Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1090417Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1090418Superfamily a.60.1: SAM/Pointed domain [47769] (4 families) (S)
  5. 1090541Family a.60.1.0: automated matches [191306] (1 protein)
    not a true family
  6. 1090542Protein automated matches [190031] (2 species)
    not a true protein

Species:

  1. 1090543Fruit fly (Drosophila melanogaster) [TaxId:7227] [186750] (2 PDB entries)
    1. Domain for 1pk1:
    2. Domains for 1pk3:
      1. 1090544Domain d1pk3b_: 1pk3 B: [118716]
        Other proteins in same PDB: d1pk3a1
        automated match to d1kw4a_
        complexed with bme
      2. 1090545Domain d1pk3c_: 1pk3 C: [118717]
        Other proteins in same PDB: d1pk3a1
        automated match to d1kw4a_
        complexed with bme
  2. 1090547Human (Homo sapiens) [TaxId:9606] [188353] (3 PDB entries)
    1. Domains for 3bq7:
      1. 1090554Domain d3bq7a_: 3bq7 A: [172782]
        automated match to d2f3na1
      2. 1090555Domain d3bq7b_: 3bq7 B: [172783]
        automated match to d2f3na1
      3. 1090556Domain d3bq7c_: 3bq7 C: [172784]
        automated match to d2f3na1
      4. 1090557Domain d3bq7d_: 3bq7 D: [172785]
        automated match to d2f3na1
      5. 1090558Domain d3bq7e_: 3bq7 E: [172786]
        automated match to d2f3na1
      6. 1090559Domain d3bq7f_: 3bq7 F: [172787]
        automated match to d2f3na1
    2. Domain for 3bs5:
    3. Domains for 3kka:
      1. 1090549Domain d3kkaa_: 3kka A: [196506]
        automated match to d3kkad_
        complexed with cl
      2. 1090550Domain d3kkab_: 3kka B: [196505]
        automated match to d3kkad_
        complexed with cl
      3. 1090551Domain d3kkac_: 3kka C: [179398]
        automated match to d1f0ma_
        complexed with cl
      4. 1090552Domain d3kkad_: 3kka D: [179399]
        automated match to d1f0ma_
        complexed with cl
      5. 1090553Domain d3kkae_: 3kka E: [179400]
        automated match to d1f0ma_
        complexed with cl

More info for Protein automated matches from a.60.1.0: automated matches

Timeline for Protein automated matches from a.60.1.0: automated matches: