Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 916790Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 916791Superfamily a.60.1: SAM/Pointed domain [47769] (4 families) (S)
  5. 916913Family a.60.1.0: automated matches [191306] (1 protein)
    not a true family
  6. 916914Protein automated matches [190031] (2 species)
    not a true protein

Species:

  1. 916915Fruit fly (Drosophila melanogaster) [TaxId:7227] [186750] (2 PDB entries)
    1. Domain for 1pk1:
    2. Domains for 1pk3:
      1. 916916Domain d1pk3b_: 1pk3 B: [118716]
        Other proteins in same PDB: d1pk3a1
        automated match to d1kw4a_
        complexed with bme
      2. 916917Domain d1pk3c_: 1pk3 C: [118717]
        Other proteins in same PDB: d1pk3a1
        automated match to d1kw4a_
        complexed with bme
  2. 916919Human (Homo sapiens) [TaxId:9606] [188353] (3 PDB entries)
    1. Domains for 3bq7:
      1. 916924Domain d3bq7a_: 3bq7 A: [172782]
        automated match to d2f3na1
      2. 916925Domain d3bq7b_: 3bq7 B: [172783]
        automated match to d2f3na1
      3. 916926Domain d3bq7c_: 3bq7 C: [172784]
        automated match to d2f3na1
      4. 916927Domain d3bq7d_: 3bq7 D: [172785]
        automated match to d2f3na1
      5. 916928Domain d3bq7e_: 3bq7 E: [172786]
        automated match to d2f3na1
      6. 916929Domain d3bq7f_: 3bq7 F: [172787]
        automated match to d2f3na1
    2. Domain for 3bs5:
    3. Domains for 3kka:
      1. 916921Domain d3kkac_: 3kka C: [179398]
        automated match to d1f0ma_
        complexed with cl
      2. 916922Domain d3kkad_: 3kka D: [179399]
        automated match to d1f0ma_
        complexed with cl
      3. 916923Domain d3kkae_: 3kka E: [179400]
        automated match to d1f0ma_
        complexed with cl

More info for Protein automated matches from a.60.1.0: automated matches

Timeline for Protein automated matches from a.60.1.0: automated matches: