Lineage for Species: Vibrio cholerae [TaxId: 243277]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2841375Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
    has additional subdomain(s) that are not in the common domain
  6. 2842913Protein automated matches [190085] (59 species)
    not a true protein
  7. 2843511Species Vibrio cholerae [TaxId:243277] [189479] (8 PDB entries)

PDB entries in Species: Vibrio cholerae [TaxId: 243277]:

  1. Domain(s) for 3op4:
    1. 2843512Domain d3op4a_: 3op4 A: [183217]
      automated match to d1q7ba_
      complexed with act, nap
    2. 2843513Domain d3op4b_: 3op4 B: [191802]
      automated match to d3rshb_
      complexed with act, nap
  2. Domain(s) for 3rro:
    1. 2843519Domain d3rroa_: 3rro A: [185132]
      automated match to d1q7ba_
      complexed with cl, edo, gol, pge, so4
    2. 2843520Domain d3rrob_: 3rro B: [185133]
      automated match to d1q7ba_
      complexed with cl, edo, gol, pge, so4
  3. Domain(s) for 3rsh:
    1. 2843517Domain d3rsha_: 3rsh A: [185146]
      automated match to d1q7ba_
      complexed with edo, nap, so4, unx
    2. 2843518Domain d3rshb_: 3rsh B: [185147]
      automated match to d1q7ba_
      complexed with edo, nap, so4, unx
  4. Domain(s) for 3tzh:
  5. Domain(s) for 3tzk:
  6. Domain(s) for 3u09:
    1. 2843514Domain d3u09a1: 3u09 A:5-248 [186047]
      Other proteins in same PDB: d3u09a2, d3u09b2
      automated match to d1q7ba_
      complexed with so4, unx
    2. 2843515Domain d3u09b1: 3u09 B:5-248 [186048]
      Other proteins in same PDB: d3u09a2, d3u09b2
      automated match to d1q7ba_
      complexed with so4, unx
  7. Domain(s) for 4i08:
    1. 2843521Domain d4i08a1: 4i08 A:5-248 [192571]
      Other proteins in same PDB: d4i08a2, d4i08b2
      automated match to d3rshb_
      complexed with edo, ndp, so4
    2. 2843522Domain d4i08b1: 4i08 B:5-248 [192839]
      Other proteins in same PDB: d4i08a2, d4i08b2
      automated match to d3rshb_
      complexed with edo, ndp, so4
  8. Domain(s) for 5end:
    1. 2843524Domain d5enda1: 5end A:5-246 [280021]
      Other proteins in same PDB: d5enda2, d5endb2
      automated match to d3rshb_
      complexed with gol
    2. 2843525Domain d5endb1: 5end B:5-246 [280022]
      Other proteins in same PDB: d5enda2, d5endb2
      automated match to d3rshb_
      complexed with gol

More info for Species Vibrio cholerae [TaxId:243277] from c.2.1.2 automated matches

Timeline for Species Vibrio cholerae [TaxId:243277] from c.2.1.2 automated matches: