Lineage for Species: Vicugna pacos [TaxId: 30538]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2017117Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2019634Protein automated matches [190119] (22 species)
    not a true protein
  7. 2020506Species Vicugna pacos [TaxId:30538] [189756] (34 PDB entries)

PDB entries in Species: Vicugna pacos [TaxId: 30538]:

  1. Domain(s) for 2xt1:
  2. Domain(s) for 2xv6:
    1. 2020512Domain d2xv6b1: 2xv6 B:0-112 [170417]
      Other proteins in same PDB: d2xv6a_, d2xv6b2, d2xv6c_, d2xv6d2
      automated match to d2p42b1
    2. 2020513Domain d2xv6d1: 2xv6 D:1-112 [192801]
      Other proteins in same PDB: d2xv6a_, d2xv6b2, d2xv6c_, d2xv6d2
      automated match to d1ieha_
  3. Domain(s) for 2xxc:
  4. Domain(s) for 2xxm:
  5. Domain(s) for 4jvp:
    1. 2020516Domain d4jvpa1: 4jvp A:1-127 [196921]
      Other proteins in same PDB: d4jvpa2, d4jvpb2
      automated match to d1jtpb_
      complexed with so4
    2. 2020517Domain d4jvpb1: 4jvp B:3-127 [202808]
      Other proteins in same PDB: d4jvpa2, d4jvpb2
      automated match to d4jvpa_
      complexed with so4
  6. Domain(s) for 4lgp:
    1. 2287807Domain d4lgpb_: 4lgp B: [331108]
      automated match to d4y7ma_
      complexed with cl, edo
    2. 2287921Domain d4lgpd_: 4lgp D: [331222]
      automated match to d4y7ma_
      complexed with cl, edo
  7. Domain(s) for 4lgr:
  8. Domain(s) for 4lgs:
  9. Domain(s) for 4lhj:
  10. Domain(s) for 4lhq:
    1. 2287867Domain d4lhqb_: 4lhq B: [331168]
      automated match to d4ocmc_
    2. 2288028Domain d4lhqd_: 4lhq D: [331329]
      automated match to d4ocmc_
  11. Domain(s) for 4tvs:
    1. 2020510Domain d4tvsa1: 4tvs a:1-127 [260054]
      Other proteins in same PDB: d4tvsa2, d4tvsb2
      automated match to d4heme_
      complexed with gol, so4
    2. 2020511Domain d4tvsb1: 4tvs b:1-127 [259542]
      Other proteins in same PDB: d4tvsa2, d4tvsb2
      automated match to d4heme_
      complexed with gol, so4
  12. Domain(s) for 4x7c:
    1. 2020521Domain d4x7cc_: 4x7c C: [270117]
      Other proteins in same PDB: d4x7cd2
      automated match to d4b50a_
    2. 2020522Domain d4x7cd1: 4x7c D:1-119 [270118]
      Other proteins in same PDB: d4x7cd2
      automated match to d4b50a_
  13. Domain(s) for 4x7e:
    1. 2020518Domain d4x7ec1: 4x7e C:1-119 [309966]
      Other proteins in same PDB: d4x7ec2, d4x7ed2
      automated match to d4x7dd_
      complexed with act, edo
    2. 2020519Domain d4x7ed1: 4x7e D:1-119 [309968]
      Other proteins in same PDB: d4x7ec2, d4x7ed2
      automated match to d4x7dd_
      complexed with act, edo
  14. Domain(s) for 4x7f:
    1. 2020514Domain d4x7fc1: 4x7f C:1-112 [309970]
      Other proteins in same PDB: d4x7fc2
      automated match to d4x7dd_
      complexed with edo, imd, na, po4
    2. 2020515Domain d4x7fd_: 4x7f D: [309972]
      Other proteins in same PDB: d4x7fc2
      automated match to d4x7dd_
      complexed with edo, imd, na, po4
  15. Domain(s) for 4xt1:
  16. Domain(s) for 5e0q:
  17. Domain(s) for 5e1h:
  18. Domain(s) for 5hgg:
    1. 2274679Domain d5hggt_: 5hgg T: [317980]
      Other proteins in same PDB: d5hgga_, d5hggb_
      automated match to d2vyrh_
      complexed with gol, mes, so4, twn
    2. 2274694Domain d5hggs_: 5hgg S: [317995]
      Other proteins in same PDB: d5hgga_, d5hggb_
      automated match to d2vyrh_
      complexed with gol, mes, so4, twn
  19. Domain(s) for 5hvf:
  20. Domain(s) for 5hvg:
    1. 2275485Domain d5hvgd_: 5hvg D: [318786]
      Other proteins in same PDB: d5hvgb2
      automated match to d4ldeb_
      complexed with act, bma, man, nag, zn
    2. 2275493Domain d5hvgb1: 5hvg B:1-121 [318794]
      Other proteins in same PDB: d5hvgb2
      automated match to d4ldeb_
      complexed with act, bma, man, nag, zn
  21. Domain(s) for 5hvh:
    1. 2275477Domain d5hvhc1: 5hvh C:2-118 [318778]
      Other proteins in same PDB: d5hvhb2, d5hvhc2
      automated match to d4ldeb_
      complexed with nag, zn
    2. 2275486Domain d5hvhb1: 5hvh B:3-121 [318787]
      Other proteins in same PDB: d5hvhb2, d5hvhc2
      automated match to d4ldeb_
      complexed with nag, zn
  22. Domain(s) for 5ivo:
  23. Domain(s) for 5j1s:
  24. Domain(s) for 5j1t:
  25. Domain(s) for 5l21:
  26. Domain(s) for 5lhr:
  27. Domain(s) for 5m30:
    1. 2292363Domain d5m30e1: 5m30 E:1-118 [335664]
      Other proteins in same PDB: d5m30d2, d5m30e2, d5m30f2
      automated match to d4ldeb_
    2. 2292420Domain d5m30d1: 5m30 D:1-118 [335721]
      Other proteins in same PDB: d5m30d2, d5m30e2, d5m30f2
      automated match to d4ldeb_
    3. 2292443Domain d5m30f1: 5m30 F:1-118 [335744]
      Other proteins in same PDB: d5m30d2, d5m30e2, d5m30f2
      automated match to d4ldeb_
  28. Domain(s) for 5o02:
  29. Domain(s) for 5o04:
    1. 2296511Domain d5o04d_: 5o04 D: [339812]
      Other proteins in same PDB: d5o04c2
      automated match to d4xt1c_
      complexed with edo
    2. 2296512Domain d5o04c1: 5o04 C:1-119 [339813]
      Other proteins in same PDB: d5o04c2
      automated match to d4xt1c_
      complexed with edo
    3. 2296520Domain d5o04e_: 5o04 E: [339821]
      Other proteins in same PDB: d5o04c2
      automated match to d4ldeb_
      complexed with edo
    4. 2296531Domain d5o04f_: 5o04 F: [339832]
      Other proteins in same PDB: d5o04c2
      automated match to d4ldeb_
      complexed with edo
  30. Domain(s) for 5o05:
    1. 2296507Domain d5o05d_: 5o05 D: [339808]
      automated match to d4ldeb_
      complexed with edo
    2. 2296518Domain d5o05c_: 5o05 C: [339819]
      automated match to d4ldeb_
      complexed with edo
  31. Domain(s) for 5o0w:
    1. 2296284Domain d5o0wg1: 5o0w G:2-135 [339585]
      Other proteins in same PDB: d5o0wa_, d5o0wb_, d5o0wc_, d5o0wd_, d5o0we2, d5o0wf2, d5o0wg2, d5o0wh2
      automated match to d4dkaa_
      complexed with gol
    2. 2296289Domain d5o0wf1: 5o0w F:2-135 [339590]
      Other proteins in same PDB: d5o0wa_, d5o0wb_, d5o0wc_, d5o0wd_, d5o0we2, d5o0wf2, d5o0wg2, d5o0wh2
      automated match to d4dkaa_
      complexed with gol
    3. 2296303Domain d5o0we1: 5o0w E:2-135 [339604]
      Other proteins in same PDB: d5o0wa_, d5o0wb_, d5o0wc_, d5o0wd_, d5o0we2, d5o0wf2, d5o0wg2, d5o0wh2
      automated match to d4dkaa_
      complexed with gol
    4. 2296305Domain d5o0wh1: 5o0w H:2-135 [339606]
      Other proteins in same PDB: d5o0wa_, d5o0wb_, d5o0wc_, d5o0wd_, d5o0we2, d5o0wf2, d5o0wg2, d5o0wh2
      automated match to d4dkaa_
      complexed with gol
  32. Domain(s) for 5ocl:
    1. 2293853Domain d5oclc_: 5ocl C: [337154]
      automated match to d2p49b_
    2. 2293930Domain d5oclh_: 5ocl H: [337231]
      automated match to d2p49b_
    3. 2293953Domain d5oclf_: 5ocl F: [337254]
      automated match to d2p49b_
    4. 2293990Domain d5ocla_: 5ocl A: [337291]
      automated match to d2p49b_
  33. Domain(s) for 5omn:
  34. Domain(s) for 5vxj:
    1. 2295472Domain d5vxjf_: 5vxj F: [338773]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_
    2. 2295482Domain d5vxjd_: 5vxj D: [338783]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_
    3. 2295484Domain d5vxjh_: 5vxj H: [338785]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_
    4. 2295491Domain d5vxjj_: 5vxj J: [338792]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_
    5. 2295509Domain d5vxjb_: 5vxj B: [338810]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_

More info for Species Vicugna pacos [TaxId:30538] from b.1.1.1 automated matches

Timeline for Species Vicugna pacos [TaxId:30538] from b.1.1.1 automated matches: