Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2397365Fold b.62: Cyclophilin-like [50890] (1 superfamily)
    barrel, closed; n=8, S=10; complex topology
  4. 2397366Superfamily b.62.1: Cyclophilin-like [50891] (5 families) (S)
  5. 2397367Family b.62.1.1: Cyclophilin (peptidylprolyl isomerase) [50892] (13 protein domains)
    automatically mapped to Pfam PF00160
  6. 2397680Protein automated matches [190077] (18 species)
    not a true protein

Species:

  1. 2397681Aspergillus fumigatus [TaxId:5085] [187014] (1 PDB entry)
  2. 2397683Azotobacter vinelandii [TaxId:322710] [195875] (1 PDB entry)
  3. 2397685Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [186798] (1 PDB entry)
  4. 2397687Blood fluke (Schistosoma mansoni) [TaxId:6183] [187342] (2 PDB entries)
    1. Domain for 2ck1:
    2. Domain for 2cmt:
  5. 2397690Burkholderia pseudomallei [TaxId:320372] [189985] (1 PDB entry)
  6. 2397692Catharanthus roseus [TaxId:4058] [256418] (1 PDB entry)
  7. 2397694Fungus (Encephalitozoon cuniculi) [TaxId:6035] [226758] (1 PDB entry)
  8. 2397699Horse (Equus caballus) [TaxId:9796] [226528] (2 PDB entries)
    1. Domain for 4fru:
    2. Domain for 4frv:
  9. 2397702Human (Homo sapiens) [TaxId:9606] [186915] (15 PDB entries)
    1. Domain for 1zmf:
    2. Domain for 2biu:
    3. Domain for 2gw2:
    4. Domains for 2he9:
      1. 2397712Domain d2he9a1: 2he9 A:7-177 [198001]
        Other proteins in same PDB: d2he9a2, d2he9b2
        automated match to d2he9b_
        complexed with so4
      2. 2397713Domain d2he9b1: 2he9 B:7-177 [193814]
        Other proteins in same PDB: d2he9a2, d2he9b2
        automated match to d2wfia_
        complexed with so4
    5. Domain for 2wfi:
    6. Domain for 2wfj:
    7. Domain for 2x25:
    8. Domain for 2x7k:
    9. Domain for 2xgy:
    10. Domain for 3ich:
    11. Domains for 3ici:
      1. 2397710Domain d3icia1: 3ici A:2-184 [178239]
        Other proteins in same PDB: d3icia2, d3icib2
        automated match to d1cyna_
        complexed with mes, zn
      2. 2397711Domain d3icib1: 3ici B:2-184 [178240]
        Other proteins in same PDB: d3icia2, d3icib2
        automated match to d1cyna_
        complexed with mes, zn
    12. Domain for 3uch:
    13. Domains for 4i9y:
      1. 2397714Domain d4i9ya1: 4i9y A:2-164 [196904]
        Other proteins in same PDB: d4i9ya2, d4i9yb2, d4i9yc2, d4i9yd2, d4i9ye2, d4i9yf2
        automated match to d1m9ea_
        complexed with cl, gol, tla
      2. 2397715Domain d4i9yb1: 4i9y B:2-164 [202596]
        Other proteins in same PDB: d4i9ya2, d4i9yb2, d4i9yc2, d4i9yd2, d4i9ye2, d4i9yf2
        automated match to d4i9ya_
        complexed with cl, gol, tla
      3. 2397716Domain d4i9yc1: 4i9y C:2-164 [202597]
        Other proteins in same PDB: d4i9ya2, d4i9yb2, d4i9yc2, d4i9yd2, d4i9ye2, d4i9yf2
        automated match to d4i9ya_
        complexed with cl, gol, tla
      4. 2397717Domain d4i9yd1: 4i9y D:2-164 [202598]
        Other proteins in same PDB: d4i9ya2, d4i9yb2, d4i9yc2, d4i9yd2, d4i9ye2, d4i9yf2
        automated match to d4i9ya_
        complexed with cl, gol, tla
      5. 2397718Domain d4i9ye1: 4i9y E:2-164 [202599]
        Other proteins in same PDB: d4i9ya2, d4i9yb2, d4i9yc2, d4i9yd2, d4i9ye2, d4i9yf2
        automated match to d4i9ya_
        complexed with cl, gol, tla
      6. 2397719Domain d4i9yf1: 4i9y F:2-164 [202600]
        Other proteins in same PDB: d4i9ya2, d4i9yb2, d4i9yc2, d4i9yd2, d4i9ye2, d4i9yf2
        automated match to d4i9ya_
        complexed with cl, gol, tla
    14. Domains for 4lqw:
      1. 2397720Domain d4lqwa1: 4lqw A:-3-164 [224745]
        Other proteins in same PDB: d4lqwa2, d4lqwb2, d4lqwc_, d4lqwd_
        automated match to d1qoia_
      2. 2397721Domain d4lqwb1: 4lqw B:-3-164 [224746]
        Other proteins in same PDB: d4lqwa2, d4lqwb2, d4lqwc_, d4lqwd_
        automated match to d1qoia_
    15. Domain for 5cbv:
  10. 2397726Leishmania donovani [TaxId:5661] [187796] (4 PDB entries)
    1. Domain for 2haq:
    2. Domain for 3bt8:
    3. Domains for 4s1e:
      1. 2397729Domain d4s1ea_: 4s1e A: [269889]
        automated match to d2haqa_
        mutant
      2. 2397730Domain d4s1eb_: 4s1e B: [269888]
        automated match to d2haqa_
        mutant
    4. Domain for 4s1j:
  11. 2397732Leishmania donovani [TaxId:981087] [269890] (1 PDB entry)
  12. 2397734Leishmania major [TaxId:5664] [187822] (1 PDB entry)
  13. 2397736Moniliophthora perniciosa [TaxId:153609] [189814] (2 PDB entries)
    1. Domain for 3o7t:
    2. Domains for 3pmp:
      1. 2397737Domain d3pmpa_: 3pmp A: [183848]
        automated match to d2cfea1
      2. 2397738Domain d3pmpb_: 3pmp B: [183849]
        automated match to d2cfea1
  14. 2397740Nematode (Brugia malayi) [TaxId:6279] [193907] (1 PDB entry)
  15. 2397742Nematode (Caenorhabditis elegans) [TaxId:6239] [187239] (2 PDB entries)
    1. Domain for 2igv:
    2. Domain for 2igw:
  16. 2397745Piriformospora indica [TaxId:65672] [197083] (1 PDB entry)
  17. 2397749Rhesus monkey (Macaca mulatta) [TaxId:9544] [189056] (4 PDB entries)
    1. Domain for 2wlw:
    2. Domains for 4dga:
      1. 2397752Domain d4dgaa_: 4dga A: [192320]
        Other proteins in same PDB: d4dgac_, d4dgad_
        automated match to d1w8ma_
      2. 2397753Domain d4dgab_: 4dga B: [192321]
        Other proteins in same PDB: d4dgac_, d4dgad_
        automated match to d1w8ma_
    3. Domain for 4dgd:
    4. Domains for 4dge:
      1. 2397754Domain d4dgea_: 4dge A: [219747]
        Other proteins in same PDB: d4dgec_, d4dged_
        automated match to d4dgda_
        mutant
      2. 2397755Domain d4dgeb_: 4dge B: [219748]
        Other proteins in same PDB: d4dgec_, d4dged_
        automated match to d4dgda_
        mutant
  18. 2397756Wheat (Triticum aestivum) [TaxId:4565] [196725] (2 PDB entries)
    1. Domain for 4e1q:
    2. Domain for 4hy7:

More info for Protein automated matches from b.62.1.1: Cyclophilin (peptidylprolyl isomerase)

Timeline for Protein automated matches from b.62.1.1: Cyclophilin (peptidylprolyl isomerase):