Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2142835Fold c.90: Tetrapyrrole methylase [53789] (1 superfamily)
    consists of two non-similar domains
    Domain 1 has parallel sheet of 5 strands, order 32415
    Domain 2 has mixed sheet of 5 strands, order 12534; strands 4 & 5 are antiparallel to the rest
  4. 2142836Superfamily c.90.1: Tetrapyrrole methylase [53790] (2 families) (S)
  5. 2143052Family c.90.1.0: automated matches [191315] (1 protein)
    not a true family
  6. 2143053Protein automated matches [190076] (5 species)
    not a true protein

Species:

  1. 2143054Clostridium difficile [TaxId:272563] [234351] (1 PDB entry)
  2. 2143056Pseudomonas aeruginosa, PA01 [TaxId:208964] [255697] (2 PDB entries)
    1. Domain for 2ybo:
    2. Domain for 2ybq:
  3. 2143059Pyrococcus horikoshii OT3 [TaxId:70601] [186797] (2 PDB entries)
    1. Domain for 1vce:
    2. Domains for 2dek:
      1. 2143060Domain d2deka_: 2dek A: [131430]
        automated match to d1vhva_
        complexed with na, sah
      2. 2143061Domain d2dekb_: 2dek B: [131431]
        automated match to d1vhva_
        complexed with na, sah
  4. 2143063Pyrococcus horikoshii [TaxId:53953] [186827] (1 PDB entry)
  5. 2143066Rhodobacter capsulatus [TaxId:272942] [255976] (2 PDB entries)
    1. Domains for 3ndc:
      1. 2143067Domain d3ndca1: 3ndc A:1-233 [247885]
        Other proteins in same PDB: d3ndca2
        automated match to d2cbfa_
        complexed with sah
      2. 2143068Domain d3ndcb_: 3ndc B: [247886]
        Other proteins in same PDB: d3ndca2
        automated match to d2cbfa_
        complexed with sah
    2. Domains for 3nei:
      1. 2143069Domain d3neia_: 3nei A: [247899]
        automated match to d1cbfa_
        complexed with gol, so4
      2. 2143070Domain d3neib_: 3nei B: [247900]
        automated match to d1cbfa_
        complexed with gol, so4

More info for Protein automated matches from c.90.1.0: automated matches

Timeline for Protein automated matches from c.90.1.0: automated matches: