Lineage for Species: Human immunodeficiency virus 1 (z2/cdc-z34 isolate) [TaxId: 11683]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2058814Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2058815Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2058816Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 protein domains)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 2060049Protein automated matches [190433] (11 species)
    not a true protein
  7. 2060072Species Human immunodeficiency virus 1 (z2/cdc-z34 isolate) [TaxId:11683] [189840] (10 PDB entries)

PDB entries in Species: Human immunodeficiency virus 1 (z2/cdc-z34 isolate) [TaxId: 11683]:

  1. Domain(s) for 2xye:
    1. 2060091Domain d2xyea_: 2xye A: [170478]
      automated match to d1k6ca_
      complexed with cxg
    2. 2060092Domain d2xyeb_: 2xye B: [170479]
      automated match to d1k6ca_
      complexed with cxg
  2. Domain(s) for 2xyf:
    1. 2060083Domain d2xyfa_: 2xyf A: [170480]
      automated match to d1k6ca_
      complexed with g40
    2. 2060084Domain d2xyfb_: 2xyf B: [170481]
      automated match to d1k6ca_
      complexed with g40
  3. Domain(s) for 5agz:
    1. 2060073Domain d5agza_: 5agz A: [272187]
      automated match to d2xyfa_
      complexed with cl, qha
    2. 2060074Domain d5agzb_: 5agz B: [272189]
      automated match to d2xyfa_
      complexed with cl, qha
  4. Domain(s) for 5ah6:
    1. 2060085Domain d5ah6a_: 5ah6 A: [272186]
      automated match to d2xyfa_
      complexed with c7u, cl
    2. 2060086Domain d5ah6b_: 5ah6 B: [272185]
      automated match to d2xyfa_
      complexed with c7u, cl
  5. Domain(s) for 5ah7:
    1. 2060089Domain d5ah7a_: 5ah7 A: [272177]
      automated match to d2xyfa_
      complexed with c7j, cl
    2. 2060090Domain d5ah7b_: 5ah7 B: [272178]
      automated match to d2xyfa_
      complexed with c7j, cl
  6. Domain(s) for 5ah8:
    1. 2060075Domain d5ah8a_: 5ah8 A: [272194]
      automated match to d2xyfa_
      complexed with c7w, cl
    2. 2060076Domain d5ah8b_: 5ah8 B: [272193]
      automated match to d2xyfa_
      complexed with c7w, cl
  7. Domain(s) for 5ah9:
    1. 2060079Domain d5ah9a_: 5ah9 A: [272182]
      automated match to d2xyfa_
      complexed with c7l, cl
    2. 2060080Domain d5ah9b_: 5ah9 B: [272190]
      automated match to d2xyfa_
      complexed with c7l, cl
  8. Domain(s) for 5aha:
    1. 2060077Domain d5ahaa_: 5aha A: [272181]
      automated match to d2xyfa_
      complexed with cl, zlp
    2. 2060078Domain d5ahab_: 5aha B: [272184]
      automated match to d2xyfa_
      complexed with cl, zlp
  9. Domain(s) for 5ahb:
    1. 2060087Domain d5ahba_: 5ahb A: [272188]
      automated match to d2xyfa_
      complexed with cl, j5l
    2. 2060088Domain d5ahbb_: 5ahb B: [272179]
      automated match to d2xyfa_
      complexed with cl, j5l
  10. Domain(s) for 5ahc:
    1. 2060081Domain d5ahca_: 5ahc A: [272183]
      automated match to d2xyfa_
      complexed with cl, vxl
    2. 2060082Domain d5ahcb_: 5ahc B: [272180]
      automated match to d2xyfa_
      complexed with cl, vxl

More info for Species Human immunodeficiency virus 1 (z2/cdc-z34 isolate) [TaxId:11683] from b.50.1.1 automated matches

Timeline for Species Human immunodeficiency virus 1 (z2/cdc-z34 isolate) [TaxId:11683] from b.50.1.1 automated matches: