Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2873305Fold c.41: Subtilisin-like [52742] (1 superfamily)
    3 layers: a/b/a, parallel beta-sheet of 7 strands, order 2314567; left-handed crossover connection between strands 2 & 3
  4. 2873306Superfamily c.41.1: Subtilisin-like [52743] (3 families) (S)
  5. 2873307Family c.41.1.1: Subtilases [52744] (15 proteins)
  6. 2873644Protein automated matches [190073] (16 species)
    not a true protein

Species:

  1. 2873645Bacillus amyloliquefaciens [TaxId:1390] [186793] (5 PDB entries)
    1. Domain for 1v5i:
    2. Domain for 3f49:
    3. Domain for 6u9l:
    4. Domain for 7am4:
    5. Domain for 7am5:
  2. 2873651Bacillus clausii [267808] (1 PDB entry)
  3. 2873658Bacillus clausii [TaxId:79880] [267807] (2 PDB entries)
    1. Domains for 2wv7:
      1. 2873665Domain d2wv7a_: 2wv7 A: [264537]
        automated match to d2xrma_
        complexed with na
      2. 2873666Domain d2wv7b_: 2wv7 B: [264538]
        automated match to d2xrma_
        complexed with na
      3. 2873667Domain d2wv7c_: 2wv7 C: [264539]
        automated match to d2xrma_
        complexed with na
      4. 2873668Domain d2wv7d_: 2wv7 D: [264540]
        automated match to d2xrma_
        complexed with na
      5. 2873669Domain d2wv7e_: 2wv7 E: [264541]
        automated match to d2xrma_
        complexed with na
      6. 2873670Domain d2wv7f_: 2wv7 F: [264542]
        automated match to d2xrma_
        complexed with na
    2. Domains for 2x8j:
      1. 2873659Domain d2x8ja_: 2x8j A: [264556]
        automated match to d2xrma_
        complexed with 1pe, gol, na
      2. 2873660Domain d2x8jb_: 2x8j B: [264557]
        automated match to d2xrma_
        complexed with 1pe, gol, na
      3. 2873661Domain d2x8jc_: 2x8j C: [264558]
        automated match to d2xrma_
        complexed with 1pe, gol, na
      4. 2873662Domain d2x8jd_: 2x8j D: [264559]
        automated match to d2xrma_
        complexed with 1pe, gol, na
      5. 2873663Domain d2x8je_: 2x8j E: [264560]
        automated match to d2xrma_
        complexed with 1pe, gol, na
      6. 2873664Domain d2x8jf_: 2x8j F: [264561]
        automated match to d2xrma_
        complexed with 1pe, gol, na
  4. 2873671Bacillus halmapalus [TaxId:79882] [317439] (2 PDB entries)
    1. Domains for 5fax:
      1. 2873674Domain d5faxa1: 5fax A:1-317 [317478]
        Other proteins in same PDB: d5faxa2, d5faxb2
        automated match to d1wmda2
        complexed with ca
      2. 2873675Domain d5faxb1: 5fax B:1-317 [317462]
        Other proteins in same PDB: d5faxa2, d5faxb2
        automated match to d1wmda2
        complexed with ca
    2. Domains for 5fbz:
      1. 2873672Domain d5fbza1: 5fbz A:1-317 [317440]
        Other proteins in same PDB: d5fbza2, d5fbzb_, d5fbzc2, d5fbzd1
        automated match to d1wmda2
        complexed with ca
      2. 2873673Domain d5fbzc1: 5fbz C:1-317 [317445]
        Other proteins in same PDB: d5fbza2, d5fbzb_, d5fbzc2, d5fbzd1
        automated match to d1wmda2
        complexed with ca
  5. 2873676Bacillus lentus [TaxId:1467] [187257] (4 PDB entries)
    1. Domains for 3bx1:
      1. 2873680Domain d3bx1a_: 3bx1 A: [155702]
        Other proteins in same PDB: d3bx1c_, d3bx1d_
        automated match to d1c9ma_
        complexed with ca, cl, na
      2. 2873681Domain d3bx1b_: 3bx1 B: [155703]
        Other proteins in same PDB: d3bx1c_, d3bx1d_
        automated match to d1c9ma_
        complexed with ca, cl, na
    2. Domain for 5arb:
    3. Domain for 5arc:
    4. Domain for 5ard:
  6. 2873682Bacillus licheniformis [TaxId:1402] [186887] (8 PDB entries)
    1. Domain for 1a10:
    2. Domain for 1a1y:
    3. Domains for 1yu6:
      1. 2873684Domain d1yu6a_: 1yu6 A: [124040]
        Other proteins in same PDB: d1yu6c_, d1yu6d_
        automated match to d1af4__
        complexed with ca
      2. 2873685Domain d1yu6b_: 1yu6 B: [124041]
        Other proteins in same PDB: d1yu6c_, d1yu6d_
        automated match to d1af4__
        complexed with ca
    4. Domain for 2wuv:
    5. Domain for 2wuw:
    6. Domains for 3qtl:
      1. 2873692Domain d3qtla_: 3qtl A: [184621]
        automated match to d1af4a_
      2. 2873693Domain d3qtlb_: 3qtl B: [184622]
        automated match to d1af4a_
      3. 2873694Domain d3qtlc_: 3qtl C: [184623]
        automated match to d1af4a_
    7. Domain for 4gi3:
    8. Domains for 4hx2:
      1. 2873690Domain d4hx2a_: 4hx2 A: [192569]
        Other proteins in same PDB: d4hx2b1, d4hx2b2, d4hx2d_
        automated match to d3qtla_
        complexed with 1ax, act, ca, cac, cl, gol, ipa, k, po4, zn
      2. 2873691Domain d4hx2c_: 4hx2 C: [192838]
        Other proteins in same PDB: d4hx2b1, d4hx2b2, d4hx2d_
        automated match to d3qtla_
        complexed with 1ax, act, ca, cac, cl, gol, ipa, k, po4, zn
  7. 2873695Bacillus sp. [TaxId:1409] [317459] (1 PDB entry)
  8. 2873697Bacillus sphaericus [TaxId:1421] [188865] (2 PDB entries)
    1. Domains for 2ixt:
      1. 2873698Domain d2ixta_: 2ixt A: [147828]
        automated match to d1ea7a_
        complexed with ca
      2. 2873699Domain d2ixtb_: 2ixt B: [147829]
        automated match to d1ea7a_
        complexed with ca
    2. Domains for 3d43:
      1. 2873700Domain d3d43a_: 3d43 A: [173669]
        automated match to d1ea7a_
        complexed with ca
      2. 2873701Domain d3d43b_: 3d43 B: [173670]
        automated match to d1ea7a_
        complexed with ca
  9. 2873702Bacillus subtilis [TaxId:1423] [187756] (2 PDB entries)
    1. Domain for 2gko:
    2. Domains for 6o44:
      1. 2873704Domain d6o44a1: 6o44 A:1-275 [367595]
        Other proteins in same PDB: d6o44a2, d6o44b2
        automated match to d1scja_
        complexed with ca, edo, so4
      2. 2873705Domain d6o44b1: 6o44 B:1-275 [367536]
        Other proteins in same PDB: d6o44a2, d6o44b2
        automated match to d1scja_
        complexed with ca, edo, so4
  10. 2873706Bacillus subtilis [TaxId:224308] [376099] (1 PDB entry)
  11. 2873709Bacillus subtilis [TaxId:86029] [195839] (3 PDB entries)
    1. Domains for 3vyv:
      1. 2873710Domain d3vyva_: 3vyv A: [228278]
        automated match to d4dwwa_
        complexed with ca, gol
      2. 2873711Domain d3vyvb_: 3vyv B: [228279]
        automated match to d4dwwa_
        complexed with ca, gol
    2. Domain for 4dww:
    3. Domains for 5gl8:
      1. 2873713Domain d5gl8a_: 5gl8 A: [340436]
        automated match to d3vyva_
        complexed with ca
      2. 2873714Domain d5gl8b_: 5gl8 B: [340440]
        automated match to d3vyva_
        complexed with ca
  12. 2873715Engyodontium album [TaxId:37998] [187057] (27 PDB entries)
    1. Domain for 2dp4:
    2. Domain for 2dqk:
    3. Domain for 2duj:
    4. Domain for 2g4v:
    5. Domain for 2hd4:
    6. Domain for 2hpz:
    7. Domain for 2id8:
    8. Domain for 2pq2:
    9. Domain for 2pwa:
    10. Domain for 2pwb:
    11. Domain for 2pyz:
    12. Domain for 3d9q:
    13. Domain for 3ddz:
    14. Domain for 3de0:
    15. Domain for 3de1:
    16. Domain for 3de2:
    17. Domain for 3de3:
    18. Domain for 3de4:
    19. Domain for 3de5:
    20. Domain for 3de6:
    21. Domain for 3de7:
    22. Domain for 3dyb:
    23. Domain for 3gt3:
    24. Domain for 3gt4:
    25. Domain for 3osz:
    26. Domain for 3ptl:
    27. Domain for 3q5g:
  13. 2873743Human (Homo sapiens) [TaxId:9606] [238473] (13 PDB entries)
    1. Domain for 2pmw:
    2. Domain for 3h42:
    3. Domains for 4omc:
      1. 2873754Domain d4omca1: 4omc A:109-442 [238478]
        Other proteins in same PDB: d4omca2, d4omcb2, d4omcc2, d4omcd2, d4omce2, d4omcf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      2. 2873755Domain d4omcb1: 4omc B:110-442 [263315]
        Other proteins in same PDB: d4omca2, d4omcb2, d4omcc2, d4omcd2, d4omce2, d4omcf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      3. 2873756Domain d4omcc1: 4omc C:109-442 [238475]
        Other proteins in same PDB: d4omca2, d4omcb2, d4omcc2, d4omcd2, d4omce2, d4omcf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      4. 2873757Domain d4omcd1: 4omc D:110-442 [238474]
        Other proteins in same PDB: d4omca2, d4omcb2, d4omcc2, d4omcd2, d4omce2, d4omcf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      5. 2873758Domain d4omce1: 4omc E:110-442 [263317]
        Other proteins in same PDB: d4omca2, d4omcb2, d4omcc2, d4omcd2, d4omce2, d4omcf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      6. 2873759Domain d4omcf1: 4omc F:110-442 [263319]
        Other proteins in same PDB: d4omca2, d4omcb2, d4omcc2, d4omcd2, d4omce2, d4omcf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
    4. Domains for 4omd:
      1. 2873766Domain d4omda1: 4omd A:109-442 [267072]
        Other proteins in same PDB: d4omda2, d4omdb2, d4omdc2, d4omdd2, d4omde2, d4omdf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      2. 2873767Domain d4omdb1: 4omd B:110-442 [267074]
        Other proteins in same PDB: d4omda2, d4omdb2, d4omdc2, d4omdd2, d4omde2, d4omdf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      3. 2873768Domain d4omdc1: 4omd C:109-442 [267076]
        Other proteins in same PDB: d4omda2, d4omdb2, d4omdc2, d4omdd2, d4omde2, d4omdf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      4. 2873769Domain d4omdd1: 4omd D:110-442 [267078]
        Other proteins in same PDB: d4omda2, d4omdb2, d4omdc2, d4omdd2, d4omde2, d4omdf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      5. 2873770Domain d4omde1: 4omd E:110-442 [267080]
        Other proteins in same PDB: d4omda2, d4omdb2, d4omdc2, d4omdd2, d4omde2, d4omdf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      6. 2873771Domain d4omdf1: 4omd F:110-442 [267082]
        Other proteins in same PDB: d4omda2, d4omdb2, d4omdc2, d4omdd2, d4omde2, d4omdf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
    5. Domains for 4ryd:
      1. 2873760Domain d4ryda1: 4ryd A:109-442 [273179]
        Other proteins in same PDB: d4ryda2, d4rydb2, d4rydc2, d4rydd2, d4ryde2, d4rydf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      2. 2873761Domain d4rydb1: 4ryd B:110-442 [273173]
        Other proteins in same PDB: d4ryda2, d4rydb2, d4rydc2, d4rydd2, d4ryde2, d4rydf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      3. 2873762Domain d4rydc1: 4ryd C:109-442 [273177]
        Other proteins in same PDB: d4ryda2, d4rydb2, d4rydc2, d4rydd2, d4ryde2, d4rydf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      4. 2873763Domain d4rydd1: 4ryd D:110-442 [273175]
        Other proteins in same PDB: d4ryda2, d4rydb2, d4rydc2, d4rydd2, d4ryde2, d4rydf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      5. 2873764Domain d4ryde1: 4ryd E:110-442 [273181]
        Other proteins in same PDB: d4ryda2, d4rydb2, d4rydc2, d4rydd2, d4ryde2, d4rydf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
      6. 2873765Domain d4rydf1: 4ryd F:110-442 [273184]
        Other proteins in same PDB: d4ryda2, d4rydb2, d4rydc2, d4rydd2, d4ryde2, d4rydf2
        automated match to d1p8ja2
        complexed with ca, fmt, na
    6. Domain for 4z2a:
    7. Domain for 5jxg:
    8. Domain for 5jxi:
    9. Domain for 5mim:
    10. Domain for 6yd2:
    11. Domain for 6yd3:
    12. Domain for 6yd4:
    13. Domain for 6yd7:
  14. 2873772Lecanicillium psalliotae [TaxId:73499] [189114] (1 PDB entry)
  15. 2873774Pseudoalteromonas sp. [TaxId:247492] [188095] (2 PDB entries)
    1. Domains for 1wvm:
      1. 2873777Domain d1wvma_: 1wvm A: [161997]
        automated match to d1v6cb_
        complexed with ca, mg
      2. 2873778Domain d1wvmb_: 1wvm B: [161998]
        automated match to d1v6cb_
        complexed with ca, mg
    2. Domains for 1y9z:
      1. 2873775Domain d1y9za_: 1y9z A: [162172]
        automated match to d1v6cb_
        complexed with ca, na, pms, so4, trs
      2. 2873776Domain d1y9zb_: 1y9z B: [162173]
        automated match to d1v6cb_
        complexed with ca, na, pms, so4, trs
  16. 2873779Tritirachium album [TaxId:37998] [187258] (13 PDB entries)
    1. Domain for 2v8b:
    2. Domain for 3aj8:
    3. Domain for 3aj9:
    4. Domain for 3dvq:
    5. Domain for 3dvr:
    6. Domain for 3dvs:
    7. Domain for 3dw1:
    8. Domain for 3dw3:
    9. Domain for 3dwe:
    10. Domain for 3i2y:
    11. Domain for 3i30:
    12. Domain for 3i34:
    13. Domain for 3i37:

More info for Protein automated matches from c.41.1.1: Subtilases

Timeline for Protein automated matches from c.41.1.1: Subtilases: