Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)
    has additional insertions and/or extensions that are not grouped together
  6. Protein Glutamate receptor ligand binding core [53881] (5 species)
  7. Species Human (Homo sapiens) [TaxId:9606] [189807] (8 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 3rn8:
    1. Domain d3rn8a_: 3rn8 A: [185040]
      automated match to d1lb8a_
      complexed with act, glu, rn8, so4, zn
    2. Domain d3rn8b_: 3rn8 B: [185041]
      automated match to d1lb8a_
      complexed with act, glu, rn8, so4, zn
    3. Domain d3rn8c_: 3rn8 C: [185042]
      automated match to d1lb8a_
      complexed with act, glu, rn8, so4, zn
  2. Domain(s) for 3rnn:
    1. Domain d3rnna_: 3rnn A: [185066]
      automated match to d1mm6a_
      complexed with glu, rnn, zn
    2. Domain d3rnnb_: 3rnn B: [185067]
      automated match to d1mm6a_
      complexed with glu, rnn, zn
    3. Domain d3rnnc_: 3rnn C: [185068]
      automated match to d1mm6a_
      complexed with glu, rnn, zn
  3. Domain(s) for 3ua8:
  4. Domain(s) for 5h8s:
    1. Domain d5h8sa_: 5h8s A: [314725]
      Other proteins in same PDB: d5h8sc2
      automated match to d2xhda_
      complexed with 5yc, cac, glu, zn
    2. Domain d5h8sb_: 5h8s B: [314744]
      Other proteins in same PDB: d5h8sc2
      automated match to d2xhda_
      complexed with 5yc, cac, glu, zn
    3. Domain d5h8sc1: 5h8s C:3-262 [314732]
      Other proteins in same PDB: d5h8sc2
      automated match to d2xhda_
      complexed with 5yc, cac, glu, zn
  5. Domain(s) for 5ybf:
    1. Domain d5ybfa_: 5ybf A: [348780]
      automated match to d2xhda_
      complexed with 8sr, act, glu, zn
    2. Domain d5ybfb_: 5ybf B: [348790]
      automated match to d2xhda_
      complexed with 8sr, act, glu, zn
    3. Domain d5ybfc_: 5ybf C: [348809]
      automated match to d2xhda_
      complexed with 8sr, act, glu, zn
    4. Domain d5ybfd_: 5ybf D: [348787]
      automated match to d2xhda_
      complexed with 8sr, act, glu, zn
    5. Domain d5ybfe_: 5ybf E: [348791]
      automated match to d2xhda_
      complexed with 8sr, act, glu, zn
    6. Domain d5ybff_: 5ybf F: [348815]
      automated match to d2xhda_
      complexed with 8sr, act, glu, zn
  6. Domain(s) for 5ybg:
    1. Domain d5ybga_: 5ybg A: [348983]
      automated match to d2xhda_
      complexed with 8so, act, glu, gol, zn
    2. Domain d5ybgb_: 5ybg B: [348853]
      automated match to d2xhda_
      complexed with 8so, act, glu, gol, zn
    3. Domain d5ybgc_: 5ybg C: [348835]
      automated match to d2xhda_
      complexed with 8so, act, glu, gol, zn
    4. Domain d5ybgd_: 5ybg D: [348772]
      automated match to d2xhda_
      complexed with 8so, act, glu, gol, zn
    5. Domain d5ybge_: 5ybg E: [348778]
      automated match to d2xhda_
      complexed with 8so, act, glu, gol, zn
    6. Domain d5ybgf_: 5ybg F: [348872]
      automated match to d2xhda_
      complexed with 8so, act, glu, gol, zn
  7. Domain(s) for 5zg0:
    1. Domain d5zg0a_: 5zg0 A: [362576]
      Other proteins in same PDB: d5zg0d2
      automated match to d2xhda_
      complexed with 9c3, act, glu, zn
    2. Domain d5zg0b_: 5zg0 B: [362572]
      Other proteins in same PDB: d5zg0d2
      automated match to d2xhda_
      complexed with 9c3, act, glu, zn
    3. Domain d5zg0c_: 5zg0 C: [362542]
      Other proteins in same PDB: d5zg0d2
      automated match to d2xhda_
      complexed with 9c3, act, glu, zn
    4. Domain d5zg0d1: 5zg0 D:413-795 [362623]
      Other proteins in same PDB: d5zg0d2
      automated match to d2xhda_
      complexed with 9c3, act, glu, zn
    5. Domain d5zg0e_: 5zg0 E: [362614]
      Other proteins in same PDB: d5zg0d2
      automated match to d2xhda_
      complexed with 9c3, act, glu, zn
    6. Domain d5zg0f_: 5zg0 F: [362578]
      Other proteins in same PDB: d5zg0d2
      automated match to d2xhda_
      complexed with 9c3, act, glu, zn
  8. Domain(s) for 7f3o:
    1. Domain d7f3ob1: 7f3o B:413-795 [418140]
      Other proteins in same PDB: d7f3oa2, d7f3ob2, d7f3oc2, d7f3od2, d7f3oe2, d7f3of2
      automated match to d5ybge_
      complexed with 0yk, act, glu, gol, zn
    2. Domain d7f3of1: 7f3o F:413-795 [418148]
      Other proteins in same PDB: d7f3oa2, d7f3ob2, d7f3oc2, d7f3od2, d7f3oe2, d7f3of2
      automated match to d5ybge_
      complexed with 0yk, act, glu, gol, zn
    3. Domain d7f3oc1: 7f3o C:413-795 [418142]
      Other proteins in same PDB: d7f3oa2, d7f3ob2, d7f3oc2, d7f3od2, d7f3oe2, d7f3of2
      automated match to d5ybge_
      complexed with 0yk, act, glu, gol, zn
    4. Domain d7f3oa1: 7f3o A:413-795 [418138]
      Other proteins in same PDB: d7f3oa2, d7f3ob2, d7f3oc2, d7f3od2, d7f3oe2, d7f3of2
      automated match to d5ybge_
      complexed with 0yk, act, glu, gol, zn
    5. Domain d7f3od1: 7f3o D:413-795 [418144]
      Other proteins in same PDB: d7f3oa2, d7f3ob2, d7f3oc2, d7f3od2, d7f3oe2, d7f3of2
      automated match to d5ybge_
      complexed with 0yk, act, glu, gol, zn
    6. Domain d7f3oe1: 7f3o E:413-795 [418146]
      Other proteins in same PDB: d7f3oa2, d7f3ob2, d7f3oc2, d7f3od2, d7f3oe2, d7f3of2
      automated match to d5ybge_
      complexed with 0yk, act, glu, gol, zn

More info for Species Human (Homo sapiens) [TaxId:9606] from c.94.1.1 Glutamate receptor ligand binding core

Timeline for Species Human (Homo sapiens) [TaxId:9606] from c.94.1.1 Glutamate receptor ligand binding core: