Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2891301Fold c.61: PRTase-like [53270] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest
  4. 2891302Superfamily c.61.1: PRTase-like [53271] (3 families) (S)
  5. 2891303Family c.61.1.1: Phosphoribosyltransferases (PRTases) [53272] (16 proteins)
  6. 2891731Protein automated matches [190074] (15 species)
    not a true protein

Species:

  1. 2891732Bacillus subtilis [TaxId:1423] [261868] (1 PDB entry)
  2. 2891737Bacillus subtilis [TaxId:224308] [261871] (2 PDB entries)
    1. Domain for 4p82:
    2. Domains for 6w1i:
      1. 2891739Domain d6w1ia1: 6w1i A:2-190 [392846]
        Other proteins in same PDB: d6w1ia2, d6w1ib2, d6w1ic2, d6w1id2
        automated match to d2fxva_
        complexed with g4p, na
      2. 2891740Domain d6w1ib1: 6w1i B:2-192 [392848]
        Other proteins in same PDB: d6w1ia2, d6w1ib2, d6w1ic2, d6w1id2
        automated match to d2fxva_
        complexed with g4p, na
      3. 2891741Domain d6w1ic1: 6w1i C:2-190 [392850]
        Other proteins in same PDB: d6w1ia2, d6w1ib2, d6w1ic2, d6w1id2
        automated match to d2fxva_
        complexed with g4p, na
      4. 2891742Domain d6w1id1: 6w1i D:2-191 [392861]
        Other proteins in same PDB: d6w1ia2, d6w1ib2, d6w1ic2, d6w1id2
        automated match to d2fxva_
        complexed with g4p, na
  3. 2891743Burkholderia pseudomallei [TaxId:28450] [188498] (1 PDB entry)
  4. 2891748Escherichia coli [TaxId:562] [336800] (6 PDB entries)
    1. Domains for 5knr:
      1. 2891759Domain d5knra_: 5knr A: [336908]
        automated match to d1g9sa_
        complexed with 3l5, mg
      2. 2891760Domain d5knrb_: 5knr B: [336841]
        automated match to d1g9sa_
        complexed with 3l5, mg
    2. Domains for 5kns:
      1. 2891753Domain d5knsa_: 5kns A: [336912]
        automated match to d1g9sa_
        complexed with 3l7, epe, mg
      2. 2891754Domain d5knsb_: 5kns B: [336809]
        automated match to d1g9sa_
        complexed with 3l7, epe, mg
    3. Domains for 5knt:
      1. 2891751Domain d5knta_: 5knt A: [336866]
        automated match to d1g9sa_
        complexed with 6wb, epe, mg
      2. 2891752Domain d5kntb_: 5knt B: [336801]
        automated match to d1g9sa_
        complexed with 6wb, epe, mg
    4. Domains for 5knu:
      1. 2891755Domain d5knua_: 5knu A: [336913]
        automated match to d1g9sa_
        complexed with 6wa, epe, mg
      2. 2891756Domain d5knub_: 5knu B: [336807]
        automated match to d1g9sa_
        complexed with 6wa, epe, mg
    5. Domains for 5knv:
      1. 2891757Domain d5knva_: 5knv A: [336808]
        automated match to d1g9sa_
        complexed with 6w9, mg
      2. 2891758Domain d5knvb_: 5knv B: [336812]
        automated match to d1g9sa_
        complexed with 6w9, mg
    6. Domains for 5knx:
      1. 2891749Domain d5knxa_: 5knx A: [336834]
        automated match to d1g9sa_
        complexed with 6wc, mg
      2. 2891750Domain d5knxb_: 5knx B: [336835]
        automated match to d1g9sa_
        complexed with 6wc, mg
  5. 2891761Human (Homo sapiens) [TaxId:9606] [187905] (1 PDB entry)
  6. 2891764Malaria parasite (Plasmodium falciparum) [TaxId:5833] [188472] (1 PDB entry)
  7. 2891767Mycobacterium tuberculosis [TaxId:419947] [315048] (1 PDB entry)
  8. 2891774Plasmodium vivax [TaxId:5855] [328484] (1 PDB entry)
  9. 2891787Thermoanaerobacter tengcongensis [TaxId:119072] [187747] (1 PDB entry)
  10. 2891789Thermus thermophilus HB8 [TaxId:300852] [186795] (1 PDB entry)
  11. 2891793Thermus thermophilus [TaxId:274] [188051] (1 PDB entry)
  12. 2891798Trypanosoma cruzi [TaxId:353153] [314071] (1 PDB entry)
  13. 2891803Vibrio cholerae [TaxId:666] [189453] (1 PDB entry)
  14. 2891808Yersinia pestis [TaxId:632] [353758] (3 PDB entries)
    1. Domains for 5xtk:
      1. 2891813Domain d5xtka_: 5xtk A: [353759]
        automated match to d1nula_
        complexed with 5gp, so4
      2. 2891814Domain d5xtkb_: 5xtk B: [353777]
        automated match to d1nula_
        complexed with 5gp, so4
    2. Domains for 6kp5:
      1. 2891809Domain d6kp5a_: 6kp5 A: [374617]
        automated match to d1a95d_
        complexed with so4
      2. 2891810Domain d6kp5b_: 6kp5 B: [374615]
        automated match to d1a95d_
        complexed with so4
    3. Domains for 6kqc:
      1. 2891811Domain d6kqca_: 6kqc A: [373982]
        automated match to d1a95d_
        complexed with cl, gol; mutant
      2. 2891812Domain d6kqcb_: 6kqc B: [373995]
        automated match to d1a95d_
        complexed with cl, gol; mutant
  15. 3084510Leishmania donovani [TaxId:981087] [420827] (1 PDB entry)

More info for Protein automated matches from c.61.1.1: Phosphoribosyltransferases (PRTases)

Timeline for Protein automated matches from c.61.1.1: Phosphoribosyltransferases (PRTases):