Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1449807Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)
  3. 1451042Fold e.5: Heme-dependent catalase-like [56633] (1 superfamily)
    contains an (8,10) beta-barrel and an all-alpha domain
  4. 1451043Superfamily e.5.1: Heme-dependent catalase-like [56634] (3 families) (S)
  5. 1451044Family e.5.1.1: Heme-dependent catalases [56635] (3 proteins)
  6. 1451194Protein automated matches [190051] (6 species)
    not a true protein

Species:

  1. 1451195Cow (Bos taurus) [TaxId:9913] [186772] (5 PDB entries)
    1. Domains for 1tgu:
      1. 1451204Domain d1tgua_: 1tgu A: [119243]
        automated match to d1qqwb_
        complexed with hem
      2. 1451205Domain d1tgub_: 1tgu B: [119244]
        automated match to d1qqwb_
        complexed with hem
      3. 1451206Domain d1tguc_: 1tgu C: [119245]
        automated match to d1qqwb_
        complexed with hem
      4. 1451207Domain d1tgud_: 1tgu D: [119246]
        automated match to d1qqwb_
        complexed with hem
    2. Domains for 1th2:
      1. 1451208Domain d1th2a_: 1th2 A: [119251]
        automated match to d1qqwb_
        complexed with azi, hem
      2. 1451209Domain d1th2b_: 1th2 B: [119252]
        automated match to d1qqwb_
        complexed with azi, hem
      3. 1451210Domain d1th2c_: 1th2 C: [119253]
        automated match to d1qqwb_
        complexed with azi, hem
      4. 1451211Domain d1th2d_: 1th2 D: [119254]
        automated match to d1qqwb_
        complexed with azi, hem
    3. Domains for 1th3:
      1. 1451200Domain d1th3a_: 1th3 A: [119255]
        automated match to d1qqwb_
        complexed with cyn, hem
      2. 1451201Domain d1th3b_: 1th3 B: [119256]
        automated match to d1qqwb_
        complexed with cyn, hem
      3. 1451202Domain d1th3c_: 1th3 C: [119257]
        automated match to d1qqwb_
        complexed with cyn, hem
      4. 1451203Domain d1th3d_: 1th3 D: [119258]
        automated match to d1qqwb_
        complexed with cyn, hem
    4. Domains for 1th4:
      1. 1451212Domain d1th4a_: 1th4 A: [119259]
        automated match to d1qqwb_
        complexed with 3tr, hem
      2. 1451213Domain d1th4b_: 1th4 B: [119260]
        automated match to d1qqwb_
        complexed with 3tr, hem
      3. 1451214Domain d1th4c_: 1th4 C: [119261]
        automated match to d1qqwb_
        complexed with 3tr, hem
      4. 1451215Domain d1th4d_: 1th4 D: [119262]
        automated match to d1qqwb_
        complexed with 3tr, hem
    5. Domains for 3nwl:
      1. 1451196Domain d3nwla_: 3nwl A: [214065]
        automated match to d1qqwb_
        complexed with hem, ndp
      2. 1451197Domain d3nwlb_: 3nwl B: [214066]
        automated match to d1qqwb_
        complexed with hem, ndp
      3. 1451198Domain d3nwlc_: 3nwl C: [214067]
        automated match to d1qqwb_
        complexed with hem, ndp
      4. 1451199Domain d3nwld_: 3nwl D: [214068]
        automated match to d1qqwb_
        complexed with hem, ndp
  2. 1451216Escherichia coli [TaxId:562] [233717] (5 PDB entries)
    1. Domains for 3ttt:
      1. 1451220Domain d3ttta1: 3ttt A:28-597 [233719]
        Other proteins in same PDB: d3ttta2, d3tttb2, d3tttc2, d3tttd2
        automated match to d1cf9a2
        complexed with hem
      2. 1451221Domain d3tttb1: 3ttt B:28-597 [233720]
        Other proteins in same PDB: d3ttta2, d3tttb2, d3tttc2, d3tttd2
        automated match to d1cf9a2
        complexed with hem
      3. 1451222Domain d3tttc1: 3ttt C:28-597 [233723]
        Other proteins in same PDB: d3ttta2, d3tttb2, d3tttc2, d3tttd2
        automated match to d1cf9a2
        complexed with hem
      4. 1451223Domain d3tttd1: 3ttt D:28-597 [233725]
        Other proteins in same PDB: d3ttta2, d3tttb2, d3tttc2, d3tttd2
        automated match to d1cf9a2
        complexed with hem
    2. Domains for 3ttu:
      1. 1451226Domain d3ttua1: 3ttu A:28-597 [233729]
        Other proteins in same PDB: d3ttua2, d3ttub2
        automated match to d1cf9a2
        complexed with hem
      2. 1451227Domain d3ttub1: 3ttu B:28-597 [233727]
        Other proteins in same PDB: d3ttua2, d3ttub2
        automated match to d1cf9a2
        complexed with hem
    3. Domains for 3ttv:
      1. 1451217Domain d3ttva1: 3ttv A:28-597 [233731]
        Other proteins in same PDB: d3ttva2, d3ttvb2, d3ttvc2
        automated match to d1cf9a2
        complexed with hem
      2. 1451218Domain d3ttvb1: 3ttv B:28-597 [233733]
        Other proteins in same PDB: d3ttva2, d3ttvb2, d3ttvc2
        automated match to d1cf9a2
        complexed with hem
      3. 1451219Domain d3ttvc1: 3ttv C:28-597 [233734]
        Other proteins in same PDB: d3ttva2, d3ttvb2, d3ttvc2
        automated match to d1cf9a2
        complexed with hem
    4. Domain for 3ttw:
    5. Domain for 3ttx:
  3. 1451228Escherichia coli [TaxId:83333] [226042] (12 PDB entries)
    1. Domains for 3p9p:
      1. 1451237Domain d3p9pa1: 3p9p A:28-597 [233162]
        Other proteins in same PDB: d3p9pa2, d3p9pb2, d3p9pc2, d3p9pd2
        automated match to d1cf9a2
        complexed with hdd, hde, hem
      2. 1451238Domain d3p9pb1: 3p9p B:28-597 [233164]
        Other proteins in same PDB: d3p9pa2, d3p9pb2, d3p9pc2, d3p9pd2
        automated match to d1cf9a2
        complexed with hdd, hde, hem
      3. 1451239Domain d3p9pc1: 3p9p C:28-597 [233165]
        Other proteins in same PDB: d3p9pa2, d3p9pb2, d3p9pc2, d3p9pd2
        automated match to d1cf9a2
        complexed with hdd, hde, hem
      4. 1451240Domain d3p9pd1: 3p9p D:28-597 [233163]
        Other proteins in same PDB: d3p9pa2, d3p9pb2, d3p9pc2, d3p9pd2
        automated match to d1cf9a2
        complexed with hdd, hde, hem
    2. Domains for 3p9q:
      1. 1451229Domain d3p9qa1: 3p9q A:28-597 [233166]
        Other proteins in same PDB: d3p9qa2, d3p9qb2, d3p9qc2, d3p9qd2
        automated match to d1cf9a2
        complexed with h2s, hdd, hde
      2. 1451230Domain d3p9qb1: 3p9q B:28-597 [233167]
        Other proteins in same PDB: d3p9qa2, d3p9qb2, d3p9qc2, d3p9qd2
        automated match to d1cf9a2
        complexed with h2s, hdd, hde
      3. 1451231Domain d3p9qc1: 3p9q C:28-597 [233168]
        Other proteins in same PDB: d3p9qa2, d3p9qb2, d3p9qc2, d3p9qd2
        automated match to d1cf9a2
        complexed with h2s, hdd, hde
      4. 1451232Domain d3p9qd1: 3p9q D:28-597 [233169]
        Other proteins in same PDB: d3p9qa2, d3p9qb2, d3p9qc2, d3p9qd2
        automated match to d1cf9a2
        complexed with h2s, hdd, hde
    3. Domains for 3p9r:
      1. 1451261Domain d3p9ra1: 3p9r A:28-597 [233170]
        Other proteins in same PDB: d3p9ra2, d3p9rb2, d3p9rc2, d3p9rd2
        automated match to d1cf9a2
        complexed with hdd
      2. 1451262Domain d3p9rb1: 3p9r B:28-597 [233171]
        Other proteins in same PDB: d3p9ra2, d3p9rb2, d3p9rc2, d3p9rd2
        automated match to d1cf9a2
        complexed with hdd
      3. 1451263Domain d3p9rc1: 3p9r C:28-597 [233172]
        Other proteins in same PDB: d3p9ra2, d3p9rb2, d3p9rc2, d3p9rd2
        automated match to d1cf9a2
        complexed with hdd
      4. 1451264Domain d3p9rd1: 3p9r D:28-597 [233173]
        Other proteins in same PDB: d3p9ra2, d3p9rb2, d3p9rc2, d3p9rd2
        automated match to d1cf9a2
        complexed with hdd
    4. Domain for 3p9s:
    5. Domains for 4enp:
      1. 1451233Domain d4enpa1: 4enp A:28-597 [220689]
        Other proteins in same PDB: d4enpa2, d4enpb2, d4enpc2, d4enpd2
        automated match to d1cf9a2
        complexed with hem
      2. 1451234Domain d4enpb1: 4enp B:28-597 [220691]
        Other proteins in same PDB: d4enpa2, d4enpb2, d4enpc2, d4enpd2
        automated match to d1cf9a2
        complexed with hem
      3. 1451235Domain d4enpc1: 4enp C:28-597 [220693]
        Other proteins in same PDB: d4enpa2, d4enpb2, d4enpc2, d4enpd2
        automated match to d1cf9a2
        complexed with hem
      4. 1451236Domain d4enpd1: 4enp D:28-597 [220695]
        Other proteins in same PDB: d4enpa2, d4enpb2, d4enpc2, d4enpd2
        automated match to d1cf9a2
        complexed with hem
    6. Domains for 4enq:
      1. 1451270Domain d4enqa1: 4enq A:29-597 [220697]
        Other proteins in same PDB: d4enqa2, d4enqb2, d4enqc2, d4enqd2
        automated match to d1cf9a2
        complexed with hdd
      2. 1451271Domain d4enqb1: 4enq B:29-597 [220699]
        Other proteins in same PDB: d4enqa2, d4enqb2, d4enqc2, d4enqd2
        automated match to d1cf9a2
        complexed with hdd
      3. 1451272Domain d4enqc1: 4enq C:29-597 [220701]
        Other proteins in same PDB: d4enqa2, d4enqb2, d4enqc2, d4enqd2
        automated match to d1cf9a2
        complexed with hdd
      4. 1451273Domain d4enqd1: 4enq D:29-597 [220703]
        Other proteins in same PDB: d4enqa2, d4enqb2, d4enqc2, d4enqd2
        automated match to d1cf9a2
        complexed with hdd
    7. Domains for 4enr:
      1. 1451245Domain d4enra1: 4enr A:28-597 [220705]
        Other proteins in same PDB: d4enra2, d4enrb2, d4enrc2, d4enrd2
        automated match to d1cf9a2
        complexed with hem
      2. 1451246Domain d4enrb1: 4enr B:28-597 [220707]
        Other proteins in same PDB: d4enra2, d4enrb2, d4enrc2, d4enrd2
        automated match to d1cf9a2
        complexed with hem
      3. 1451247Domain d4enrc1: 4enr C:28-597 [220709]
        Other proteins in same PDB: d4enra2, d4enrb2, d4enrc2, d4enrd2
        automated match to d1cf9a2
        complexed with hem
      4. 1451248Domain d4enrd1: 4enr D:28-597 [220711]
        Other proteins in same PDB: d4enra2, d4enrb2, d4enrc2, d4enrd2
        automated match to d1cf9a2
        complexed with hem
    8. Domains for 4ens:
      1. 1451241Domain d4ensa1: 4ens A:28-597 [220713]
        Other proteins in same PDB: d4ensa2, d4ensb2, d4ensc2, d4ensd2
        automated match to d1cf9a2
        complexed with hdd, hem
      2. 1451242Domain d4ensb1: 4ens B:28-597 [220715]
        Other proteins in same PDB: d4ensa2, d4ensb2, d4ensc2, d4ensd2
        automated match to d1cf9a2
        complexed with hdd, hem
      3. 1451243Domain d4ensc1: 4ens C:28-597 [220717]
        Other proteins in same PDB: d4ensa2, d4ensb2, d4ensc2, d4ensd2
        automated match to d1cf9a2
        complexed with hdd, hem
      4. 1451244Domain d4ensd1: 4ens D:28-597 [220719]
        Other proteins in same PDB: d4ensa2, d4ensb2, d4ensc2, d4ensd2
        automated match to d1cf9a2
        complexed with hdd, hem
    9. Domains for 4ent:
      1. 1451253Domain d4enta1: 4ent A:28-597 [220721]
        Other proteins in same PDB: d4enta2, d4entb2, d4entc2, d4entd2
        automated match to d1cf9a2
        complexed with hdd, hem
      2. 1451254Domain d4entb1: 4ent B:28-597 [220723]
        Other proteins in same PDB: d4enta2, d4entb2, d4entc2, d4entd2
        automated match to d1cf9a2
        complexed with hdd, hem
      3. 1451255Domain d4entc1: 4ent C:28-597 [220725]
        Other proteins in same PDB: d4enta2, d4entb2, d4entc2, d4entd2
        automated match to d1cf9a2
        complexed with hdd, hem
      4. 1451256Domain d4entd1: 4ent D:28-597 [220727]
        Other proteins in same PDB: d4enta2, d4entb2, d4entc2, d4entd2
        automated match to d1cf9a2
        complexed with hdd, hem
    10. Domains for 4enu:
      1. 1451249Domain d4enua1: 4enu A:28-597 [220729]
        Other proteins in same PDB: d4enua2, d4enub2, d4enuc2, d4enud2
        automated match to d1cf9a2
        complexed with hdd
      2. 1451250Domain d4enub1: 4enu B:28-597 [220731]
        Other proteins in same PDB: d4enua2, d4enub2, d4enuc2, d4enud2
        automated match to d1cf9a2
        complexed with hdd
      3. 1451251Domain d4enuc1: 4enu C:28-597 [220733]
        Other proteins in same PDB: d4enua2, d4enub2, d4enuc2, d4enud2
        automated match to d1cf9a2
        complexed with hdd
      4. 1451252Domain d4enud1: 4enu D:28-597 [220735]
        Other proteins in same PDB: d4enua2, d4enub2, d4enuc2, d4enud2
        automated match to d1cf9a2
        complexed with hdd
    11. Domains for 4env:
      1. 1451257Domain d4enva1: 4env A:28-597 [220737]
        Other proteins in same PDB: d4enva2, d4envb2, d4envc2, d4envd2
        automated match to d1cf9a2
        complexed with hdd, hem
      2. 1451258Domain d4envb1: 4env B:28-597 [220739]
        Other proteins in same PDB: d4enva2, d4envb2, d4envc2, d4envd2
        automated match to d1cf9a2
        complexed with hdd, hem
      3. 1451259Domain d4envc1: 4env C:28-597 [220741]
        Other proteins in same PDB: d4enva2, d4envb2, d4envc2, d4envd2
        automated match to d1cf9a2
        complexed with hdd, hem
      4. 1451260Domain d4envd1: 4env D:28-597 [220743]
        Other proteins in same PDB: d4enva2, d4envb2, d4envc2, d4envd2
        automated match to d1cf9a2
        complexed with hdd, hem
    12. Domains for 4enw:
      1. 1451266Domain d4enwa1: 4enw A:28-597 [220745]
        Other proteins in same PDB: d4enwa2, d4enwb2, d4enwc2, d4enwd2
        automated match to d1cf9a2
        complexed with hdd
      2. 1451267Domain d4enwb1: 4enw B:28-597 [220747]
        Other proteins in same PDB: d4enwa2, d4enwb2, d4enwc2, d4enwd2
        automated match to d1cf9a2
        complexed with hdd
      3. 1451268Domain d4enwc1: 4enw C:28-597 [220749]
        Other proteins in same PDB: d4enwa2, d4enwb2, d4enwc2, d4enwd2
        automated match to d1cf9a2
        complexed with hdd
      4. 1451269Domain d4enwd1: 4enw D:28-597 [220751]
        Other proteins in same PDB: d4enwa2, d4enwb2, d4enwc2, d4enwd2
        automated match to d1cf9a2
        complexed with hdd
  4. 1451274Pichia angusta [TaxId:4905] [190000] (1 PDB entry)
  5. 1451291Pseudomonas aeruginosa [TaxId:208964] [196661] (1 PDB entry)
  6. 1451296Vibrio salmonicida [TaxId:316275] [187875] (1 PDB entry)

More info for Protein automated matches from e.5.1.1: Heme-dependent catalases

Timeline for Protein automated matches from e.5.1.1: Heme-dependent catalases: