Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 910725Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 910726Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 912107Family a.25.1.0: automated matches [191307] (1 protein)
    not a true family
  6. 912108Protein automated matches [190036] (12 species)
    not a true protein

Species:

  1. 912109Archaeoglobus fulgidus [TaxId:2234] [186755] (1 PDB entry)
  2. 912121Archaeoglobus fulgidus [TaxId:224325] [186763] (1 PDB entry)
  3. 912134Bacillus subtilis [TaxId:1423] [187547] (1 PDB entry)
  4. 912136Campylobacter jejuni [TaxId:192222] [189193] (1 PDB entry)
  5. 912141Mycobacterium smegmatis [TaxId:246196] [188322] (2 PDB entries)
    1. Domains for 2z90:
      1. 912142Domain d2z90a_: 2z90 A: [171110]
        automated match to d1o9ra_
        complexed with cl, fe2, mg
      2. 912143Domain d2z90b_: 2z90 B: [171111]
        automated match to d1o9ra_
        complexed with cl, fe2, mg
      3. 912144Domain d2z90c_: 2z90 C: [171112]
        automated match to d1o9ra_
        complexed with cl, fe2, mg
      4. 912145Domain d2z90d_: 2z90 D: [171113]
        automated match to d1o9ra_
        complexed with cl, fe2, mg
    2. Domains for 3bkn:
      1. 912146Domain d3bkna_: 3bkn A: [172681]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      2. 912147Domain d3bknb_: 3bkn B: [172682]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      3. 912148Domain d3bknc_: 3bkn C: [172683]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      4. 912149Domain d3bknd_: 3bkn D: [172684]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      5. 912150Domain d3bkne_: 3bkn E: [172685]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      6. 912151Domain d3bknf_: 3bkn F: [172686]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      7. 912152Domain d3bkng_: 3bkn G: [172687]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      8. 912153Domain d3bknh_: 3bkn H: [172688]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      9. 912154Domain d3bkni_: 3bkn I: [172689]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      10. 912155Domain d3bknj_: 3bkn J: [172690]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      11. 912156Domain d3bknk_: 3bkn K: [172691]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
      12. 912157Domain d3bknl_: 3bkn L: [172692]
        automated match to d1jgca_
        complexed with epe, hem, mg, zn
  6. 912158Pseudomonas aeruginosa [TaxId:287] [189971] (7 PDB entries)
    1. Domain for 3r2h:
    2. Domain for 3r2k:
    3. Domain for 3r2l:
    4. Domain for 3r2m:
    5. Domain for 3r2o:
    6. Domain for 3r2r:
    7. Domain for 3r2s:
  7. 912166Pyrococcus furiosus [TaxId:2261] [187908] (3 PDB entries)
    1. Domains for 2jd6:
      1. 912167Domain d2jd60_: 2jd6 0: [166011]
        automated match to d1vlga_
        complexed with fe, so4
      2. 912168Domain d2jd61_: 2jd6 1: [166012]
        automated match to d1vlga_
        complexed with fe, so4
      3. 912169Domain d2jd62_: 2jd6 2: [166013]
        automated match to d1vlga_
        complexed with fe, so4
      4. 912170Domain d2jd63_: 2jd6 3: [166014]
        automated match to d1vlga_
        complexed with fe, so4
      5. 912171Domain d2jd64_: 2jd6 4: [166015]
        automated match to d1vlga_
        complexed with fe, so4
      6. 912172Domain d2jd65_: 2jd6 5: [166016]
        automated match to d1vlga_
        complexed with fe, so4
      7. 912173Domain d2jd66_: 2jd6 6: [166017]
        automated match to d1vlga_
        complexed with fe, so4
      8. 912174Domain d2jd67_: 2jd6 7: [166018]
        automated match to d1vlga_
        complexed with fe, so4
      9. 912175Domain d2jd68_: 2jd6 8: [166019]
        automated match to d1vlga_
        complexed with fe, so4
      10. 912176Domain d2jd69_: 2jd6 9: [166020]
        automated match to d1vlga_
        complexed with fe, so4
      11. 912177Domain d2jd6a_: 2jd6 A: [166021]
        automated match to d1vlga_
        complexed with fe, so4
      12. 912178Domain d2jd6b_: 2jd6 B: [166022]
        automated match to d1vlga_
        complexed with fe, so4
      13. 912179Domain d2jd6c_: 2jd6 C: [166023]
        automated match to d1vlga_
        complexed with fe, so4
      14. 912180Domain d2jd6d_: 2jd6 D: [166024]
        automated match to d1vlga_
        complexed with fe, so4
      15. 912181Domain d2jd6e_: 2jd6 E: [166025]
        automated match to d1vlga_
        complexed with fe, so4
      16. 912182Domain d2jd6f_: 2jd6 F: [166026]
        automated match to d1vlga_
        complexed with fe, so4
      17. 912183Domain d2jd6g_: 2jd6 G: [166027]
        automated match to d1vlga_
        complexed with fe, so4
      18. 912184Domain d2jd6h_: 2jd6 H: [166028]
        automated match to d1vlga_
        complexed with fe, so4
      19. 912185Domain d2jd6i_: 2jd6 I: [166029]
        automated match to d1vlga_
        complexed with fe, so4
      20. 912186Domain d2jd6j_: 2jd6 J: [166030]
        automated match to d1vlga_
        complexed with fe, so4
      21. 912187Domain d2jd6k_: 2jd6 K: [166031]
        automated match to d1vlga_
        complexed with fe, so4
      22. 912188Domain d2jd6l_: 2jd6 L: [166032]
        automated match to d1vlga_
        complexed with fe, so4
      23. 912189Domain d2jd6m_: 2jd6 M: [166033]
        automated match to d1vlga_
        complexed with fe, so4
      24. 912190Domain d2jd6n_: 2jd6 N: [166034]
        automated match to d1vlga_
        complexed with fe, so4
      25. 912191Domain d2jd6o_: 2jd6 O: [166035]
        automated match to d1vlga_
        complexed with fe, so4
      26. 912192Domain d2jd6p_: 2jd6 P: [166036]
        automated match to d1vlga_
        complexed with fe, so4
      27. 912193Domain d2jd6q_: 2jd6 Q: [166037]
        automated match to d1vlga_
        complexed with fe, so4
      28. 912194Domain d2jd6r_: 2jd6 R: [166038]
        automated match to d1vlga_
        complexed with fe, so4
      29. 912195Domain d2jd6s_: 2jd6 S: [166039]
        automated match to d1vlga_
        complexed with fe, so4
      30. 912196Domain d2jd6t_: 2jd6 T: [166040]
        automated match to d1vlga_
        complexed with fe, so4
      31. 912197Domain d2jd6u_: 2jd6 U: [166041]
        automated match to d1vlga_
        complexed with fe, so4
      32. 912198Domain d2jd6v_: 2jd6 V: [166042]
        automated match to d1vlga_
        complexed with fe, so4
      33. 912199Domain d2jd6w_: 2jd6 W: [166043]
        automated match to d1vlga_
        complexed with fe, so4
      34. 912200Domain d2jd6x_: 2jd6 X: [166044]
        automated match to d1vlga_
        complexed with fe, so4
      35. 912201Domain d2jd6y_: 2jd6 Y: [166045]
        automated match to d1vlga_
        complexed with fe, so4
      36. 912202Domain d2jd6z_: 2jd6 Z: [166046]
        automated match to d1vlga_
        complexed with fe, so4
    2. Domains for 2jd7:
      1. 912203Domain d2jd70_: 2jd7 0: [166047]
        automated match to d1vlga_
        complexed with fe, so4
      2. 912204Domain d2jd71_: 2jd7 1: [166048]
        automated match to d1vlga_
        complexed with fe, so4
      3. 912205Domain d2jd72_: 2jd7 2: [166049]
        automated match to d1vlga_
        complexed with fe, so4
      4. 912206Domain d2jd73_: 2jd7 3: [166050]
        automated match to d1vlga_
        complexed with fe, so4
      5. 912207Domain d2jd74_: 2jd7 4: [166051]
        automated match to d1vlga_
        complexed with fe, so4
      6. 912208Domain d2jd75_: 2jd7 5: [166052]
        automated match to d1vlga_
        complexed with fe, so4
      7. 912209Domain d2jd76_: 2jd7 6: [166053]
        automated match to d1vlga_
        complexed with fe, so4
      8. 912210Domain d2jd77_: 2jd7 7: [166054]
        automated match to d1vlga_
        complexed with fe, so4
      9. 912211Domain d2jd78_: 2jd7 8: [166055]
        automated match to d1vlga_
        complexed with fe, so4
      10. 912212Domain d2jd79_: 2jd7 9: [166056]
        automated match to d1vlga_
        complexed with fe, so4
      11. 912213Domain d2jd7a_: 2jd7 A: [166057]
        automated match to d1vlga_
        complexed with fe, so4
      12. 912214Domain d2jd7b_: 2jd7 B: [166058]
        automated match to d1vlga_
        complexed with fe, so4
      13. 912215Domain d2jd7c_: 2jd7 C: [166059]
        automated match to d1vlga_
        complexed with fe, so4
      14. 912216Domain d2jd7d_: 2jd7 D: [166060]
        automated match to d1vlga_
        complexed with fe, so4
      15. 912217Domain d2jd7e_: 2jd7 E: [166061]
        automated match to d1vlga_
        complexed with fe, so4
      16. 912218Domain d2jd7f_: 2jd7 F: [166062]
        automated match to d1vlga_
        complexed with fe, so4
      17. 912219Domain d2jd7g_: 2jd7 G: [166063]
        automated match to d1vlga_
        complexed with fe, so4
      18. 912220Domain d2jd7h_: 2jd7 H: [166064]
        automated match to d1vlga_
        complexed with fe, so4
      19. 912221Domain d2jd7i_: 2jd7 I: [166065]
        automated match to d1vlga_
        complexed with fe, so4
      20. 912222Domain d2jd7j_: 2jd7 J: [166066]
        automated match to d1vlga_
        complexed with fe, so4
      21. 912223Domain d2jd7k_: 2jd7 K: [166067]
        automated match to d1vlga_
        complexed with fe, so4
      22. 912224Domain d2jd7l_: 2jd7 L: [166068]
        automated match to d1vlga_
        complexed with fe, so4
      23. 912225Domain d2jd7m_: 2jd7 M: [166069]
        automated match to d1vlga_
        complexed with fe, so4
      24. 912226Domain d2jd7n_: 2jd7 N: [166070]
        automated match to d1vlga_
        complexed with fe, so4
      25. 912227Domain d2jd7o_: 2jd7 O: [166071]
        automated match to d1vlga_
        complexed with fe, so4
      26. 912228Domain d2jd7p_: 2jd7 P: [166072]
        automated match to d1vlga_
        complexed with fe, so4
      27. 912229Domain d2jd7q_: 2jd7 Q: [166073]
        automated match to d1vlga_
        complexed with fe, so4
      28. 912230Domain d2jd7r_: 2jd7 R: [166074]
        automated match to d1vlga_
        complexed with fe, so4
      29. 912231Domain d2jd7s_: 2jd7 S: [166075]
        automated match to d1vlga_
        complexed with fe, so4
      30. 912232Domain d2jd7t_: 2jd7 T: [166076]
        automated match to d1vlga_
        complexed with fe, so4
      31. 912233Domain d2jd7u_: 2jd7 U: [166077]
        automated match to d1vlga_
        complexed with fe, so4
      32. 912234Domain d2jd7v_: 2jd7 V: [166078]
        automated match to d1vlga_
        complexed with fe, so4
      33. 912235Domain d2jd7w_: 2jd7 W: [166079]
        automated match to d1vlga_
        complexed with fe, so4
      34. 912236Domain d2jd7x_: 2jd7 X: [166080]
        automated match to d1vlga_
        complexed with fe, so4
      35. 912237Domain d2jd7y_: 2jd7 Y: [166081]
        automated match to d1vlga_
        complexed with fe, so4
      36. 912238Domain d2jd7z_: 2jd7 Z: [166082]
        automated match to d1vlga_
        complexed with fe, so4
    3. Domains for 2jd8:
      1. 912239Domain d2jd80_: 2jd8 0: [166083]
        automated match to d1vlga_
        complexed with fe, so4, zn
      2. 912240Domain d2jd81_: 2jd8 1: [166084]
        automated match to d1vlga_
        complexed with fe, so4, zn
      3. 912241Domain d2jd82_: 2jd8 2: [166085]
        automated match to d1vlga_
        complexed with fe, so4, zn
      4. 912242Domain d2jd83_: 2jd8 3: [166086]
        automated match to d1vlga_
        complexed with fe, so4, zn
      5. 912243Domain d2jd84_: 2jd8 4: [166087]
        automated match to d1vlga_
        complexed with fe, so4, zn
      6. 912244Domain d2jd85_: 2jd8 5: [166088]
        automated match to d1vlga_
        complexed with fe, so4, zn
      7. 912245Domain d2jd86_: 2jd8 6: [166089]
        automated match to d1vlga_
        complexed with fe, so4, zn
      8. 912246Domain d2jd87_: 2jd8 7: [166090]
        automated match to d1vlga_
        complexed with fe, so4, zn
      9. 912247Domain d2jd88_: 2jd8 8: [166091]
        automated match to d1vlga_
        complexed with fe, so4, zn
      10. 912248Domain d2jd89_: 2jd8 9: [166092]
        automated match to d1vlga_
        complexed with fe, so4, zn
      11. 912249Domain d2jd8a_: 2jd8 A: [166093]
        automated match to d1vlga_
        complexed with fe, so4, zn
      12. 912250Domain d2jd8b_: 2jd8 B: [166094]
        automated match to d1vlga_
        complexed with fe, so4, zn
      13. 912251Domain d2jd8c_: 2jd8 C: [166095]
        automated match to d1vlga_
        complexed with fe, so4, zn
      14. 912252Domain d2jd8d_: 2jd8 D: [166096]
        automated match to d1vlga_
        complexed with fe, so4, zn
      15. 912253Domain d2jd8e_: 2jd8 E: [166097]
        automated match to d1vlga_
        complexed with fe, so4, zn
      16. 912254Domain d2jd8f_: 2jd8 F: [166098]
        automated match to d1vlga_
        complexed with fe, so4, zn
      17. 912255Domain d2jd8g_: 2jd8 G: [166099]
        automated match to d1vlga_
        complexed with fe, so4, zn
      18. 912256Domain d2jd8h_: 2jd8 H: [166100]
        automated match to d1vlga_
        complexed with fe, so4, zn
      19. 912257Domain d2jd8i_: 2jd8 I: [166101]
        automated match to d1vlga_
        complexed with fe, so4, zn
      20. 912258Domain d2jd8j_: 2jd8 J: [166102]
        automated match to d1vlga_
        complexed with fe, so4, zn
      21. 912259Domain d2jd8k_: 2jd8 K: [166103]
        automated match to d1vlga_
        complexed with fe, so4, zn
      22. 912260Domain d2jd8l_: 2jd8 L: [166104]
        automated match to d1vlga_
        complexed with fe, so4, zn
      23. 912261Domain d2jd8m_: 2jd8 M: [166105]
        automated match to d1vlga_
        complexed with fe, so4, zn
      24. 912262Domain d2jd8n_: 2jd8 N: [166106]
        automated match to d1vlga_
        complexed with fe, so4, zn
      25. 912263Domain d2jd8o_: 2jd8 O: [166107]
        automated match to d1vlga_
        complexed with fe, so4, zn
      26. 912264Domain d2jd8p_: 2jd8 P: [166108]
        automated match to d1vlga_
        complexed with fe, so4, zn
      27. 912265Domain d2jd8q_: 2jd8 Q: [166109]
        automated match to d1vlga_
        complexed with fe, so4, zn
      28. 912266Domain d2jd8r_: 2jd8 R: [166110]
        automated match to d1vlga_
        complexed with fe, so4, zn
      29. 912267Domain d2jd8s_: 2jd8 S: [166111]
        automated match to d1vlga_
        complexed with fe, so4, zn
      30. 912268Domain d2jd8t_: 2jd8 T: [166112]
        automated match to d1vlga_
        complexed with fe, so4, zn
      31. 912269Domain d2jd8u_: 2jd8 U: [166113]
        automated match to d1vlga_
        complexed with fe, so4, zn
      32. 912270Domain d2jd8v_: 2jd8 V: [166114]
        automated match to d1vlga_
        complexed with fe, so4, zn
      33. 912271Domain d2jd8w_: 2jd8 W: [166115]
        automated match to d1vlga_
        complexed with fe, so4, zn
      34. 912272Domain d2jd8x_: 2jd8 X: [166116]
        automated match to d1vlga_
        complexed with fe, so4, zn
      35. 912273Domain d2jd8y_: 2jd8 Y: [166117]
        automated match to d1vlga_
        complexed with fe, so4, zn
      36. 912274Domain d2jd8z_: 2jd8 Z: [166118]
        automated match to d1vlga_
        complexed with fe, so4, zn
  8. 912275Staphylococcus aureus [TaxId:93062] [187608] (1 PDB entry)
  9. 912280Synechococcus elongatus [TaxId:32046] [189121] (1 PDB entry)
  10. 912285Thermosynechococcus elongatus [TaxId:197221] [187511] (1 PDB entry)
  11. 912298Treponema pallidum [TaxId:160] [187094] (1 PDB entry)
  12. 912314Trichoplusia ni [TaxId:7111] [186900] (1 PDB entry)

More info for Protein automated matches from a.25.1.0: automated matches

Timeline for Protein automated matches from a.25.1.0: automated matches: