with cl
      7. 1201472Domain d1wm6g_: 1wm6 G: [121035]
        automated match to d1j1ya_
        complexed with cl
      8. 1201473Domain d1wm6h_: 1wm6 H: [121036]
        automated match to d1j1ya_
        complexed with cl
    4. Domains for 1wn3:
      1. 1201458Domain d1wn3a_: 1wn3 A: [121074]
        automated match to d1j1ya_
        complexed with act, cl, hxc
      2. 1201459Domain d1wn3b_: 1wn3 B: [121075]
        automated match to d1j1ya_
        complexed with act, cl, hxc
      3. 1201460Domain d1wn3c_: 1wn3 C: [121076]
        automated match to d1j1ya_
        complexed with act, cl, hxc
      4. 1201461Domain d1wn3d_: 1wn3 D: [121077]
        automated match to d1j1ya_
        complexed with act, cl, hxc
      5. 1201462Domain d1wn3e_: 1wn3 E: [121078]
        automated match to d1j1ya_
        complexed with act, cl, hxc
      6. 1201463Domain d1wn3f_: 1wn3 F: [121079]
        automated match to d1j1ya_
        complexed with act, cl, hxc
      7. 1201464Domain d1wn3g_: 1wn3 G: [121080]
        automated match to d1j1ya_
        complexed with act, cl, hxc
      8. 1201465Domain d1wn3h_: 1wn3 H: [121081]
        automated match to d1j1ya_
        complexed with act, cl, hxc
    5. Domains for 2dsl:
      1. 1201448Domain d2dsla_: 2dsl A: [163681]
        automated match to d1j1ya_
        complexed with cl, mg; mutant
      2. 1201449Domain d2dslb_: 2dsl B: [163682]
        automated match to d1j1ya_
        complexed with cl, mg; mutant

More info for Protein automated matches from d.38.1.5: PaaI/YdiI-like

Timeline for Protein automated matches from d.38.1.5: PaaI/YdiI-like: