SCOPe 2.05: Species: Escherichia coli K-12 [TaxId: 83333]

Lineage for Species: Escherichia coli K-12 [TaxId: 83333]

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.119: DAK1/DegV-like [82548] (1 superfamily)
2 different domains; d1: [core: 3 layers, a/b/a; parallel sheet of 5 strands, order: 2134]; D2: [2 layers, a/b; mixed sheet of 6 strands, order 321645; strands 2 and 6 are antiparallel to the rest]

Superfamily c.119.1: DAK1/DegV-like [82549] (3 families)

(S)

domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different

Family c.119.1.2: DAK1 [109613] (3 proteins)
Pfam PF02733
Protein automated matches [191219] (1 species)
not a true protein
Species Escherichia coli K-12 [TaxId:83333] [189602] (6 PDB entries)

PDB entries in Species: Escherichia coli K-12 [TaxId: 83333]:

Domain(s) for 3pnk:
1. Domain d3pnka_: 3pnk A: [183872]
  automated match to d1oi2a_
  complexed with gol
2. Domain d3pnkb_: 3pnk B: [183873]
  automated match to d1oi2a_
  complexed with gol
Domain(s) for 3pnl:
- Domain d3pnla_: 3pnl A: [183874]
  Other proteins in same PDB: d3pnlb_
  automated match to d1oi2a_
  complexed with adp, gol, mg
Domain(s) for 3pnm:
1. Domain d3pnma_: 3pnm A: [183876]
  automated match to d1oi2a_
2. Domain d3pnmb_: 3pnm B: [183877]
  automated match to d1oi2a_
3. Domain d3pnmc_: 3pnm C: [183878]
  automated match to d1oi2a_
4. Domain d3pnmd_: 3pnm D: [183879]
  automated match to d1oi2a_
Domain(s) for 3pno:
1. Domain d3pnoa_: 3pno A: [183880]
  automated match to d1oi2a_
2. Domain d3pnob_: 3pno B: [183881]
  automated match to d1oi2a_
3. Domain d3pnoc_: 3pno C: [183882]
  automated match to d1oi2a_
4. Domain d3pnod_: 3pno D: [183883]
  automated match to d1oi2a_
Domain(s) for 3pnq:
1. Domain d3pnqa_: 3pnq A: [183884]
  automated match to d1oi2a_
  complexed with 2ha
2. Domain d3pnqb_: 3pnq B: [183885]
  automated match to d1oi2a_
  complexed with 2ha
3. Domain d3pnqc_: 3pnq C: [183886]
  automated match to d1oi2a_
  complexed with 2ha
4. Domain d3pnqd_: 3pnq D: [183887]
  automated match to d1oi2a_
  complexed with 2ha
Domain(s) for 4lry:
1. Domain d4lrya_: 4lry A: [238003]
  automated match to d4lryb_
  complexed with gol
2. Domain d4lryb_: 4lry B: [236455]
  automated match to d3pnla_
  complexed with gol

More info for Species Escherichia coli K-12 [TaxId:83333] from c.119.1.2 automated matches

Timeline for Species Escherichia coli K-12 [TaxId:83333] from c.119.1.2 automated matches:

Species Escherichia coli K-12 [TaxId:83333] from c.119.1.2 automated matches first appeared in SCOPe 2.01
Species Escherichia coli K-12 [TaxId:83333] from c.119.1.2 automated matches appears in SCOPe 2.04
Species Escherichia coli K-12 [TaxId:83333] from c.119.1.2 automated matches appears in SCOPe 2.06
Species Escherichia coli K-12 [TaxId:83333] from c.119.1.2 automated matches appears in the current release, SCOPe 2.08