Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2008476Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 2008477Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 2009679Family a.123.1.0: automated matches [191623] (1 protein)
    not a true family
  6. 2009680Protein automated matches [191142] (6 species)
    not a true protein
  7. 2009693Species Human (Homo sapiens) [TaxId:9606] [189274] (53 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 3b0w:
    1. 2009699Domain d3b0wa_: 3b0w A: [199003]
      automated match to d3b0wb_
      complexed with dgx
    2. 2009700Domain d3b0wb_: 3b0w B: [193702]
      automated match to d3l0la_
      complexed with dgx
  2. Domain(s) for 3cjw:
  3. Domain(s) for 3l0j:
  4. Domain(s) for 3l0l:
    1. 2009696Domain d3l0la_: 3l0l A: [179842]
      automated match to d1n83a_
      protein/DNA complex; complexed with hc3
    2. 2009697Domain d3l0lb_: 3l0l B: [179843]
      automated match to d1n83a_
      protein/DNA complex; complexed with hc3
  5. Domain(s) for 3tx7:
  6. Domain(s) for 4j5w:
  7. Domain(s) for 4nb6:
    1. 2009725Domain d4nb6a_: 4nb6 A: [229950]
      automated match to d4nb6b_
      complexed with 444
    2. 2009726Domain d4nb6b_: 4nb6 B: [229343]
      automated match to d3l0la_
      complexed with 444
  8. Domain(s) for 4qm0:
    1. 2009701Domain d4qm0a_: 4qm0 A: [259707]
      Other proteins in same PDB: d4qm0c2
      automated match to d3l0la_
      complexed with 39k, dms
    2. 2009702Domain d4qm0c1: 4qm0 C:265-507 [263764]
      Other proteins in same PDB: d4qm0c2
      automated match to d3l0la_
      complexed with 39k, dms
  9. Domain(s) for 4udb:
  10. Domain(s) for 4wqp:
    1. 2009703Domain d4wqpa_: 4wqp A: [269087]
      automated match to d1n83a_
      complexed with 3sx, so4
    2. 2009704Domain d4wqpb_: 4wqp B: [269088]
      automated match to d1n83a_
      complexed with 3sx, so4
  11. Domain(s) for 4ymq:
  12. Domain(s) for 4ypq:
  13. Domain(s) for 4zjr:
    1. 2009727Domain d4zjra_: 4zjr A: [274101]
      Other proteins in same PDB: d4zjrc2, d4zjrd2
      automated match to d4nb6b_
      complexed with 4p3
    2. 2009728Domain d4zjrb_: 4zjr B: [274107]
      Other proteins in same PDB: d4zjrc2, d4zjrd2
      automated match to d4nb6b_
      complexed with 4p3
    3. 2009729Domain d4zjrc1: 4zjr C:265-483 [274103]
      Other proteins in same PDB: d4zjrc2, d4zjrd2
      automated match to d4nb6b_
      complexed with 4p3
    4. 2009730Domain d4zjrd1: 4zjr D:1-481 [274104]
      Other proteins in same PDB: d4zjrc2, d4zjrd2
      automated match to d4nb6b_
      complexed with 4p3
  14. Domain(s) for 4zjw:
    1. 2009723Domain d4zjwa_: 4zjw A: [274099]
      automated match to d4nb6b_
      complexed with 4p1
    2. 2009724Domain d4zjwb_: 4zjw B: [274106]
      automated match to d4nb6b_
      complexed with 4p1
  15. Domain(s) for 4zom:
    1. 2009716Domain d4zoma_: 4zom A: [274110]
      automated match to d4nb6b_
      complexed with 4q3
    2. 2009717Domain d4zomb_: 4zom B: [274109]
      automated match to d4nb6b_
      complexed with 4q3
    3. 2009718Domain d4zomc_: 4zom C: [274112]
      automated match to d4nb6b_
      complexed with 4q3
    4. 2009719Domain d4zomd_: 4zom D: [274111]
      automated match to d4nb6b_
      complexed with 4q3
  16. Domain(s) for 5ak2:
    1. 2009712Domain d5ak2a1: 5ak2 A:307-552 [271607]
      Other proteins in same PDB: d5ak2a2
      automated match to d2pjla_
      complexed with 85z
    2. 2009713Domain d5ak2b_: 5ak2 B: [271608]
      Other proteins in same PDB: d5ak2a2
      automated match to d2pjla_
      complexed with 85z
  17. Domain(s) for 5aph:
  18. Domain(s) for 5apj:
  19. Domain(s) for 5apk:
    1. 2009709Domain d5apka1: 5apk A:265-486 [310192]
      Other proteins in same PDB: d5apka2
      automated match to d1n83a_
      complexed with 76e
    2. 2009710Domain d5apkb_: 5apk B: [310194]
      Other proteins in same PDB: d5apka2
      automated match to d1n83a_
      complexed with 76e
  20. Domain(s) for 5ayg:
    1. 2269239Domain d5aygb_: 5ayg B: [312545]
      automated match to d3l0la_
      protein/DNA complex; complexed with 4lq
    2. 2269284Domain d5ayga_: 5ayg A: [312590]
      automated match to d3l0la_
      protein/DNA complex; complexed with 4lq
  21. Domain(s) for 5c4o:
  22. Domain(s) for 5c4s:
  23. Domain(s) for 5c4t:
  24. Domain(s) for 5c4u:
  25. Domain(s) for 5eth:
    1. 2273107Domain d5etha_: 5eth A: [316408]
      automated match to d4zoma_
      complexed with 5rt
    2. 2273347Domain d5ethb_: 5eth B: [316648]
      automated match to d4zoma_
      complexed with 5rt
  26. Domain(s) for 5g42:
  27. Domain(s) for 5g43:
  28. Domain(s) for 5g44:
  29. Domain(s) for 5g45:
  30. Domain(s) for 5g46:
  31. Domain(s) for 5ixk:
    1. 2275195Domain d5ixka_: 5ixk A: [318496]
      automated match to d4zoma_
      complexed with 6ew
    2. 2275204Domain d5ixkb_: 5ixk B: [318505]
      automated match to d4zoma_
      complexed with 6ew
  32. Domain(s) for 5k38:
    1. 2291525Domain d5k38b_: 5k38 B: [334826]
      automated match to d3l0la_
    2. 2291562Domain d5k38a_: 5k38 A: [334863]
      automated match to d3l0la_
  33. Domain(s) for 5k3l:
    1. 2291522Domain d5k3ld_: 5k3l D: [334823]
      automated match to d3l0la_
      complexed with 444
    2. 2291530Domain d5k3la_: 5k3l A: [334831]
      automated match to d3l0la_
      complexed with 444
    3. 2291549Domain d5k3lb_: 5k3l B: [334850]
      automated match to d3l0la_
      complexed with 444
    4. 2291630Domain d5k3lc_: 5k3l C: [334931]
      automated match to d3l0la_
      complexed with 444
  34. Domain(s) for 5k3m:
    1. 2291523Domain d5k3ma_: 5k3m A: [334824]
      automated match to d3l0la_
      complexed with 6q5
    2. 2291528Domain d5k3mb_: 5k3m B: [334829]
      automated match to d3l0la_
      complexed with 6q5
  35. Domain(s) for 5k3n:
    1. 2291524Domain d5k3nd_: 5k3n D: [334825]
      automated match to d3l0la_
      complexed with 6q6
    2. 2291670Domain d5k3na_: 5k3n A: [334971]
      automated match to d3l0la_
      complexed with 6q6
    3. 2291686Domain d5k3nc_: 5k3n C: [334987]
      automated match to d3l0la_
      complexed with 6q6
    4. 2291695Domain d5k3nb_: 5k3n B: [334996]
      automated match to d3l0la_
      complexed with 6q6
  36. Domain(s) for 5k6e:
    1. 2291632Domain d5k6eb_: 5k6e B: [334933]
      automated match to d3l0la_
      complexed with 6qp
    2. 2291721Domain d5k6ea_: 5k6e A: [335022]
      automated match to d3l0la_
      complexed with 6qp
  37. Domain(s) for 5k74:
    1. 2291533Domain d5k74b_: 5k74 B: [334834]
      automated match to d3l0la_
      complexed with 6qw
    2. 2291565Domain d5k74a_: 5k74 A: [334866]
      automated match to d3l0la_
      complexed with 6qw
  38. Domain(s) for 5lwp:
  39. Domain(s) for 5m96:
    1. 2283924Domain d5m96b_: 5m96 B: [327225]
      automated match to d4wqpa_
      complexed with q6y
    2. 2283935Domain d5m96a_: 5m96 A: [327236]
      automated match to d4wqpa_
      complexed with q6y
  40. Domain(s) for 5nti:
    1. 2292375Domain d5ntib_: 5nti B: [335676]
      automated match to d3l0la_
      complexed with c3s
    2. 2292395Domain d5ntid_: 5nti D: [335696]
      automated match to d3l0la_
      complexed with c3s
    3. 2292410Domain d5ntia_: 5nti A: [335711]
      automated match to d3l0la_
      complexed with c3s
    4. 2292456Domain d5ntic_: 5nti C: [335757]
      automated match to d3l0la_
      complexed with c3s
  41. Domain(s) for 5ntk:
    1. 2292458Domain d5ntka_: 5ntk A: [335759]
      automated match to d4wqpa_
      complexed with 99n
    2. 2292540Domain d5ntkb_: 5ntk B: [335841]
      automated match to d4wqpa_
      complexed with 99n
  42. Domain(s) for 5ntn:
    1. 2292417Domain d5ntnb_: 5ntn B: [335718]
      automated match to d3l0la_
      complexed with 98h
    2. 2292436Domain d5ntna_: 5ntn A: [335737]
      automated match to d3l0la_
      complexed with 98h
    3. 2292445Domain d5ntnd_: 5ntn D: [335746]
      automated match to d3l0la_
      complexed with 98h
    4. 2292545Domain d5ntnc_: 5ntn C: [335846]
      automated match to d3l0la_
      complexed with 98h
  43. Domain(s) for 5ntp:
  44. Domain(s) for 5ntq:
    1. 2292415Domain d5ntqa_: 5ntq A: [335716]
      automated match to d3l0la_
      complexed with 444
    2. 2292495Domain d5ntqb_: 5ntq B: [335796]
      automated match to d3l0la_
      complexed with 444
  45. Domain(s) for 5ntw:
    1. 2292386Domain d5ntwa_: 5ntw A: [335687]
      automated match to d3l0la_
      complexed with 98n
    2. 2292391Domain d5ntwb_: 5ntw B: [335692]
      automated match to d3l0la_
      complexed with 98n
    3. 2292402Domain d5ntwc_: 5ntw C: [335703]
      automated match to d3l0la_
      complexed with 98n
    4. 2292425Domain d5ntwd_: 5ntw D: [335726]
      automated match to d3l0la_
      complexed with 98n
  46. Domain(s) for 5nu1:
    1. 2292442Domain d5nu1b_: 5nu1 B: [335743]
      automated match to d3l0la_
      complexed with 8yb
    2. 2292474Domain d5nu1a_: 5nu1 A: [335775]
      automated match to d3l0la_
      complexed with 8yb
  47. Domain(s) for 5ufo:
  48. Domain(s) for 5ufr:
    1. 2289492Domain d5ufrb_: 5ufr B: [332793]
      automated match to d3l0la_
      complexed with 88j
    2. 2289500Domain d5ufra_: 5ufr A: [332801]
      automated match to d3l0la_
      complexed with 88j
  49. Domain(s) for 5vb3:
  50. Domain(s) for 5vb5:
  51. Domain(s) for 5vb6:
  52. Domain(s) for 5vb7:
  53. Domain(s) for 5x8q:
    1. 2291966Domain d5x8qc_: 5x8q C: [335267]
      automated match to d3l0la_
      complexed with 82r; mutant
    2. 2291972Domain d5x8qa_: 5x8q A: [335273]
      automated match to d3l0la_
      complexed with 82r; mutant
    3. 2291983Domain d5x8qg_: 5x8q G: [335284]
      automated match to d3l0la_
      complexed with 82r; mutant
    4. 2292007Domain d5x8qe_: 5x8q E: [335308]
      automated match to d3l0la_
      complexed with 82r; mutant

More info for Species Human (Homo sapiens) [TaxId:9606] from a.123.1.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.123.1.0 automated matches: