Lineage for Species: Streptomyces avidinii [TaxId: 1895]

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1552675Fold b.61: Streptavidin-like [50875] (8 superfamilies)
    barrel, closed; n=8, S=10; meander
  4. 1552676Superfamily b.61.1: Avidin/streptavidin [50876] (2 families) (S)
  5. 1552677Family b.61.1.1: Avidin/streptavidin [50877] (3 proteins)
  6. 1552986Protein automated matches [190191] (2 species)
    not a true protein
  7. 1553062Species Streptomyces avidinii [TaxId:1895] [189343] (30 PDB entries)

PDB entries in Species: Streptomyces avidinii [TaxId: 1895]:

  1. Domain(s) for 2bc3:
  2. Domain(s) for 2qcb:
  3. Domain(s) for 2wpu:
  4. Domain(s) for 2y3e:
    1. 1553074Domain d2y3ea_: 2y3e A: [170556]
      automated match to d1n9mc_
      complexed with gol
    2. 1553075Domain d2y3eb_: 2y3e B: [170557]
      automated match to d1n9mc_
      complexed with gol
  5. Domain(s) for 2y3f:
  6. Domain(s) for 3mg5:
    1. 1553067Domain d3mg5a_: 3mg5 A: [181113]
      automated match to d1n9mc_
      complexed with btn, gol; mutant
    2. 1553068Domain d3mg5b_: 3mg5 B: [181114]
      automated match to d1n9mc_
      complexed with btn, gol; mutant
    3. 1553069Domain d3mg5c_: 3mg5 C: [181115]
      automated match to d1n9mc_
      complexed with btn, gol; mutant
    4. 1553070Domain d3mg5d_: 3mg5 D: [181116]
      automated match to d1n9mc_
      complexed with btn, gol; mutant
  7. Domain(s) for 3pk2:
  8. Domain(s) for 3rdm:
  9. Domain(s) for 3rdo:
  10. Domain(s) for 3rdq:
  11. Domain(s) for 3rds:
  12. Domain(s) for 3rdu:
  13. Domain(s) for 3rdx:
    1. 1553108Domain d3rdxa_: 3rdx A: [215744]
      automated match to d1mm9a_
      complexed with gol
    2. 1553109Domain d3rdxb_: 3rdx B: [215745]
      automated match to d1mm9a_
      complexed with gol
  14. Domain(s) for 3re5:
  15. Domain(s) for 3re6:
  16. Domain(s) for 3t6f:
    1. 1553065Domain d3t6fa_: 3t6f A: [185662]
      automated match to d1n9mc_
      complexed with bso, btn, gol, so4
    2. 1553066Domain d3t6fb_: 3t6f B: [185663]
      automated match to d1n9mc_
      complexed with bso, btn, gol, so4
  17. Domain(s) for 3t6l:
  18. Domain(s) for 4bx5:
    1. 1553083Domain d4bx5a_: 4bx5 A: [228157]
      Other proteins in same PDB: d4bx5b_, d4bx5d_
      automated match to d4jnja_
      complexed with edo, pg4
    2. 1553084Domain d4bx5c_: 4bx5 C: [228156]
      Other proteins in same PDB: d4bx5b_, d4bx5d_
      automated match to d4jnja_
      complexed with edo, pg4
  19. Domain(s) for 4bx6:
    1. 1553091Domain d4bx6a_: 4bx6 A: [228158]
      automated match to d4jnja_
      complexed with mpd
    2. 1553092Domain d4bx6b_: 4bx6 B: [234282]
      automated match to d4bx6c_
      complexed with mpd
    3. 1553093Domain d4bx6c_: 4bx6 C: [228159]
      automated match to d4jnja_
      complexed with mpd
    4. 1553094Domain d4bx6d_: 4bx6 D: [234284]
      automated match to d4bx6a_
      complexed with mpd
  20. Domain(s) for 4bx7:
    1. 1553115Domain d4bx7a_: 4bx7 A: [228160]
      automated match to d4jnja_
      complexed with b4f, mpd
    2. 1553116Domain d4bx7b_: 4bx7 B: [234283]
      automated match to d4bx6c_
      complexed with b4f, mpd
  21. Domain(s) for 4cph:
    1. 1553102Domain d4cpha_: 4cph A: [258649]
      automated match to d1n9mc_
      complexed with lh4
    2. 1553103Domain d4cphb_: 4cph B: [258652]
      automated match to d1n9mc_
      complexed with lh4
    3. 1553104Domain d4cphc_: 4cph C: [258651]
      automated match to d1n9mc_
      complexed with lh4
    4. 1553105Domain d4cphd_: 4cph D: [259186]
      automated match to d1n9mc_
      complexed with lh4
  22. Domain(s) for 4cpi:
    1. 1553087Domain d4cpia_: 4cpi A: [259755]
      automated match to d1n9mc_
      complexed with ca, lh4, peg; mutant
    2. 1553088Domain d4cpib_: 4cpi B: [259187]
      automated match to d1n9mc_
      complexed with ca, lh4, peg; mutant
    3. 1553089Domain d4cpic_: 4cpi C: [258650]
      automated match to d1n9mc_
      complexed with ca, lh4, peg; mutant
  23. Domain(s) for 4dne:
    1. 1553097Domain d4dnea_: 4dne A: [251501]
      automated match to d4ekva_
      complexed with dtb, so4; mutant
    2. 1553098Domain d4dneb_: 4dne B: [251502]
      automated match to d4ekva_
      complexed with dtb, so4; mutant
  24. Domain(s) for 4ekv:
  25. Domain(s) for 4gd9:
    1. 1553078Domain d4gd9a_: 4gd9 A: [202237]
      automated match to d4gd9b_
      complexed with btn, so4
    2. 1553079Domain d4gd9b_: 4gd9 B: [197245]
      automated match to d1swgd_
      complexed with btn, so4
    3. 1553080Domain d4gd9c_: 4gd9 C: [202238]
      automated match to d4gd9b_
      complexed with btn, so4
    4. 1553081Domain d4gd9d_: 4gd9 D: [202239]
      automated match to d4gd9b_
      complexed with btn, so4
  26. Domain(s) for 4gda:
    1. 1553063Domain d4gdaa_: 4gda A: [202240]
      automated match to d4gdab_
      complexed with btn, eoh, gol, so4
    2. 1553064Domain d4gdab_: 4gda B: [197244]
      automated match to d1swgd_
      complexed with btn, eoh, gol, so4
  27. Domain(s) for 4gjs:
    1. 1553100Domain d4gjsa_: 4gjs A: [234478]
      automated match to d4bx5a_
      complexed with 0od, rh
    2. 1553101Domain d4gjsb_: 4gjs B: [234479]
      automated match to d4bx5a_
      complexed with 0od, rh
  28. Domain(s) for 4gjv:
  29. Domain(s) for 4jnj:
    1. 1553110Domain d4jnja_: 4jnj A: [197198]
      automated match to d1rxkb_
      complexed with btn, zn
    2. 1553111Domain d4jnjb_: 4jnj B: [202749]
      automated match to d4jnja_
      complexed with btn, zn
    3. 1553112Domain d4jnjc_: 4jnj C: [202750]
      automated match to d4jnja_
      complexed with btn, zn
    4. 1553113Domain d4jnjd_: 4jnj D: [202751]
      automated match to d4jnja_
      complexed with btn, zn
  30. Domain(s) for 4oka:

More info for Species Streptomyces avidinii [TaxId:1895] from b.61.1.1 automated matches

Timeline for Species Streptomyces avidinii [TaxId:1895] from b.61.1.1 automated matches: