Lineage for Species: Vibrio cholerae [TaxId: 243277]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2090553Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 protein domains)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
  6. 2091795Protein automated matches [190085] (51 species)
    not a true protein
  7. 2092250Species Vibrio cholerae [TaxId:243277] [189479] (8 PDB entries)

PDB entries in Species: Vibrio cholerae [TaxId: 243277]:

  1. Domain(s) for 3op4:
    1. 2092252Domain d3op4a_: 3op4 A: [183217]
      automated match to d1q7ba_
      complexed with act, nap
    2. 2092253Domain d3op4b_: 3op4 B: [191802]
      automated match to d3rshb_
      complexed with act, nap
  2. Domain(s) for 3rro:
    1. 2092259Domain d3rroa_: 3rro A: [185132]
      automated match to d1q7ba_
      complexed with cl, edo, gol, pge, so4
    2. 2092260Domain d3rrob_: 3rro B: [185133]
      automated match to d1q7ba_
      complexed with cl, edo, gol, pge, so4
  3. Domain(s) for 3rsh:
    1. 2092257Domain d3rsha_: 3rsh A: [185146]
      automated match to d1q7ba_
      complexed with edo, nap, so4, unx
    2. 2092258Domain d3rshb_: 3rsh B: [185147]
      automated match to d1q7ba_
      complexed with edo, nap, so4, unx
  4. Domain(s) for 3tzh:
  5. Domain(s) for 3tzk:
  6. Domain(s) for 3u09:
    1. 2092254Domain d3u09a1: 3u09 A:5-248 [186047]
      Other proteins in same PDB: d3u09a2, d3u09b2
      automated match to d1q7ba_
      complexed with so4, unx
    2. 2092255Domain d3u09b1: 3u09 B:5-248 [186048]
      Other proteins in same PDB: d3u09a2, d3u09b2
      automated match to d1q7ba_
      complexed with so4, unx
  7. Domain(s) for 4i08:
    1. 2092261Domain d4i08a1: 4i08 A:5-248 [192571]
      Other proteins in same PDB: d4i08a2, d4i08b2
      automated match to d3rshb_
      complexed with edo, ndp, so4
    2. 2092262Domain d4i08b1: 4i08 B:5-248 [192839]
      Other proteins in same PDB: d4i08a2, d4i08b2
      automated match to d3rshb_
      complexed with edo, ndp, so4
  8. Domain(s) for 5end:
    1. 2092263Domain d5enda1: 5end A:5-246 [280021]
      Other proteins in same PDB: d5enda2, d5endb2
      automated match to d3rshb_
      complexed with gol
    2. 2092264Domain d5endb1: 5end B:5-246 [280022]
      Other proteins in same PDB: d5enda2, d5endb2
      automated match to d3rshb_
      complexed with gol

More info for Species Vibrio cholerae [TaxId:243277] from c.2.1.2 automated matches

Timeline for Species Vibrio cholerae [TaxId:243277] from c.2.1.2 automated matches: