SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Mycobacterium abscessus [TaxId: 561007]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2113903Family c.37.1.0: automated matches [191323] (1 protein)
    not a true family
  6. 2113904Protein automated matches [190123] (123 species)
    not a true protein
  7. 2114499Species Mycobacterium abscessus [TaxId:561007] [189689] (2 PDB entries)

PDB entries in Species: Mycobacterium abscessus [TaxId: 561007]:

  1. Domain(s) for 3r8c:
    1. 2114500Domain d3r8ca1: 3r8c A:2-218 [184845]
      Other proteins in same PDB: d3r8ca2, d3r8cb2
      automated match to d1q3ta_
    2. 2114501Domain d3r8cb1: 3r8c B:2-218 [184846]
      Other proteins in same PDB: d3r8ca2, d3r8cb2
      automated match to d1q3ta_
  2. Domain(s) for 4die:
    1. 2114502Domain d4diea1: 4die A:2-217 [201713]
      Other proteins in same PDB: d4diea2, d4dieb2, d4diec2, d4died2
      automated match to d3r8ca_
      complexed with c5p, po4
    2. 2114503Domain d4dieb1: 4die B:2-218 [201714]
      Other proteins in same PDB: d4diea2, d4dieb2, d4diec2, d4died2
      automated match to d3r8ca_
      complexed with c5p, po4
    3. 2114504Domain d4diec1: 4die C:2-218 [201715]
      Other proteins in same PDB: d4diea2, d4dieb2, d4diec2, d4died2
      automated match to d3r8ca_
      complexed with c5p, po4
    4. 2114505Domain d4died1: 4die D:2-218 [196067]
      Other proteins in same PDB: d4diea2, d4dieb2, d4diec2, d4died2
      automated match to d3r8ca_
      complexed with c5p, po4

More info for Species Mycobacterium abscessus [TaxId:561007] from c.37.1.0 automated matches

Timeline for Species Mycobacterium abscessus [TaxId:561007] from c.37.1.0 automated matches: