Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1845072Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 1845073Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families) (S)
    division into families based on beta-sheet topologies
  5. 1845074Family c.37.1.1: Nucleotide and nucleoside kinases [52541] (21 proteins)
    parallel beta-sheet of 5 strands, order 23145
  6. 1845581Protein automated matches [190087] (8 species)
    not a true protein

Species:

  1. 1845582Bacillus subtilis [TaxId:1423] [189093] (1 PDB entry)
  2. 1845585Escherichia coli [TaxId:562] [187701] (2 PDB entries)
    1. Domain for 2fem:
    2. Domain for 2feo:
  3. 1845588Fruit fly (Drosophila melanogaster) [TaxId:7227] [233748] (5 PDB entries)
    1. Domains for 1zm7:
      1. 1845590Domain d1zm7a_: 1zm7 A: [241145]
        automated match to d2vp4d_
        complexed with mg, ttp; mutant
      2. 1845591Domain d1zm7b_: 1zm7 B: [241146]
        automated match to d2vp4d_
        complexed with mg, ttp; mutant
      3. 1845592Domain d1zm7c_: 1zm7 C: [241147]
        automated match to d2vp4d_
        complexed with mg, ttp; mutant
      4. 1845593Domain d1zm7d_: 1zm7 D: [241148]
        automated match to d2vp4d_
        complexed with mg, ttp; mutant
    2. Domains for 1zmx:
      1. 1845604Domain d1zmxa_: 1zmx A: [241149]
        automated match to d2vp4d_
        complexed with so4, thm; mutant
      2. 1845605Domain d1zmxb_: 1zmx B: [241150]
        automated match to d2vp4d_
        complexed with so4, thm; mutant
      3. 1845606Domain d1zmxc_: 1zmx C: [241151]
        automated match to d2vp4d_
        complexed with so4, thm; mutant
      4. 1845607Domain d1zmxd_: 1zmx D: [241152]
        automated match to d2vp4d_
        complexed with so4, thm; mutant
      5. 1845608Domain d1zmxe_: 1zmx E: [241153]
        automated match to d2vp4d_
        complexed with so4, thm; mutant
      6. 1845609Domain d1zmxf_: 1zmx F: [241154]
        automated match to d2vp4d_
        complexed with so4, thm; mutant
      7. 1845610Domain d1zmxg_: 1zmx G: [241155]
        automated match to d2vp4d_
        complexed with so4, thm; mutant
      8. 1845611Domain d1zmxh_: 1zmx H: [241156]
        automated match to d2vp4d_
        complexed with so4, thm; mutant
    3. Domains for 2jcs:
      1. 1845594Domain d2jcsa_: 2jcs A: [242214]
        automated match to d2vp4d_
        complexed with mg, ttp; mutant
      2. 1845595Domain d2jcsb_: 2jcs B: [242215]
        automated match to d2vp4d_
        complexed with mg, ttp; mutant
    4. Domains for 2vp6:
      1. 1845596Domain d2vp6a_: 2vp6 A: [153405]
        automated match to d2vp4d_
        protein/DNA complex; complexed with 5fu, so4
      2. 1845597Domain d2vp6b_: 2vp6 B: [153406]
        automated match to d2vp4d_
        protein/DNA complex; complexed with 5fu, so4
      3. 1845598Domain d2vp6c_: 2vp6 C: [153407]
        automated match to d2vp4d_
        protein/DNA complex; complexed with 5fu, so4
      4. 1845599Domain d2vp6d_: 2vp6 D: [153408]
        automated match to d2vp4d_
        protein/DNA complex; complexed with 5fu, so4
      5. 1845600Domain d2vp6e_: 2vp6 E: [153409]
        automated match to d2vp4d_
        protein/DNA complex; complexed with 5fu, so4
      6. 1845601Domain d2vp6f_: 2vp6 F: [153410]
        automated match to d2vp4d_
        protein/DNA complex; complexed with 5fu, so4
      7. 1845602Domain d2vp6g_: 2vp6 G: [153411]
        automated match to d2vp4d_
        protein/DNA complex; complexed with 5fu, so4
      8. 1845603Domain d2vp6h_: 2vp6 H: [153412]
        automated match to d2vp4d_
        protein/DNA complex; complexed with 5fu, so4
    5. Domain for 3tvt:
  4. 1845612Human (Homo sapiens) [TaxId:9606] [187523] (7 PDB entries)
    1. Domains for 1z83:
      1. 1845616Domain d1z83a_: 1z83 A: [162397]
        automated match to d3adka_
        complexed with ap5, so4, zn
      2. 1845617Domain d1z83b_: 1z83 B: [162398]
        automated match to d3adka_
        complexed with ap5, so4, zn
      3. 1845618Domain d1z83c_: 1z83 C: [162399]
        automated match to d3adka_
        complexed with ap5, so4, zn
    2. Domains for 2c95:
      1. 1845613Domain d2c95a_: 2c95 A: [163334]
        automated match to d3adka_
        complexed with b4p, mli
      2. 1845614Domain d2c95b_: 2c95 B: [163335]
        automated match to d3adka_
        complexed with b4p, mli
    3. Domain for 2xx3:
    4. Domain for 3iij:
    5. Domain for 3iik:
    6. Domain for 3iil:
    7. Domain for 3iim:
  5. 1845623Methanococcus maripaludis [TaxId:39152] [189067] (1 PDB entry)
  6. 1845628Mycobacterium tuberculosis [TaxId:1773] [186809] (11 PDB entries)
    1. Domains for 1w2g:
      1. 1845630Domain d1w2ga_: 1w2g A: [120580]
        automated match to d1g3ua_
        complexed with act, thm
      2. 1845631Domain d1w2gb_: 1w2g B: [120581]
        automated match to d1g3ua_
        complexed with act, thm
    2. Domains for 1w2h:
      1. 1845633Domain d1w2ha_: 1w2h A: [120582]
        automated match to d1g3ua_
        complexed with act, atm
      2. 1845634Domain d1w2hb_: 1w2h B: [120583]
        automated match to d1g3ua_
        complexed with act, atm
    3. Domain for 1znw:
    4. Domain for 1znx:
    5. Domain for 1zny:
    6. Domain for 1znz:
    7. Domains for 4unn:
      1. 1845644Domain d4unna_: 4unn A: [273917]
        automated match to d1w2ga_
        complexed with qzz
      2. 1845645Domain d4unnb_: 4unn B: [273918]
        automated match to d1w2ga_
        complexed with qzz
    8. Domain for 4unp:
    9. Domains for 4unq:
      1. 1845642Domain d4unqa_: 4unq A: [274326]
        automated match to d1w2ga_
        complexed with h6d, na
      2. 1845643Domain d4unqb_: 4unq B: [274327]
        automated match to d1w2ga_
        complexed with h6d, na
    10. Domains for 4unr:
      1. 1845637Domain d4unra_: 4unr A: [273922]
        automated match to d1w2ga_
        complexed with mg, qze
      2. 1845638Domain d4unrb_: 4unr B: [273921]
        automated match to d1w2ga_
        complexed with mg, qze
    11. Domains for 4uns:
      1. 1845640Domain d4unsa_: 4uns A: [273925]
        automated match to d1w2ga_
        complexed with na, qz3
      2. 1845641Domain d4unsb_: 4uns B: [273926]
        automated match to d1w2ga_
        complexed with na, qz3
  7. 1845646Vibrio cholerae [TaxId:243277] [225848] (2 PDB entries)
    1. Domain for 3lv8:
    2. Domains for 3n2i:
      1. 1845648Domain d3n2ia_: 3n2i A: [213676]
        automated match to d4tmka_
        complexed with cl, thm
      2. 1845649Domain d3n2ib_: 3n2i B: [213677]
        automated match to d4tmka_
        complexed with cl, thm
  8. 1845650Yersinia pseudotuberculosis [TaxId:502800] [226541] (1 PDB entry)

More info for Protein automated matches from c.37.1.1: Nucleotide and nucleoside kinases

Timeline for Protein automated matches from c.37.1.1: Nucleotide and nucleoside kinases: