Lineage for Species: Porcine rotavirus [TaxId: 31578]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2778274Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2778275Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families) (S)
  5. 2780402Family b.29.1.14: vp4 sialic acid binding domain [74907] (2 proteins)
    automatically mapped to Pfam PF00426
  6. 2780411Protein automated matches [190699] (4 species)
    not a true protein
  7. 2780415Species Porcine rotavirus [TaxId:31578] [189719] (3 PDB entries)

PDB entries in Species: Porcine rotavirus [TaxId: 31578]:

  1. Domain(s) for 3sis:
    1. 2780420Domain d3sisa1: 3sis A:64-224 [185416]
      Other proteins in same PDB: d3sisa2
      automated match to d1kqra_
      complexed with mn0, mpd, na
    2. 2780421Domain d3sisb_: 3sis B: [185417]
      Other proteins in same PDB: d3sisa2
      automated match to d1kqra_
      complexed with mn0, mpd, na
  2. Domain(s) for 3sit:
    1. 2780416Domain d3sita1: 3sit A:64-224 [185418]
      Other proteins in same PDB: d3sita2
      automated match to d1kqra_
      complexed with mrd, na
    2. 2780417Domain d3sitb_: 3sit B: [185419]
      Other proteins in same PDB: d3sita2
      automated match to d1kqra_
      complexed with mrd, na
  3. Domain(s) for 3tay:
    1. 2780418Domain d3taya1: 3tay A:64-224 [192512]
      Other proteins in same PDB: d3taya2, d3tayb2
      automated match to d2i2sa_
      complexed with ben, epe, mn0, mpd, na, so4
    2. 2780419Domain d3tayb1: 3tay B:64-224 [192819]
      Other proteins in same PDB: d3taya2, d3tayb2
      automated match to d2i2sa_
      complexed with ben, epe, mn0, mpd, na, so4

More info for Species Porcine rotavirus [TaxId:31578] from b.29.1.14 automated matches

Timeline for Species Porcine rotavirus [TaxId:31578] from b.29.1.14 automated matches: