Lineage for Species: Yersinia pestis [TaxId: 214092]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150174Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2150175Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2150176Family c.116.1.1: SpoU-like RNA 2'-O ribose methyltransferase [75218] (5 protein domains)
    contains extra strand (3) in the parallel beta-sheet, order 321546
  6. 2150197Protein automated matches [191165] (2 species)
    not a true protein
  7. 2150200Species Yersinia pestis [TaxId:214092] [189377] (2 PDB entries)

PDB entries in Species: Yersinia pestis [TaxId: 214092]:

  1. Domain(s) for 3n4j:
  2. Domain(s) for 3n4k:
    1. 2150202Domain d3n4ka1: 3n4k A:1-161 [181894]
      Other proteins in same PDB: d3n4ka2, d3n4kb2
      automated match to d1j85a_
      protein/RNA complex; complexed with sah
    2. 2150203Domain d3n4kb1: 3n4k B:1-159 [181895]
      Other proteins in same PDB: d3n4ka2, d3n4kb2
      automated match to d1j85a_
      protein/RNA complex; complexed with sah

More info for Species Yersinia pestis [TaxId:214092] from c.116.1.1 automated matches

Timeline for Species Yersinia pestis [TaxId:214092] from c.116.1.1 automated matches: