Lineage for Species: Helicobacter pylori [TaxId: 85963]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2125386Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2125403Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families) (S)
    complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
  5. 2126300Family c.56.2.0: automated matches [191488] (1 protein)
    not a true family
  6. 2126301Protein automated matches [190781] (41 species)
    not a true protein
  7. 2126433Species Helicobacter pylori [TaxId:85963] [189517] (16 PDB entries)

PDB entries in Species: Helicobacter pylori [TaxId: 85963]:

  1. Domain(s) for 3nm4:
    1. 2126436Domain d3nm4a_: 3nm4 A: [182385]
      automated match to d1jysa_
      complexed with edo, trs
    2. 2126437Domain d3nm4b_: 3nm4 B: [182386]
      automated match to d1jysa_
      complexed with edo, trs
  2. Domain(s) for 3nm5:
    1. 2126438Domain d3nm5a_: 3nm5 A: [182387]
      automated match to d1jysa_
      complexed with fmc
    2. 2126439Domain d3nm5b_: 3nm5 B: [182388]
      automated match to d1jysa_
      complexed with fmc
  3. Domain(s) for 3nm6:
  4. Domain(s) for 4ffs:
  5. Domain(s) for 4oy3:
  6. Domain(s) for 4p54:
  7. Domain(s) for 4wkn:
  8. Domain(s) for 4wko:
  9. Domain(s) for 4wkp:
    1. 2126442Domain d4wkpa1: 4wkp A:2-230 [279637]
      Other proteins in same PDB: d4wkpa2, d4wkpb2, d4wkpc2, d4wkpd2
      automated match to d3nm6b_
      complexed with 3qa, so4
    2. 2126443Domain d4wkpb1: 4wkp B:2-230 [279636]
      Other proteins in same PDB: d4wkpa2, d4wkpb2, d4wkpc2, d4wkpd2
      automated match to d3nm6b_
      complexed with 3qa, so4
    3. 2126444Domain d4wkpc1: 4wkp C:2-230 [279640]
      Other proteins in same PDB: d4wkpa2, d4wkpb2, d4wkpc2, d4wkpd2
      automated match to d3nm6b_
      complexed with 3qa, so4
    4. 2126445Domain d4wkpd1: 4wkp D:2-230 [279638]
      Other proteins in same PDB: d4wkpa2, d4wkpb2, d4wkpc2, d4wkpd2
      automated match to d3nm6b_
      complexed with 3qa, so4
  10. Domain(s) for 4ynb:
  11. Domain(s) for 4yo8:
    1. 2126449Domain d4yo8a1: 4yo8 A:3-231 [279655]
      Other proteins in same PDB: d4yo8a2, d4yo8b2
      automated match to d3nm6b_
      complexed with 4ez, zn
    2. 2126450Domain d4yo8b1: 4yo8 B:3-231 [279656]
      Other proteins in same PDB: d4yo8a2, d4yo8b2
      automated match to d3nm6b_
      complexed with 4ez, zn
  12. Domain(s) for 5ccd:
  13. Domain(s) for 5cce:
  14. Domain(s) for 5jpc:
  15. Domain(s) for 5k1z:
  16. Domain(s) for 5kb3:

More info for Species Helicobacter pylori [TaxId:85963] from c.56.2.0 automated matches

Timeline for Species Helicobacter pylori [TaxId:85963] from c.56.2.0 automated matches: