Lineage for Species: Streptomyces avidinii [TaxId: 1895]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2063610Fold b.61: Streptavidin-like [50875] (8 superfamilies)
    barrel, closed; n=8, S=10; meander
  4. 2063611Superfamily b.61.1: Avidin/streptavidin [50876] (2 families) (S)
  5. 2063612Family b.61.1.1: Avidin/streptavidin [50877] (3 protein domains)
  6. 2063930Protein automated matches [190191] (2 species)
    not a true protein
  7. 2064009Species Streptomyces avidinii [TaxId:1895] [189343] (50 PDB entries)

PDB entries in Species: Streptomyces avidinii [TaxId: 1895]:

  1. Domain(s) for 2bc3:
    1. 2064048Domain d2bc3a2: 2bc3 A:14-159 [128279]
      Other proteins in same PDB: d2bc3a3
      automated match to d2bc3b_
      complexed with gol, so4
    2. 2064049Domain d2bc3b_: 2bc3 B: [128280]
      Other proteins in same PDB: d2bc3a3
      automated match to d4ekva_
      complexed with gol, so4
  2. Domain(s) for 2qcb:
  3. Domain(s) for 2wpu:
  4. Domain(s) for 2y3e:
    1. 2064031Domain d2y3ea_: 2y3e A: [170556]
      automated match to d1n9mc_
      complexed with gol
    2. 2064032Domain d2y3eb_: 2y3e B: [170557]
      automated match to d1n9mc_
      complexed with gol
  5. Domain(s) for 2y3f:
  6. Domain(s) for 3mg5:
    1. 2064016Domain d3mg5a_: 3mg5 A: [181113]
      automated match to d1n9mc_
      complexed with btn, gol; mutant
    2. 2064017Domain d3mg5b_: 3mg5 B: [181114]
      automated match to d1n9mc_
      complexed with btn, gol; mutant
    3. 2064018Domain d3mg5c_: 3mg5 C: [181115]
      automated match to d1n9mc_
      complexed with btn, gol; mutant
    4. 2064019Domain d3mg5d_: 3mg5 D: [181116]
      automated match to d1n9mc_
      complexed with btn, gol; mutant
  7. Domain(s) for 3pk2:
  8. Domain(s) for 3rdm:
  9. Domain(s) for 3rdo:
  10. Domain(s) for 3rdq:
  11. Domain(s) for 3rds:
  12. Domain(s) for 3rdu:
  13. Domain(s) for 3rdx:
    1. 2064081Domain d3rdxa1: 3rdx A:13-134 [215744]
      Other proteins in same PDB: d3rdxa2, d3rdxb2
      automated match to d1mm9a_
      complexed with gol
    2. 2064082Domain d3rdxb1: 3rdx B:13-135 [215745]
      Other proteins in same PDB: d3rdxa2, d3rdxb2
      automated match to d1mm9a_
      complexed with gol
  14. Domain(s) for 3re5:
  15. Domain(s) for 3re6:
  16. Domain(s) for 3t6f:
    1. 2064014Domain d3t6fa_: 3t6f A: [185662]
      automated match to d1n9mc_
      complexed with bso, btn, gol, so4
    2. 2064015Domain d3t6fb_: 3t6f B: [185663]
      automated match to d1n9mc_
      complexed with bso, btn, gol, so4
  17. Domain(s) for 3t6l:
  18. Domain(s) for 3wyq:
    1. 2064012Domain d3wyqa_: 3wyq A: [268112]
      automated match to d1n9mc_
      complexed with btn, gol, so4; mutant
    2. 2064013Domain d3wyqb_: 3wyq B: [268120]
      automated match to d1n9mc_
      complexed with btn, gol, so4; mutant
  19. Domain(s) for 3wzn:
    1. 2064033Domain d3wzna1: 3wzn A:13-134 [306940]
      Other proteins in same PDB: d3wzna2, d3wznb2
      automated match to d1n9mc_
      complexed with btn, so4; mutant
    2. 2064034Domain d3wznb1: 3wzn B:13-133 [306942]
      Other proteins in same PDB: d3wzna2, d3wznb2
      automated match to d1n9mc_
      complexed with btn, so4; mutant
  20. Domain(s) for 3wzo:
    1. 2064056Domain d3wzoa1: 3wzo A:13-137 [306944]
      Other proteins in same PDB: d3wzoa2, d3wzob2, d3wzoc2, d3wzod2
      automated match to d1n9mc_
      complexed with cd, gol, p6g, zoe; mutant
    2. 2064057Domain d3wzob1: 3wzo B:13-134 [306946]
      Other proteins in same PDB: d3wzoa2, d3wzob2, d3wzoc2, d3wzod2
      automated match to d1n9mc_
      complexed with cd, gol, p6g, zoe; mutant
    3. 2064058Domain d3wzoc1: 3wzo C:13-135 [306948]
      Other proteins in same PDB: d3wzoa2, d3wzob2, d3wzoc2, d3wzod2
      automated match to d1n9mc_
      complexed with cd, gol, p6g, zoe; mutant
    4. 2064059Domain d3wzod1: 3wzo D:13-135 [306950]
      Other proteins in same PDB: d3wzoa2, d3wzob2, d3wzoc2, d3wzod2
      automated match to d1n9mc_
      complexed with cd, gol, p6g, zoe; mutant
  21. Domain(s) for 3wzp:
    1. 2064021Domain d3wzpa1: 3wzp A:13-134 [306952]
      Other proteins in same PDB: d3wzpa2, d3wzpb2, d3wzpc2, d3wzpd2
      automated match to d1n9mc_
      complexed with gol, zof; mutant
    2. 2064022Domain d3wzpb1: 3wzp B:13-133 [306954]
      Other proteins in same PDB: d3wzpa2, d3wzpb2, d3wzpc2, d3wzpd2
      automated match to d1n9mc_
      complexed with gol, zof; mutant
    3. 2064023Domain d3wzpc1: 3wzp C:13-134 [306956]
      Other proteins in same PDB: d3wzpa2, d3wzpb2, d3wzpc2, d3wzpd2
      automated match to d1n9mc_
      complexed with gol, zof; mutant
    4. 2064024Domain d3wzpd1: 3wzp D:13-133 [306958]
      Other proteins in same PDB: d3wzpa2, d3wzpb2, d3wzpc2, d3wzpd2
      automated match to d1n9mc_
      complexed with gol, zof; mutant
  22. Domain(s) for 3wzq:
    1. 2064076Domain d3wzqa1: 3wzq A:13-135 [306960]
      Other proteins in same PDB: d3wzqa2, d3wzqb2, d3wzqc2, d3wzqd2
      automated match to d4ekva_
      complexed with p6g, zof; mutant
    2. 2064077Domain d3wzqb1: 3wzq B:13-135 [306962]
      Other proteins in same PDB: d3wzqa2, d3wzqb2, d3wzqc2, d3wzqd2
      automated match to d4ekva_
      complexed with p6g, zof; mutant
    3. 2064078Domain d3wzqc1: 3wzq C:13-134 [306964]
      Other proteins in same PDB: d3wzqa2, d3wzqb2, d3wzqc2, d3wzqd2
      automated match to d4ekva_
      complexed with p6g, zof; mutant
    4. 2064079Domain d3wzqd1: 3wzq D:13-135 [306966]
      Other proteins in same PDB: d3wzqa2, d3wzqb2, d3wzqc2, d3wzqd2
      automated match to d4ekva_
      complexed with p6g, zof; mutant
  23. Domain(s) for 3x00:
    1. 2064027Domain d3x00a1: 3x00 A:13-134 [268118]
      Other proteins in same PDB: d3x00a2, d3x00b2, d3x00c2, d3x00d2
      automated match to d4ekva_
      complexed with edn, zof; mutant
    2. 2064028Domain d3x00b1: 3x00 B:13-134 [268114]
      Other proteins in same PDB: d3x00a2, d3x00b2, d3x00c2, d3x00d2
      automated match to d4ekva_
      complexed with edn, zof; mutant
    3. 2064029Domain d3x00c1: 3x00 C:13-134 [268111]
      Other proteins in same PDB: d3x00a2, d3x00b2, d3x00c2, d3x00d2
      automated match to d4ekva_
      complexed with edn, zof; mutant
    4. 2064030Domain d3x00d1: 3x00 D:13-134 [268113]
      Other proteins in same PDB: d3x00a2, d3x00b2, d3x00c2, d3x00d2
      automated match to d4ekva_
      complexed with edn, zof; mutant
  24. Domain(s) for 4bx5:
    1. 2064046Domain d4bx5a_: 4bx5 A: [228157]
      Other proteins in same PDB: d4bx5b_, d4bx5d_
      automated match to d4jnja_
      complexed with edo, pg4
    2. 2064047Domain d4bx5c_: 4bx5 C: [228156]
      Other proteins in same PDB: d4bx5b_, d4bx5d_
      automated match to d4jnja_
      complexed with edo, pg4
  25. Domain(s) for 4bx6:
    1. 2064060Domain d4bx6a_: 4bx6 A: [228158]
      automated match to d4jnja_
      complexed with mpd
    2. 2064061Domain d4bx6b_: 4bx6 B: [234282]
      automated match to d4bx6c_
      complexed with mpd
    3. 2064062Domain d4bx6c_: 4bx6 C: [228159]
      automated match to d4jnja_
      complexed with mpd
    4. 2064063Domain d4bx6d_: 4bx6 D: [234284]
      automated match to d4bx6a_
      complexed with mpd
  26. Domain(s) for 4bx7:
    1. 2064090Domain d4bx7a_: 4bx7 A: [228160]
      automated match to d4jnja_
      complexed with b4f, mpd
    2. 2064091Domain d4bx7b_: 4bx7 B: [234283]
      automated match to d4bx6c_
      complexed with b4f, mpd
  27. Domain(s) for 4cph:
    1. 2064071Domain d4cpha_: 4cph A: [258649]
      automated match to d1n9mc_
      complexed with lh4
    2. 2064072Domain d4cphb_: 4cph B: [258652]
      automated match to d1n9mc_
      complexed with lh4
    3. 2064073Domain d4cphc_: 4cph C: [258651]
      automated match to d1n9mc_
      complexed with lh4
    4. 2064074Domain d4cphd_: 4cph D: [259186]
      automated match to d1n9mc_
      complexed with lh4
  28. Domain(s) for 4cpi:
    1. 2064051Domain d4cpia_: 4cpi A: [259755]
      automated match to d1n9mc_
      complexed with ca, lh4, peg; mutant
    2. 2064052Domain d4cpib_: 4cpi B: [259187]
      automated match to d1n9mc_
      complexed with ca, lh4, peg; mutant
    3. 2064053Domain d4cpic_: 4cpi C: [258650]
      automated match to d1n9mc_
      complexed with ca, lh4, peg; mutant
    4. 2064054Domain d4cpid_: 4cpi D: [262605]
      automated match to d1n9mc_
      complexed with ca, lh4, peg; mutant
  29. Domain(s) for 4dne:
    1. 2064066Domain d4dnea_: 4dne A: [251501]
      automated match to d4ekva_
      complexed with dtb, so4; mutant
    2. 2064067Domain d4dneb_: 4dne B: [251502]
      automated match to d4ekva_
      complexed with dtb, so4; mutant
  30. Domain(s) for 4ekv:
  31. Domain(s) for 4gd9:
    1. 2064041Domain d4gd9a_: 4gd9 A: [202237]
      automated match to d4gd9b_
      complexed with btn, so4
    2. 2064042Domain d4gd9b_: 4gd9 B: [197245]
      automated match to d1swgd_
      complexed with btn, so4
    3. 2064043Domain d4gd9c_: 4gd9 C: [202238]
      automated match to d4gd9b_
      complexed with btn, so4
    4. 2064044Domain d4gd9d_: 4gd9 D: [202239]
      automated match to d4gd9b_
      complexed with btn, so4
  32. Domain(s) for 4gda:
    1. 2064010Domain d4gdaa_: 4gda A: [202240]
      automated match to d4gdab_
      complexed with btn, eoh, gol, so4
    2. 2064011Domain d4gdab_: 4gda B: [197244]
      automated match to d1swgd_
      complexed with btn, eoh, gol, so4
  33. Domain(s) for 4gjs:
    1. 2064069Domain d4gjsa1: 4gjs A:14-134 [234478]
      Other proteins in same PDB: d4gjsa2, d4gjsb2
      automated match to d4bx5a_
      complexed with 0od, rh
    2. 2064070Domain d4gjsb1: 4gjs B:14-134 [234479]
      Other proteins in same PDB: d4gjsa2, d4gjsb2
      automated match to d4bx5a_
      complexed with 0od, rh
  34. Domain(s) for 4gjv:
  35. Domain(s) for 4jnj:
    1. 2064083Domain d4jnja_: 4jnj A: [197198]
      automated match to d1rxkb_
      complexed with btn, zn
    2. 2064084Domain d4jnjb_: 4jnj B: [202749]
      automated match to d4jnja_
      complexed with btn, zn
    3. 2064085Domain d4jnjc_: 4jnj C: [202750]
      automated match to d4jnja_
      complexed with btn, zn
    4. 2064086Domain d4jnjd_: 4jnj D: [202751]
      automated match to d4jnja_
      complexed with btn, zn
  36. Domain(s) for 4oka:
  37. Domain(s) for 4y5d:
    1. 2064035Domain d4y5da_: 4y5d A: [277367]
      automated match to d3ry1b_
      complexed with dms, mt6, p6g, pe3
    2. 2064036Domain d4y5db_: 4y5d B: [277370]
      automated match to d3ry1b_
      complexed with dms, mt6, p6g, pe3
    3. 2064037Domain d4y5dc_: 4y5d C: [277369]
      automated match to d3ry1b_
      complexed with dms, mt6, p6g, pe3
    4. 2064038Domain d4y5dd_: 4y5d D: [277368]
      automated match to d3ry1b_
      complexed with dms, mt6, p6g, pe3
  38. Domain(s) for 4yvb:
    1. 2268876Domain d4yvbb_: 4yvb B: [312182]
      automated match to d3ry1b_
      complexed with btn
    2. 2268881Domain d4yvbc_: 4yvb C: [312187]
      automated match to d3ry1b_
      complexed with btn
    3. 2268924Domain d4yvbd_: 4yvb D: [312230]
      automated match to d3ry1b_
      complexed with btn
    4. 2269337Domain d4yvba_: 4yvb A: [312643]
      automated match to d3ry1b_
      complexed with btn
  39. Domain(s) for 5b5f:
    1. 2287022Domain d5b5fa_: 5b5f A: [330323]
      automated match to d4yvbb_
      complexed with 6f3
    2. 2287025Domain d5b5fb_: 5b5f B: [330326]
      automated match to d4yvbb_
      complexed with 6f3
    3. 2287026Domain d5b5fd_: 5b5f D: [330327]
      automated match to d4yvbb_
      complexed with 6f3
    4. 2287061Domain d5b5fc_: 5b5f C: [330362]
      automated match to d4yvbb_
      complexed with 6f3
  40. Domain(s) for 5b5g:
    1. 2287024Domain d5b5ga_: 5b5g A: [330325]
      automated match to d4yvbb_
      complexed with 6fx, so3
    2. 2287031Domain d5b5gd_: 5b5g D: [330332]
      automated match to d4yvbb_
      complexed with 6fx, so3
    3. 2287041Domain d5b5gc_: 5b5g C: [330342]
      automated match to d4yvbb_
      complexed with 6fx, so3
    4. 2287109Domain d5b5gb_: 5b5g B: [330410]
      automated match to d4yvbb_
      complexed with 6fx, so3
  41. Domain(s) for 5cse:
    1. 2064088Domain d5csea1: 5cse A:14-133 [278926]
      Other proteins in same PDB: d5csea2, d5cseb2
      automated match to d2bc3a_
      complexed with cl, svp
    2. 2064089Domain d5cseb1: 5cse B:14-134 [278928]
      Other proteins in same PDB: d5csea2, d5cseb2
      automated match to d2bc3a_
      complexed with cl, svp
  42. Domain(s) for 5f2b:
  43. Domain(s) for 5ira:
  44. Domain(s) for 5jd2:
    1. 2282959Domain d5jd2d_: 5jd2 D: [326260]
      automated match to d4yvbb_
      complexed with byy
    2. 2282961Domain d5jd2c_: 5jd2 C: [326262]
      automated match to d4yvbb_
      complexed with byy
    3. 2282969Domain d5jd2a_: 5jd2 A: [326270]
      automated match to d4yvbb_
      complexed with byy
    4. 2282995Domain d5jd2b_: 5jd2 B: [326296]
      automated match to d4yvbb_
      complexed with byy
  45. Domain(s) for 5n8t:
    • 2296498Domain d5n8ta_: 5n8t A: [339799]
      automated match to d2bc3b_
      complexed with dal, dgl, dgn, dhi, dle, dly, dth, dtr
  46. Domain(s) for 5to2:
    1. 2290953Domain d5to2c_: 5to2 C: [334254]
      Other proteins in same PDB: d5to2d_
      automated match to d3ry1b_
      complexed with peg
    2. 2290973Domain d5to2b_: 5to2 B: [334274]
      Other proteins in same PDB: d5to2d_
      automated match to d3ry1b_
      complexed with peg
    3. 2291035Domain d5to2a_: 5to2 A: [334336]
      Other proteins in same PDB: d5to2d_
      automated match to d3ry1b_
      complexed with peg
  47. Domain(s) for 5wba:
  48. Domain(s) for 5wbb:
  49. Domain(s) for 5wbd:
  50. Domain(s) for 6anx:

More info for Species Streptomyces avidinii [TaxId:1895] from b.61.1.1 automated matches

Timeline for Species Streptomyces avidinii [TaxId:1895] from b.61.1.1 automated matches: