Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1402144Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1402145Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1402146Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1402659Protein automated matches [190118] (8 species)
    not a true protein
  7. 1402675Species Human (Homo sapiens) [TaxId:9606] [189560] (36 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1wyw:
  2. Domain(s) for 1y8r:
    1. 1402740Domain d1y8rc_: 1y8r C: [122761]
      automated match to d1a5r__
      complexed with atp, mg, zn
    2. 1402741Domain d1y8rf_: 1y8r F: [122762]
      automated match to d1a5r__
      complexed with atp, mg, zn
  3. Domain(s) for 2bkr:
  4. Domain(s) for 2c9w:
  5. Domain(s) for 2d07:
  6. Domain(s) for 2g4d:
    1. 1402747Domain d2g4db_: 2g4d B: [134590]
      Other proteins in same PDB: d2g4da1, d2g4dc_
      automated match to d1y8rc_
      mutant
    2. 1402748Domain d2g4dd_: 2g4d D: [134591]
      Other proteins in same PDB: d2g4da1, d2g4dc_
      automated match to d1y8rc_
      mutant
  7. Domain(s) for 2gbj:
    1. 1402678Domain d2gbja_: 2gbj A: [164626]
      automated match to d1aara_
      mutant
    2. 1402679Domain d2gbjb_: 2gbj B: [164627]
      automated match to d1aara_
      mutant
  8. Domain(s) for 2gbk:
    1. 1402707Domain d2gbka_: 2gbk A: [164628]
      automated match to d1aara_
      mutant
    2. 1402708Domain d2gbkb_: 2gbk B: [164629]
      automated match to d1aara_
      mutant
    3. 1402709Domain d2gbkc_: 2gbk C: [164630]
      automated match to d1aara_
      mutant
    4. 1402710Domain d2gbkd_: 2gbk D: [164631]
      automated match to d1aara_
      mutant
  9. Domain(s) for 2gbm:
    1. 1402685Domain d2gbma_: 2gbm A: [164632]
      automated match to d1aara_
      complexed with ars; mutant
    2. 1402686Domain d2gbmb_: 2gbm B: [164633]
      automated match to d1aara_
      complexed with ars; mutant
    3. 1402687Domain d2gbmc_: 2gbm C: [164634]
      automated match to d1aara_
      complexed with ars; mutant
    4. 1402688Domain d2gbmd_: 2gbm D: [164635]
      automated match to d1aara_
      complexed with ars; mutant
  10. Domain(s) for 2gbn:
  11. Domain(s) for 2gbr:
    1. 1402704Domain d2gbra_: 2gbr A: [164637]
      automated match to d1aara_
      complexed with cd; mutant
    2. 1402705Domain d2gbrb_: 2gbr B: [164638]
      automated match to d1aara_
      complexed with cd; mutant
    3. 1402706Domain d2gbrc_: 2gbr C: [164639]
      automated match to d1aara_
      complexed with cd; mutant
  12. Domain(s) for 2io1:
    1. 1402732Domain d2io1b_: 2io1 B: [137537]
      Other proteins in same PDB: d2io1a_, d2io1c_, d2io1e_
      automated match to d1wm2a_
    2. 1402733Domain d2io1d_: 2io1 D: [137538]
      Other proteins in same PDB: d2io1a_, d2io1c_, d2io1e_
      automated match to d1wm2a_
    3. 1402734Domain d2io1f_: 2io1 F: [137539]
      Other proteins in same PDB: d2io1a_, d2io1c_, d2io1e_
      automated match to d1wm2a_
  13. Domain(s) for 2izv:
  14. Domain(s) for 2o6v:
    1. 1402727Domain d2o6vb_: 2o6v B: [138923]
      Other proteins in same PDB: d2o6va_, d2o6vc_, d2o6vd1, d2o6ve_, d2o6vg_, d2o6vh_
      automated match to d1aara_
      complexed with mes, so4
    2. 1402728Domain d2o6vf_: 2o6v F: [138926]
      Other proteins in same PDB: d2o6va_, d2o6vc_, d2o6vd1, d2o6ve_, d2o6vg_, d2o6vh_
      automated match to d1aara_
      complexed with mes, so4
  15. Domain(s) for 2wyq:
  16. Domain(s) for 2zcb:
    1. 1402689Domain d2zcba_: 2zcb A: [154336]
      automated match to d1aara_
      complexed with zn
    2. 1402690Domain d2zcbb_: 2zcb B: [161592]
      automated match to d1aara_
      complexed with zn
    3. 1402691Domain d2zcbc_: 2zcb C: [161593]
      automated match to d1aara_
      complexed with zn
  17. Domain(s) for 3jsv:
  18. Domain(s) for 3k9p:
  19. Domain(s) for 3nob:
    1. 1402717Domain d3noba_: 3nob A: [182440]
      automated match to d1aara_
      complexed with so4
    2. 1402718Domain d3nobb_: 3nob B: [182441]
      automated match to d1aara_
      complexed with so4
    3. 1402719Domain d3nobc_: 3nob C: [182442]
      automated match to d1aara_
      complexed with so4
    4. 1402720Domain d3nobd_: 3nob D: [182443]
      automated match to d1aara_
      complexed with so4
    5. 1402721Domain d3nobe_: 3nob E: [182444]
      automated match to d1aara_
      complexed with so4
    6. 1402722Domain d3nobf_: 3nob F: [182445]
      automated match to d1aara_
      complexed with so4
    7. 1402723Domain d3nobg_: 3nob G: [182446]
      automated match to d1aara_
      complexed with so4
    8. 1402724Domain d3nobh_: 3nob H: [182447]
      automated match to d1aara_
      complexed with so4
  20. Domain(s) for 3pse:
    1. 1402702Domain d3pseb1: 3pse B:4-78 [233268]
      automated match to d1z2ma1
      complexed with 3cn, gol
    2. 1402703Domain d3pseb2: 3pse B:79-156 [233269]
      automated match to d1z2ma2
      complexed with 3cn, gol
  21. Domain(s) for 3r66:
    1. 1402725Domain d3r66c2: 3r66 C:79-154 [233411]
      Other proteins in same PDB: d3r66a_, d3r66b_, d3r66c1, d3r66d1
      automated match to d1z2ma2
    2. 1402726Domain d3r66d2: 3r66 D:79-154 [233412]
      Other proteins in same PDB: d3r66a_, d3r66b_, d3r66c1, d3r66d1
      automated match to d1z2ma2
  22. Domain(s) for 3rt3:
    1. 1402698Domain d3rt3b1: 3rt3 B:3-78 [233498]
      Other proteins in same PDB: d3rt3c_
      automated match to d1z2ma1
      complexed with sin
    2. 1402699Domain d3rt3b2: 3rt3 B:79-155 [233499]
      Other proteins in same PDB: d3rt3c_
      automated match to d1z2ma2
      complexed with sin
  23. Domain(s) for 3rzw:
    1. 1402711Domain d3rzwc_: 3rzw C: [185230]
      Other proteins in same PDB: d3rzwa_
      automated match to d1a5ra_
      complexed with gol
    2. 1402712Domain d3rzwd_: 3rzw D: [185231]
      Other proteins in same PDB: d3rzwa_
      automated match to d1a5ra_
      complexed with gol
  24. Domain(s) for 3uin:
  25. Domain(s) for 3uio:
  26. Domain(s) for 3zkj:
    1. 1402736Domain d3zkjc_: 3zkj C: [201328]
      Other proteins in same PDB: d3zkjb_, d3zkje_
      complexed with cl, edo, peg
    2. 1402737Domain d3zkjf_: 3zkj F: [201330]
      Other proteins in same PDB: d3zkjb_, d3zkje_
      complexed with cl, edo, peg
  27. Domain(s) for 3zo5:
  28. Domain(s) for 4ap4:
    1. 1402713Domain d4ap4c_: 4ap4 C: [194912]
      Other proteins in same PDB: d4ap4b_, d4ap4e_
      automated match to d3nobh_
      complexed with zn
    2. 1402714Domain d4ap4f_: 4ap4 F: [194913]
      Other proteins in same PDB: d4ap4b_, d4ap4e_
      automated match to d3nobh_
      complexed with zn
  29. Domain(s) for 4auq:
    1. 1402715Domain d4auqc_: 4auq C: [194816]
      Other proteins in same PDB: d4auqa_, d4auqd_
      automated match to d3nheb_
      complexed with zn
    2. 1402716Domain d4auqf_: 4auq F: [194818]
      Other proteins in same PDB: d4auqa_, d4auqd_
      automated match to d3nheb_
      complexed with zn
  30. Domain(s) for 4b95:
  31. Domain(s) for 4dwf:
    1. 1402694Domain d4dwfa_: 4dwf A: [195743]
      automated match to d1wx9a1
      complexed with so4
    2. 1402695Domain d4dwfb_: 4dwf B: [201746]
      automated match to d4dwfa_
      complexed with so4
  32. Domain(s) for 4eew:
    1. 1402676Domain d4eewa_: 4eew A: [201835]
      automated match to d4eewb_
    2. 1402677Domain d4eewb_: 4eew B: [195625]
      automated match to d1wx9a1
  33. Domain(s) for 4hcp:
  34. Domain(s) for 4hjk:
  35. Domain(s) for 4hk2:
    1. 1402680Domain d4hk2a_: 4hk2 A: [202442]
      automated match to d4hk2c_
      complexed with so4
    2. 1402681Domain d4hk2b_: 4hk2 B: [202443]
      automated match to d4hk2c_
      complexed with so4
    3. 1402682Domain d4hk2c_: 4hk2 C: [193362]
      automated match to d3nobh_
      complexed with so4
    4. 1402683Domain d4hk2d_: 4hk2 D: [202444]
      automated match to d4hk2c_
      complexed with so4
  36. Domain(s) for 4mdk:
    1. 1402743Domain d4mdke_: 4mdk E: [229684]
      Other proteins in same PDB: d4mdka_, d4mdkb_, d4mdkc_, d4mdkd_
      automated match to d4ap4f_
      complexed with u94
    2. 1402744Domain d4mdkf_: 4mdk F: [229679]
      Other proteins in same PDB: d4mdka_, d4mdkb_, d4mdkc_, d4mdkd_
      automated match to d4ap4f_
      complexed with u94
    3. 1402745Domain d4mdkg_: 4mdk G: [229683]
      Other proteins in same PDB: d4mdka_, d4mdkb_, d4mdkc_, d4mdkd_
      automated match to d4ap4c_
      complexed with u94
    4. 1402746Domain d4mdkh_: 4mdk H: [229682]
      Other proteins in same PDB: d4mdka_, d4mdkb_, d4mdkc_, d4mdkd_
      automated match to d4ap4f_
      complexed with u94

More info for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.1 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.1 automated matches: