Lineage for Species: Thermoplasma acidophilum [TaxId: 273075]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2085156Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2085157Family c.1.10.1: Class I aldolase [51570] (13 protein domains)
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. 2085665Protein automated matches [190095] (24 species)
    not a true protein
  7. 2085891Species Thermoplasma acidophilum [TaxId:273075] [189712] (6 PDB entries)

PDB entries in Species: Thermoplasma acidophilum [TaxId: 273075]:

  1. Domain(s) for 3s0c:
    1. 2085907Domain d3s0ca_: 3s0c A: [185239]
      automated match to d1vpxe_
      complexed with gol
    2. 2085908Domain d3s0cb_: 3s0c B: [200575]
      automated match to d3s0ce_
      complexed with gol
    3. 2085909Domain d3s0cc_: 3s0c C: [200576]
      automated match to d3s0ce_
      complexed with gol
    4. 2085910Domain d3s0cd_: 3s0c D: [185240]
      automated match to d1vpxe_
      complexed with gol
    5. 2085911Domain d3s0ce_: 3s0c E: [185241]
      automated match to d1vpxe_
      complexed with gol
  2. Domain(s) for 3s1u:
    1. 2085912Domain d3s1ua_: 3s1u A: [200577]
      automated match to d3s0ca_
      complexed with cl, e4p
    2. 2085913Domain d3s1ub_: 3s1u B: [200578]
      automated match to d3s0ca_
      complexed with cl, e4p
    3. 2085914Domain d3s1uc_: 3s1u C: [200579]
      automated match to d3s0ce_
      complexed with cl, e4p
    4. 2085915Domain d3s1ud_: 3s1u D: [200580]
      automated match to d3s0ce_
      complexed with cl, e4p
    5. 2085916Domain d3s1ue_: 3s1u E: [193657]
      automated match to d3s0cd_
      complexed with cl, e4p
  3. Domain(s) for 3s1v:
    1. 2085897Domain d3s1va_: 3s1v A: [216171]
      automated match to d3s0ce_
      complexed with f6r, gol
    2. 2085898Domain d3s1vb_: 3s1v B: [216172]
      automated match to d3s0ce_
      complexed with f6r, gol
    3. 2085899Domain d3s1vc_: 3s1v C: [216173]
      automated match to d3s0ce_
      complexed with f6r, gol
    4. 2085900Domain d3s1vd_: 3s1v D: [216174]
      automated match to d3s0ce_
      complexed with f6r, gol
    5. 2085901Domain d3s1ve_: 3s1v E: [216175]
      automated match to d3s0ce_
      complexed with f6r, gol
  4. Domain(s) for 3s1w:
    1. 2085902Domain d3s1wa_: 3s1w A: [185247]
      automated match to d1vpxe_
      complexed with flc, gol
    2. 2085903Domain d3s1wb_: 3s1w B: [185248]
      automated match to d1vpxe_
      complexed with flc, gol
    3. 2085904Domain d3s1wc_: 3s1w C: [185249]
      automated match to d1vpxe_
      complexed with flc, gol
    4. 2085905Domain d3s1wd_: 3s1w D: [185250]
      automated match to d1vpxe_
      complexed with flc, gol
    5. 2085906Domain d3s1we_: 3s1w E: [185251]
      automated match to d1vpxe_
      complexed with flc, gol
  5. Domain(s) for 3s1x:
    1. 2085892Domain d3s1xa_: 3s1x A: [216176]
      automated match to d3s0ce_
      complexed with i22
    2. 2085893Domain d3s1xb_: 3s1x B: [216177]
      automated match to d3s0ce_
      complexed with i22
    3. 2085894Domain d3s1xc_: 3s1x C: [216178]
      automated match to d3s0ce_
      complexed with i22
    4. 2085895Domain d3s1xd_: 3s1x D: [216179]
      automated match to d3s0ce_
      complexed with i22
    5. 2085896Domain d3s1xe_: 3s1x E: [216180]
      automated match to d3s0ce_
      complexed with i22
  6. Domain(s) for 4xz9:
    1. 2085917Domain d4xz9a_: 4xz9 A: [277656]
      automated match to d3s1xa_
      complexed with act, g3p, gol, pdo
    2. 2085918Domain d4xz9b_: 4xz9 B: [277659]
      automated match to d3s1xa_
      complexed with act, g3p, gol, pdo
    3. 2085919Domain d4xz9c_: 4xz9 C: [277657]
      automated match to d3s1xa_
      complexed with act, g3p, gol, pdo
    4. 2085920Domain d4xz9d_: 4xz9 D: [277658]
      automated match to d3s1xa_
      complexed with act, g3p, gol, pdo
    5. 2085921Domain d4xz9e_: 4xz9 E: [277660]
      automated match to d3s1xa_
      complexed with act, g3p, gol, pdo

More info for Species Thermoplasma acidophilum [TaxId:273075] from c.1.10.1 automated matches

Timeline for Species Thermoplasma acidophilum [TaxId:273075] from c.1.10.1 automated matches: