Lineage for Species: Xanthomonas oryzae [TaxId: 291331]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2895166Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2895167Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2896671Family c.67.1.0: automated matches [191328] (1 protein)
    not a true family
  6. 2896672Protein automated matches [190151] (166 species)
    not a true protein
  7. 2898204Species Xanthomonas oryzae [TaxId:291331] [189393] (10 PDB entries)

PDB entries in Species: Xanthomonas oryzae [TaxId: 291331]:

  1. Domain(s) for 3nmy:
    1. 2898213Domain d3nmya_: 3nmy A: [306048]
      automated match to d1ukja_
      complexed with bct, bme, gol, plp
    2. 2898214Domain d3nmyb_: 3nmy B: [306049]
      automated match to d1ukja_
      complexed with bct, bme, gol, plp
    3. 2898215Domain d3nmyc_: 3nmy C: [306050]
      automated match to d1ukja_
      complexed with bct, bme, gol, plp
    4. 2898216Domain d3nmyd_: 3nmy D: [306051]
      automated match to d1ukja_
      complexed with bct, bme, gol, plp
  2. Domain(s) for 3nnp:
    1. 2898233Domain d3nnpa_: 3nnp A: [306054]
      automated match to d1ukja_
      complexed with bct, gol, plp
    2. 2898234Domain d3nnpb_: 3nnp B: [306055]
      automated match to d1ukja_
      complexed with bct, gol, plp
  3. Domain(s) for 4ixs:
    1. 2898239Domain d4ixsa_: 4ixs A: [236415]
      automated match to d1ukja_
      complexed with co3, gol
    2. 2898240Domain d4ixsb_: 4ixs B: [237149]
      automated match to d4ixsa_
      complexed with co3, gol
  4. Domain(s) for 4ixz:
    1. 2898229Domain d4ixza_: 4ixz A: [237150]
      automated match to d4ixsa_
      complexed with bct, bme, gol
    2. 2898230Domain d4ixzb_: 4ixz B: [237151]
      automated match to d4ixsa_
      complexed with bct, bme, gol
    3. 2898231Domain d4ixzc_: 4ixz C: [237152]
      automated match to d4ixsa_
      complexed with bct, bme, gol
    4. 2898232Domain d4ixzd_: 4ixz D: [237153]
      automated match to d4ixsa_
      complexed with bct, bme, gol
  5. Domain(s) for 4iy7:
    1. 2898205Domain d4iy7a_: 4iy7 A: [237157]
      automated match to d4ixsa_
      protein/RNA complex; complexed with 0jo, gol, kou, pyr, ser, so4
    2. 2898206Domain d4iy7b_: 4iy7 B: [237159]
      automated match to d4ixsa_
      protein/RNA complex; complexed with 0jo, gol, kou, pyr, ser, so4
    3. 2898207Domain d4iy7c_: 4iy7 C: [237161]
      automated match to d4ixsa_
      protein/RNA complex; complexed with 0jo, gol, kou, pyr, ser, so4
    4. 2898208Domain d4iy7d_: 4iy7 D: [237160]
      automated match to d4ixsa_
      protein/RNA complex; complexed with 0jo, gol, kou, pyr, ser, so4
  6. Domain(s) for 4iyo:
    1. 2898209Domain d4iyoa_: 4iyo A: [237154]
      automated match to d4ixsa_
      complexed with 0jo, gol, nak, pyr, ser, so4
    2. 2898210Domain d4iyob_: 4iyo B: [237155]
      automated match to d4ixsa_
      complexed with 0jo, gol, nak, pyr, ser, so4
    3. 2898211Domain d4iyoc_: 4iyo C: [237156]
      automated match to d4ixsa_
      complexed with 0jo, gol, nak, pyr, ser, so4
    4. 2898212Domain d4iyod_: 4iyo D: [237158]
      automated match to d4ixsa_
      complexed with 0jo, gol, nak, pyr, ser, so4
  7. Domain(s) for 6ld7:
    1. 2898217Domain d6ld7a_: 6ld7 A: [395181]
      automated match to d1cs1a_
      complexed with llp, peg, pge
    2. 2898218Domain d6ld7b_: 6ld7 B: [395149]
      automated match to d1cs1a_
      complexed with llp, peg, pge
    3. 2898219Domain d6ld7c_: 6ld7 C: [395143]
      automated match to d1cs1a_
      complexed with llp, peg, pge
    4. 2898220Domain d6ld7d_: 6ld7 D: [395265]
      automated match to d1cs1a_
      complexed with llp, peg, pge
  8. Domain(s) for 6ld8:
    1. 2898221Domain d6ld8a_: 6ld8 A: [395404]
      automated match to d1cs1a_
      complexed with 0jo, cys
    2. 2898222Domain d6ld8b_: 6ld8 B: [395361]
      automated match to d1cs1a_
      complexed with 0jo, cys
    3. 2898223Domain d6ld8c_: 6ld8 C: [395349]
      automated match to d1cs1a_
      complexed with 0jo, cys
    4. 2898224Domain d6ld8d_: 6ld8 D: [395219]
      automated match to d1cs1a_
      complexed with 0jo, cys
  9. Domain(s) for 6ld9:
    1. 2898235Domain d6ld9a_: 6ld9 A: [395109]
      automated match to d1cs1a_
      complexed with e9u
    2. 2898236Domain d6ld9b_: 6ld9 B: [395160]
      automated match to d1cs1a_
      complexed with e9u
    3. 2898237Domain d6ld9c_: 6ld9 C: [395173]
      automated match to d1cs1a_
      complexed with e9u
    4. 2898238Domain d6ld9d_: 6ld9 D: [395107]
      automated match to d1cs1a_
      complexed with e9u
  10. Domain(s) for 6lgo:
    1. 2898225Domain d6lgoa_: 6lgo A: [395167]
      automated match to d1cs1a_
      complexed with ebo
    2. 2898226Domain d6lgob_: 6lgo B: [395150]
      automated match to d1cs1a_
      complexed with ebo
    3. 2898227Domain d6lgoc_: 6lgo C: [395180]
      automated match to d1cs1a_
      complexed with ebo
    4. 2898228Domain d6lgod_: 6lgo D: [395387]
      automated match to d1cs1a_
      complexed with ebo

More info for Species Xanthomonas oryzae [TaxId:291331] from c.67.1.0 automated matches

Timeline for Species Xanthomonas oryzae [TaxId:291331] from c.67.1.0 automated matches: