Lineage for Species: Plesiomonas shigelloides [TaxId: 703]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2841375Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
    has additional subdomain(s) that are not in the common domain
  6. 2842913Protein automated matches [190085] (59 species)
    not a true protein
  7. 2843321Species Plesiomonas shigelloides [TaxId:703] [189972] (9 PDB entries)

PDB entries in Species: Plesiomonas shigelloides [TaxId: 703]:

  1. Domain(s) for 3lu1:
    1. 2843348Domain d3lu1a_: 3lu1 A: [213047]
      automated match to d3ruca_
      complexed with gly, na, nad, so4, ud2
    2. 2843349Domain d3lu1b_: 3lu1 B: [213048]
      automated match to d3ruca_
      complexed with gly, na, nad, so4, ud2
    3. 2843350Domain d3lu1c_: 3lu1 C: [213049]
      automated match to d3ruca_
      complexed with gly, na, nad, so4, ud2
    4. 2843351Domain d3lu1d_: 3lu1 D: [213050]
      automated match to d3ruca_
      complexed with gly, na, nad, so4, ud2
  2. Domain(s) for 3ru7:
    1. 2843352Domain d3ru7a1: 3ru7 A:1-340 [185158]
      Other proteins in same PDB: d3ru7a2, d3ru7b2, d3ru7c2, d3ru7d2
      automated match to d1sb8a_
      complexed with gly, na, nad, so4, unl
    2. 2843353Domain d3ru7b1: 3ru7 B:1-340 [185159]
      Other proteins in same PDB: d3ru7a2, d3ru7b2, d3ru7c2, d3ru7d2
      automated match to d1sb8a_
      complexed with gly, na, nad, so4, unl
    3. 2843354Domain d3ru7c1: 3ru7 C:1-340 [185160]
      Other proteins in same PDB: d3ru7a2, d3ru7b2, d3ru7c2, d3ru7d2
      automated match to d1sb8a_
      complexed with gly, na, nad, so4, unl
    4. 2843355Domain d3ru7d1: 3ru7 D:1-340 [185161]
      Other proteins in same PDB: d3ru7a2, d3ru7b2, d3ru7c2, d3ru7d2
      automated match to d1sb8a_
      complexed with gly, na, nad, so4, unl
  3. Domain(s) for 3ru9:
    1. 2843333Domain d3ru9a_: 3ru9 A: [185163]
      automated match to d1sb8a_
      complexed with gly, nad, so4, unl
    2. 2843334Domain d3ru9b_: 3ru9 B: [185164]
      automated match to d1sb8a_
      complexed with gly, nad, so4, unl
    3. 2843335Domain d3ru9c_: 3ru9 C: [185165]
      automated match to d1sb8a_
      complexed with gly, nad, so4, unl
    4. 2843336Domain d3ru9d_: 3ru9 D: [185166]
      automated match to d1sb8a_
      complexed with gly, nad, so4, unl
  4. Domain(s) for 3rua:
    1. 2843322Domain d3ruaa_: 3rua A: [185167]
      automated match to d1sb8a_
      complexed with nad, so4, unl
    2. 2843323Domain d3ruab_: 3rua B: [185168]
      automated match to d1sb8a_
      complexed with nad, so4, unl
    3. 2843324Domain d3ruac_: 3rua C: [185169]
      automated match to d1sb8a_
      complexed with nad, so4, unl
    4. 2843325Domain d3ruad_: 3rua D: [185170]
      automated match to d1sb8a_
      complexed with nad, so4, unl
  5. Domain(s) for 3ruc:
    1. 2843329Domain d3ruca_: 3ruc A: [185171]
      automated match to d1sb8a_
      complexed with nad, so4, ud2
    2. 2843330Domain d3rucb_: 3ruc B: [185172]
      automated match to d1sb8a_
      complexed with nad, so4, ud2
    3. 2843331Domain d3rucc_: 3ruc C: [185173]
      automated match to d1sb8a_
      complexed with nad, so4, ud2
    4. 2843332Domain d3rucd_: 3ruc D: [185174]
      automated match to d1sb8a_
      complexed with nad, so4, ud2
  6. Domain(s) for 3rud:
    1. 2843344Domain d3ruda_: 3rud A: [185175]
      automated match to d1sb8a_
      complexed with nad, unl
    2. 2843345Domain d3rudb_: 3rud B: [185176]
      automated match to d1sb8a_
      complexed with nad, unl
    3. 2843346Domain d3rudc_: 3rud C: [185177]
      automated match to d1sb8a_
      complexed with nad, unl
    4. 2843347Domain d3rudd_: 3rud D: [185178]
      automated match to d1sb8a_
      complexed with nad, unl
  7. Domain(s) for 3rue:
    1. 2843341Domain d3ruea_: 3rue A: [185179]
      automated match to d1sb8a_
      complexed with nad, unl
    2. 2843342Domain d3rueb_: 3rue B: [185180]
      automated match to d1sb8a_
      complexed with nad, unl
    3. 2843343Domain d3rues_: 3rue S: [185181]
      automated match to d1sb8a_
      complexed with nad, unl
  8. Domain(s) for 3ruf:
    1. 2843326Domain d3rufa_: 3ruf A: [185182]
      automated match to d1sb8a_
      complexed with nad, so4, udp
    2. 2843327Domain d3rufb_: 3ruf B: [185183]
      automated match to d1sb8a_
      complexed with nad, so4, udp
    3. 2843328Domain d3rufs_: 3ruf S: [185184]
      automated match to d1sb8a_
      complexed with nad, so4, udp
  9. Domain(s) for 3ruh:
    1. 2843337Domain d3ruha_: 3ruh A: [185185]
      automated match to d1sb8a_
      complexed with na, nad, so4, ud6
    2. 2843338Domain d3ruhb_: 3ruh B: [185186]
      automated match to d1sb8a_
      complexed with na, nad, so4, ud6
    3. 2843339Domain d3ruhc_: 3ruh C: [185187]
      automated match to d1sb8a_
      complexed with na, nad, so4, ud6
    4. 2843340Domain d3ruhd_: 3ruh D: [185188]
      automated match to d1sb8a_
      complexed with na, nad, so4, ud6

More info for Species Plesiomonas shigelloides [TaxId:703] from c.2.1.2 automated matches

Timeline for Species Plesiomonas shigelloides [TaxId:703] from c.2.1.2 automated matches: