Class c: Alpha and beta proteins (a/b) [51349] (147 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) |
Family c.1.8.3: beta-glycanases [51487] (27 proteins) consist of a number of sequence families |
Protein automated matches [190057] (15 species) not a true protein |
Bacillus agaradhaerens [TaxId:76935] [187246] (1 PDB entry) |
Domain d2v38a_: 2v38 A: [152442] automated match to d1e5ja_ complexed with gol, idr, ifl, so4 |
Bacillus halodurans [TaxId:86665] [188453] (1 PDB entry) |
Domain d2uwfa_: 2uwf A: [168200] automated match to d1hiza_ complexed with ca, cu |
Bacillus licheniformis [TaxId:1402] [187025] (3 PDB entries) |
Domain d2ccrb_: 2ccr B: [130254] Other proteins in same PDB: d2ccra1 automated match to d1ur0b_ complexed with b2g, b4g, ca, pge |
Domain d2gfta_: 2gft A: [164682] automated match to d1ur0b_ complexed with ca; mutant |
Domain d2gftb_: 2gft B: [164683] automated match to d1ur0b_ complexed with ca; mutant |
Domain d2j74a_: 2j74 A: [147901] automated match to d1ur0b_ complexed with b2g, b4g, ca |
Domain d2j74b_: 2j74 B: [147902] automated match to d1ur0b_ complexed with b2g, b4g, ca |
Bacillus sp. [TaxId:65673] [187690] (2 PDB entries) |
Domain d2f8qa_: 2f8q A: [164282] automated match to d1hiza_ complexed with mg |
Domain d2f8qb_: 2f8q B: [164283] automated match to d1hiza_ complexed with mg |
Domain d2fgla_: 2fgl A: [164353] automated match to d1hiza_ complexed with lxc, mg |
Domain d2fglb_: 2fgl B: [164354] automated match to d1hiza_ complexed with lxc, mg |
Bacillus sp. [TaxId:89769] [189058] (3 PDB entries) |
Domain d3emca_: 3emc A: [175085] automated match to d1n82a_ complexed with mpd |
Domain d3emqa_: 3emq A: [175089] automated match to d1n82a_ complexed with hah |
Domain d3emza_: 3emz A: [175094] automated match to d1n82a_ complexed with hxh |
Cellulomonas fimi [TaxId:1708] [231537] (1 PDB entry) |
Domain d2x2ya1: 2x2y A:4-370 [231538] Other proteins in same PDB: d2x2ya2, d2x2yb2 automated match to d2bvta2 complexed with fmt, mg; mutant |
Domain d2x2yb1: 2x2y B:4-370 [231541] Other proteins in same PDB: d2x2ya2, d2x2yb2 automated match to d2bvta2 complexed with fmt, mg; mutant |
Clostridium thermocellum [TaxId:1515] [187247] (4 PDB entries) |
Domain d2bvda_: 2bvd A: [129255] automated match to d2bv9a1 complexed with isx |
Domain d2cipa_: 2cip A: [163418] automated match to d2bv9a1 complexed with zz1 |
Domain d2v3ga_: 2v3g A: [152457] automated match to d2bv9a1 complexed with bgc, noy |
Domain d2vi0a_: 2vi0 A: [168620] automated match to d2bv9a1 complexed with vam |
Emericella nidulans [TaxId:162425] [226738] (1 PDB entry) |
Domain d4bf7a_: 4bf7 A: [219463] automated match to d1foba_ complexed with act, gol, imd, nag, zn |
Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId:155077] [188920] (1 PDB entry) |
Domain d2whma_: 2whm A: [169352] automated match to d1odza_ complexed with na, trs, zn; mutant |
Rubber tree (Hevea brasiliensis) [TaxId:3981] [189057] (4 PDB entries) |
Domain d3em5a_: 3em5 A: [175079] automated match to d2cyga1 complexed with nag, peg |
Domain d3em5b_: 3em5 B: [175080] automated match to d2cyga1 complexed with nag, peg |
Domain d3em5c_: 3em5 C: [175081] automated match to d2cyga1 complexed with nag, peg |
Domain d3em5d_: 3em5 D: [175082] automated match to d2cyga1 complexed with nag, peg |
Domain d3f55a_: 3f55 A: [175473] automated match to d2cyga1 complexed with cac, flc, nag |
Domain d3f55b_: 3f55 B: [175474] automated match to d2cyga1 complexed with cac, flc, nag |
Domain d3f55c_: 3f55 C: [175475] automated match to d2cyga1 complexed with cac, flc, nag |
Domain d3f55d_: 3f55 D: [175476] automated match to d2cyga1 complexed with cac, flc, nag |
Domain d4hpga_: 4hpg A: [229225] automated match to d3em5a_ complexed with nag, peg |
Domain d4hpgb_: 4hpg B: [229227] automated match to d3em5a_ complexed with nag, peg |
Domain d4hpgc_: 4hpg C: [229228] automated match to d3em5a_ complexed with nag, peg |
Domain d4hpgd_: 4hpg D: [229224] automated match to d3em5a_ complexed with nag, peg |
Domain d4iisa_: 4iis A: [229244] automated match to d3em5a_ complexed with cac, flc, na |
Domain d4iisb_: 4iis B: [229245] automated match to d3em5a_ complexed with cac, flc, na |
Domain d4iisc_: 4iis C: [229246] automated match to d3em5a_ complexed with cac, flc, na |
Domain d4iisd_: 4iis D: [229243] automated match to d3em5a_ complexed with cac, flc, na |
Soil metagenome [TaxId:410658] [236610] (1 PDB entry) |
Domain d4m1ra_: 4m1r A: [236612] automated match to d1egza_ complexed with trs |
Domain d4m1rb_: 4m1r B: [236611] automated match to d1egza_ complexed with trs |
Streptomyces olivaceoviridis [TaxId:1921] [225150] (8 PDB entries) |
Domain d2d1za1: 2d1z A:1-301 [203861] Other proteins in same PDB: d2d1za2, d2d1zb2 automated match to d1xyfa2 complexed with gol, so4; mutant |
Domain d2d1zb1: 2d1z B:501-801 [203863] Other proteins in same PDB: d2d1za2, d2d1zb2 automated match to d1xyfa2 complexed with gol, so4; mutant |
Domain d2d20a1: 2d20 A:1-301 [203865] Other proteins in same PDB: d2d20a2, d2d20b2 automated match to d1xyfa2 complexed with gol, npo; mutant |
Domain d2d20b1: 2d20 B:501-801 [203867] Other proteins in same PDB: d2d20a2, d2d20b2 automated match to d1xyfa2 complexed with gol, npo; mutant |
Domain d2d22a1: 2d22 A:1-301 [203869] Other proteins in same PDB: d2d22a2, d2d22b2 automated match to d1xyfa2 complexed with gol, so4; mutant |
Domain d2d22b1: 2d22 B:501-801 [203871] Other proteins in same PDB: d2d22a2, d2d22b2 automated match to d1xyfa2 complexed with gol, so4; mutant |
Domain d2d23a1: 2d23 A:1-301 [203873] Other proteins in same PDB: d2d23a2, d2d23b2 automated match to d1xyfa2 complexed with gol; mutant |
Domain d2d23b1: 2d23 B:501-801 [203875] Other proteins in same PDB: d2d23a2, d2d23b2 automated match to d1xyfa2 complexed with gol; mutant |
Domain d2d24a1: 2d24 A:1-301 [203877] Other proteins in same PDB: d2d24a2, d2d24b2 automated match to d1xyfa2 complexed with gol, so4; mutant |
Domain d2d24b1: 2d24 B:501-801 [203879] Other proteins in same PDB: d2d24a2, d2d24b2 automated match to d1xyfa2 complexed with gol, so4; mutant |
Domain d2g3ia_: 2g3i A: [204289] automated match to d1e0xa_ complexed with po4; mutant |
Domain d2g3ja_: 2g3j A: [204290] automated match to d1e0xa_ complexed with po4; mutant |
Domain d2g4fa_: 2g4f A: [204297] automated match to d1e0xa_ mutant |
Domain d2g4fb_: 2g4f B: [204298] automated match to d1e0xa_ mutant |
Thermoascus aurantiacus [TaxId:5087] [190006] (3 PDB entries) |
Domain d3nyda_: 3nyd A: [182626] automated match to d1goka_ complexed with 3ny, act, so4 |
Domain d3nydb_: 3nyd B: [182627] automated match to d1goka_ complexed with 3ny, act, so4 |
Domain d3o2la_: 3o2l A: [193689] automated match to d1goka_ |
Domain d4bs0a_: 4bs0 A: [228291] automated match to d1goka_ complexed with 6nt, so4 |
Domain d4bs0b_: 4bs0 B: [234278] automated match to d4bs0a_ complexed with 6nt, so4 |
Thermotoga petrophila [TaxId:390874] [189941] (2 PDB entries) |
Domain d3niya_: 3niy A: [182330] automated match to d1vbra1 complexed with act, so4 |
Domain d3niyb_: 3niy B: [182331] automated match to d1vbra1 complexed with act, so4 |
Domain d3nj3a_: 3nj3 A: [182333] automated match to d1vbra1 complexed with act, so4, xyp |
Domain d3nj3b_: 3nj3 B: [182334] automated match to d1vbra1 complexed with act, so4, xyp |
Yeast (Candida albicans) [TaxId:5476] [188406] (5 PDB entries) |
Domain d2pboa_: 2pbo A: [167113] automated match to d1cz1a_ mutant |
Domain d2pc8a_: 2pc8 A: [167118] automated match to d1cz1a_ complexed with bgc; mutant |
Domain d2pf0a_: 2pf0 A: [167163] automated match to d1cz1a_ mutant |
Domain d3n9ka_: 3n9k A: [182094] automated match to d1cz1a_ complexed with ca; mutant |
Domain d3o6aa_: 3o6a A: [182833] automated match to d1cz1a_ mutant |
Timeline for Protein automated matches from c.1.8.3: beta-glycanases: