Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. Family a.123.1.0: automated matches [191623] (1 protein)
    not a true family
  6. Protein automated matches [191142] (5 species)
    not a true protein
  7. Species Human (Homo sapiens) [TaxId:9606] [189274] (121 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 3b0w:
    1. Domain d3b0wa_: 3b0w A: [199003]
      automated match to d3b0wb_
      complexed with dgx
    2. Domain d3b0wb_: 3b0w B: [193702]
      automated match to d3l0la_
      complexed with dgx
  2. Domain(s) for 3cjw:
  3. Domain(s) for 3l0j:
  4. Domain(s) for 3l0l:
    1. Domain d3l0la_: 3l0l A: [179842]
      automated match to d1n83a_
      protein/DNA complex; complexed with hc3
    2. Domain d3l0lb_: 3l0l B: [179843]
      automated match to d1n83a_
      protein/DNA complex; complexed with hc3
  5. Domain(s) for 3tx7:
  6. Domain(s) for 4j5w:
  7. Domain(s) for 4nb6:
    1. Domain d4nb6a_: 4nb6 A: [229950]
      automated match to d4nb6b_
      complexed with 444
    2. Domain d4nb6b_: 4nb6 B: [229343]
      automated match to d3l0la_
      complexed with 444
  8. Domain(s) for 4qm0:
    1. Domain d4qm0a_: 4qm0 A: [259707]
      Other proteins in same PDB: d4qm0c2
      automated match to d3l0la_
      complexed with 39k, dms
    2. Domain d4qm0c1: 4qm0 C:265-507 [263764]
      Other proteins in same PDB: d4qm0c2
      automated match to d3l0la_
      complexed with 39k, dms
  9. Domain(s) for 4udb:
  10. Domain(s) for 4wqp:
    1. Domain d4wqpa_: 4wqp A: [269087]
      automated match to d1n83a_
      complexed with 3sx, so4
    2. Domain d4wqpb_: 4wqp B: [269088]
      automated match to d1n83a_
      complexed with 3sx, so4
  11. Domain(s) for 4ymq:
  12. Domain(s) for 4ypq:
  13. Domain(s) for 4zjr:
    1. Domain d4zjra_: 4zjr A: [274101]
      Other proteins in same PDB: d4zjrc2, d4zjrd2
      automated match to d4nb6b_
      complexed with 4p3
    2. Domain d4zjrb_: 4zjr B: [274107]
      Other proteins in same PDB: d4zjrc2, d4zjrd2
      automated match to d4nb6b_
      complexed with 4p3
    3. Domain d4zjrc1: 4zjr C:265-483 [274103]
      Other proteins in same PDB: d4zjrc2, d4zjrd2
      automated match to d4nb6b_
      complexed with 4p3
    4. Domain d4zjrd1: 4zjr D:1-481 [274104]
      Other proteins in same PDB: d4zjrc2, d4zjrd2
      automated match to d4nb6b_
      complexed with 4p3
  14. Domain(s) for 4zjw:
    1. Domain d4zjwa_: 4zjw A: [274099]
      automated match to d4nb6b_
      complexed with 4p1
    2. Domain d4zjwb_: 4zjw B: [274106]
      automated match to d4nb6b_
      complexed with 4p1
  15. Domain(s) for 4zom:
    1. Domain d4zoma_: 4zom A: [274110]
      automated match to d4nb6b_
      complexed with 4q3
    2. Domain d4zomb_: 4zom B: [274109]
      automated match to d4nb6b_
      complexed with 4q3
    3. Domain d4zomc_: 4zom C: [274112]
      automated match to d4nb6b_
      complexed with 4q3
    4. Domain d4zomd_: 4zom D: [274111]
      automated match to d4nb6b_
      complexed with 4q3
  16. Domain(s) for 5ak2:
    1. Domain d5ak2a1: 5ak2 A:307-552 [271607]
      Other proteins in same PDB: d5ak2a2
      automated match to d2pjla_
      complexed with 85z
    2. Domain d5ak2b_: 5ak2 B: [271608]
      Other proteins in same PDB: d5ak2a2
      automated match to d2pjla_
      complexed with 85z
  17. Domain(s) for 5aph:
  18. Domain(s) for 5apj:
  19. Domain(s) for 5apk:
    1. Domain d5apka1: 5apk A:265-486 [310192]
      Other proteins in same PDB: d5apka2
      automated match to d1n83a_
      complexed with 76e
    2. Domain d5apkb_: 5apk B: [310194]
      Other proteins in same PDB: d5apka2
      automated match to d1n83a_
      complexed with 76e
  20. Domain(s) for 5ayg:
    1. Domain d5ayga_: 5ayg A: [312590]
      automated match to d3l0la_
      protein/DNA complex; complexed with 4lq
    2. Domain d5aygb_: 5ayg B: [312545]
      automated match to d3l0la_
      protein/DNA complex; complexed with 4lq
  21. Domain(s) for 5c4o:
  22. Domain(s) for 5c4s:
  23. Domain(s) for 5c4t:
  24. Domain(s) for 5c4u:
  25. Domain(s) for 5eth:
    1. Domain d5etha_: 5eth A: [316408]
      automated match to d4zoma_
      complexed with 5rt
    2. Domain d5ethb_: 5eth B: [316648]
      automated match to d4zoma_
      complexed with 5rt
  26. Domain(s) for 5g42:
  27. Domain(s) for 5g43:
  28. Domain(s) for 5g44:
  29. Domain(s) for 5g45:
  30. Domain(s) for 5g46:
  31. Domain(s) for 5ixk:
    1. Domain d5ixka_: 5ixk A: [318496]
      automated match to d4zoma_
      complexed with 6ew
    2. Domain d5ixkb_: 5ixk B: [318505]
      automated match to d4zoma_
      complexed with 6ew
  32. Domain(s) for 5k38:
    1. Domain d5k38a_: 5k38 A: [334863]
      automated match to d3l0la_
    2. Domain d5k38b_: 5k38 B: [334826]
      automated match to d3l0la_
  33. Domain(s) for 5k3l:
    1. Domain d5k3la_: 5k3l A: [334831]
      automated match to d3l0la_
      complexed with 444
    2. Domain d5k3lb_: 5k3l B: [334850]
      automated match to d3l0la_
      complexed with 444
    3. Domain d5k3lc_: 5k3l C: [334931]
      automated match to d3l0la_
      complexed with 444
    4. Domain d5k3ld_: 5k3l D: [334823]
      automated match to d3l0la_
      complexed with 444
  34. Domain(s) for 5k3m:
    1. Domain d5k3ma_: 5k3m A: [334824]
      automated match to d3l0la_
      complexed with 6q5
    2. Domain d5k3mb_: 5k3m B: [334829]
      automated match to d3l0la_
      complexed with 6q5
  35. Domain(s) for 5k3n:
    1. Domain d5k3na_: 5k3n A: [334971]
      automated match to d3l0la_
      complexed with 6q6
    2. Domain d5k3nb_: 5k3n B: [334996]
      automated match to d3l0la_
      complexed with 6q6
    3. Domain d5k3nc_: 5k3n C: [334987]
      automated match to d3l0la_
      complexed with 6q6
    4. Domain d5k3nd_: 5k3n D: [334825]
      automated match to d3l0la_
      complexed with 6q6
  36. Domain(s) for 5k6e:
    1. Domain d5k6ea_: 5k6e A: [335022]
      automated match to d3l0la_
      complexed with 6qp
    2. Domain d5k6eb_: 5k6e B: [334933]
      automated match to d3l0la_
      complexed with 6qp
  37. Domain(s) for 5k74:
    1. Domain d5k74a_: 5k74 A: [334866]
      automated match to d3l0la_
      complexed with 6qw
    2. Domain d5k74b_: 5k74 B: [334834]
      automated match to d3l0la_
      complexed with 6qw
  38. Domain(s) for 5lwp:
  39. Domain(s) for 5m96:
    1. Domain d5m96a_: 5m96 A: [327236]
      automated match to d4wqpa_
      complexed with q6y
    2. Domain d5m96b_: 5m96 B: [327225]
      automated match to d4wqpa_
      complexed with q6y
  40. Domain(s) for 5ni5:
  41. Domain(s) for 5ni7:
  42. Domain(s) for 5ni8:
  43. Domain(s) for 5nib:
  44. Domain(s) for 5nti:
    1. Domain d5ntia_: 5nti A: [335711]
      automated match to d3l0la_
      complexed with c3s
    2. Domain d5ntib_: 5nti B: [335676]
      automated match to d3l0la_
      complexed with c3s
    3. Domain d5ntic_: 5nti C: [335757]
      automated match to d3l0la_
      complexed with c3s
    4. Domain d5ntid_: 5nti D: [335696]
      automated match to d3l0la_
      complexed with c3s
  45. Domain(s) for 5ntk:
    1. Domain d5ntka_: 5ntk A: [335759]
      automated match to d4wqpa_
      complexed with 99n
    2. Domain d5ntkb_: 5ntk B: [335841]
      automated match to d4wqpa_
      complexed with 99n
  46. Domain(s) for 5ntn:
    1. Domain d5ntna_: 5ntn A: [335737]
      automated match to d3l0la_
      complexed with 98h
    2. Domain d5ntnb_: 5ntn B: [335718]
      automated match to d3l0la_
      complexed with 98h
    3. Domain d5ntnc_: 5ntn C: [335846]
      automated match to d3l0la_
      complexed with 98h
    4. Domain d5ntnd_: 5ntn D: [335746]
      automated match to d3l0la_
      complexed with 98h
  47. Domain(s) for 5ntp:
  48. Domain(s) for 5ntq:
    1. Domain d5ntqa_: 5ntq A: [335716]
      automated match to d3l0la_
      complexed with 444
    2. Domain d5ntqb_: 5ntq B: [335796]
      automated match to d3l0la_
      complexed with 444
  49. Domain(s) for 5ntw:
    1. Domain d5ntwa_: 5ntw A: [335687]
      automated match to d3l0la_
      complexed with 98n
    2. Domain d5ntwb_: 5ntw B: [335692]
      automated match to d3l0la_
      complexed with 98n
    3. Domain d5ntwc_: 5ntw C: [335703]
      automated match to d3l0la_
      complexed with 98n
    4. Domain d5ntwd_: 5ntw D: [335726]
      automated match to d3l0la_
      complexed with 98n
  50. Domain(s) for 5nu1:
    1. Domain d5nu1a_: 5nu1 A: [335775]
      automated match to d3l0la_
      complexed with 8yb
    2. Domain d5nu1b_: 5nu1 B: [335743]
      automated match to d3l0la_
      complexed with 8yb
  51. Domain(s) for 5ufo:
  52. Domain(s) for 5ufr:
    1. Domain d5ufra_: 5ufr A: [332801]
      automated match to d3l0la_
      complexed with 88j
    2. Domain d5ufrb_: 5ufr B: [332793]
      automated match to d3l0la_
      complexed with 88j
  53. Domain(s) for 5vb3:
  54. Domain(s) for 5vb5:
  55. Domain(s) for 5vb6:
  56. Domain(s) for 5vb7:
  57. Domain(s) for 5vqk:
  58. Domain(s) for 5vql:
  59. Domain(s) for 5w4r:
    1. Domain d5w4ra_: 5w4r A: [348026]
      automated match to d5ufra_
      complexed with 9wd
    2. Domain d5w4rb_: 5w4r B: [347987]
      automated match to d5ufra_
      complexed with 9wd
  60. Domain(s) for 5w4v:
    1. Domain d5w4va_: 5w4v A: [347994]
      automated match to d5aygb_
      complexed with 9wa
    2. Domain d5w4vb_: 5w4v B: [348102]
      automated match to d5aygb_
      complexed with 9wa
    3. Domain d5w4vc_: 5w4v C: [348273]
      automated match to d5aygb_
      complexed with 9wa
    4. Domain d5w4vd_: 5w4v D: [348110]
      automated match to d5aygb_
      complexed with 9wa
    5. Domain d5w4ve_: 5w4v E: [347958]
      automated match to d5aygb_
      complexed with 9wa
    6. Domain d5w4vf_: 5w4v F: [347983]
      automated match to d5aygb_
      complexed with 9wa
  61. Domain(s) for 5x8q:
    1. Domain d5x8qa_: 5x8q A: [335273]
      automated match to d3l0la_
      complexed with 82r; mutant
    2. Domain d5x8qc_: 5x8q C: [335267]
      automated match to d3l0la_
      complexed with 82r; mutant
    3. Domain d5x8qe_: 5x8q E: [335308]
      automated match to d3l0la_
      complexed with 82r; mutant
    4. Domain d5x8qg_: 5x8q G: [335284]
      automated match to d3l0la_
      complexed with 82r; mutant
  62. Domain(s) for 5x8s:
    1. Domain d5x8sa_: 5x8s A: [335299]
      automated match to d3l0la_
      complexed with 6q5; mutant
    2. Domain d5x8sb_: 5x8s B: [335265]
      automated match to d3l0la_
      complexed with 6q5; mutant
  63. Domain(s) for 5x8u:
  64. Domain(s) for 5x8w:
  65. Domain(s) for 5x8x:
    1. Domain d5x8xa_: 5x8x A: [335246]
      automated match to d3l0la_
      complexed with 82o; mutant
    2. Domain d5x8xc_: 5x8x C: [335283]
      automated match to d3l0la_
      complexed with 82o; mutant
    3. Domain d5x8xe_: 5x8x E: [335291]
      automated match to d3l0la_
      complexed with 82o; mutant
    4. Domain d5x8xg_: 5x8x G: [335259]
      automated match to d3l0la_
      complexed with 82o; mutant
  66. Domain(s) for 5za1:
    1. Domain d5za1a_: 5za1 A: [359654]
      Other proteins in same PDB: d5za1b2
      automated match to d5x8sb_
      complexed with 9a0, dmf, edo
    2. Domain d5za1b1: 5za1 B:265-487 [359652]
      Other proteins in same PDB: d5za1b2
      automated match to d5x8sb_
      complexed with 9a0, dmf, edo
  67. Domain(s) for 6a22:
    1. Domain d6a22a_: 6a22 A: [361006]
      automated match to d3l0la_
      complexed with 9p6
    2. Domain d6a22c_: 6a22 C: [361110]
      automated match to d3l0la_
      complexed with 9p6
    3. Domain d6a22e_: 6a22 E: [361005]
      automated match to d3l0la_
      complexed with 9p6
    4. Domain d6a22g_: 6a22 G: [361040]
      automated match to d3l0la_
      complexed with 9p6
  68. Domain(s) for 6b30:
    1. Domain d6b30a_: 6b30 A: [349380]
      automated match to d5ufra_
      complexed with cfg
    2. Domain d6b30b_: 6b30 B: [349561]
      automated match to d5ufra_
      complexed with cfg
  69. Domain(s) for 6b31:
    1. Domain d6b31a_: 6b31 A: [355549]
      automated match to d4qm0a_
      complexed with cfj
    2. Domain d6b31b_: 6b31 B: [355430]
      automated match to d4qm0a_
      complexed with cfj
  70. Domain(s) for 6b33:
    1. Domain d6b33a_: 6b33 A: [360392]
      automated match to d4zjrb_
      complexed with cf7
    2. Domain d6b33b_: 6b33 B: [360355]
      automated match to d4zjrb_
      complexed with cf7
  71. Domain(s) for 6bn6:
    1. Domain d6bn6a_: 6bn6 A: [342991]
      Other proteins in same PDB: d6bn6b2
      automated match to d3l0la_
      complexed with so4, xgh
    2. Domain d6bn6b1: 6bn6 B:265-486 [342975]
      Other proteins in same PDB: d6bn6b2
      automated match to d3l0la_
      complexed with so4, xgh
  72. Domain(s) for 6br2:
    1. Domain d6br2a_: 6br2 A: [349811]
      automated match to d5ufra_
      complexed with e3s, mpd
    2. Domain d6br2b_: 6br2 B: [349773]
      automated match to d5ufra_
      complexed with e3s, mpd
  73. Domain(s) for 6br3:
    1. Domain d6br3a_: 6br3 A: [349946]
      automated match to d5ufra_
      complexed with e3v, mpd
    2. Domain d6br3b_: 6br3 B: [349855]
      automated match to d5ufra_
      complexed with e3v, mpd
  74. Domain(s) for 6cn5:
    1. Domain d6cn5a_: 6cn5 A: [356999]
      automated match to d3l0lb_
      complexed with f7m
    2. Domain d6cn5b_: 6cn5 B: [356995]
      automated match to d3l0lb_
      complexed with f7m
  75. Domain(s) for 6cn6:
  76. Domain(s) for 6e3e:
    1. Domain d6e3ea_: 6e3e A: [369849]
      automated match to d5ufra_
      complexed with hq7, mpd, so4
    2. Domain d6e3eb_: 6e3e B: [369774]
      automated match to d5ufra_
      complexed with hq7, mpd, so4
  77. Domain(s) for 6e3g:
    1. Domain d6e3ga_: 6e3g A: [369839]
      automated match to d3l0la_
      complexed with edo, hoj
    2. Domain d6e3gb_: 6e3g B: [369785]
      automated match to d3l0la_
      complexed with edo, hoj
  78. Domain(s) for 6esn:
  79. Domain(s) for 6eu9:
    1. Domain d6eu9a_: 6eu9 A: [350364]
      automated match to d4dm6b_
      complexed with rea
    2. Domain d6eu9b_: 6eu9 B: [350356]
      automated match to d4dm6b_
      complexed with rea
    3. Domain d6eu9c_: 6eu9 C: [350486]
      automated match to d4dm6b_
      complexed with rea
    4. Domain d6eu9d_: 6eu9 D: [350397]
      automated match to d4dm6b_
      complexed with rea
  80. Domain(s) for 6fgq:
    1. Domain d6fgqa1: 6fgq A:265-493 [356660]
      Other proteins in same PDB: d6fgqa2
      automated match to d3l0la_
      complexed with d9n
    2. Domain d6fgqb_: 6fgq B: [356504]
      Other proteins in same PDB: d6fgqa2
      automated match to d3l0la_
      complexed with d9n
  81. Domain(s) for 6fzu:
    1. Domain d6fzua_: 6fzu A: [354965]
      automated match to d3l0la_
      complexed with ee8
    2. Domain d6fzub_: 6fzu B: [354973]
      automated match to d3l0la_
      complexed with ee8
  82. Domain(s) for 6g05:
    1. Domain d6g05a_: 6g05 A: [354945]
      automated match to d3l0la_
      complexed with ef5
    2. Domain d6g05b_: 6g05 B: [354949]
      automated match to d3l0la_
      complexed with ef5
  83. Domain(s) for 6g07:
    1. Domain d6g07a_: 6g07 A: [354956]
      automated match to d3l0la_
      complexed with eez
    2. Domain d6g07b_: 6g07 B: [354943]
      automated match to d3l0la_
      complexed with eez
    3. Domain d6g07c_: 6g07 C: [354966]
      automated match to d3l0la_
      complexed with eez
    4. Domain d6g07d_: 6g07 D: [354922]
      automated match to d3l0la_
      complexed with eez
  84. Domain(s) for 6ivx:
    1. Domain d6ivxa_: 6ivx A: [365642]
      automated match to d3l0la_
      complexed with ayo
    2. Domain d6ivxc_: 6ivx C: [365625]
      automated match to d3l0la_
      complexed with ayo
    3. Domain d6ivxe_: 6ivx E: [365633]
      automated match to d3l0la_
      complexed with ayo
    4. Domain d6ivxg_: 6ivx G: [365623]
      automated match to d3l0la_
      complexed with ayo
  85. Domain(s) for 6j1l:
    1. Domain d6j1la_: 6j1l A: [368420]
      automated match to d3l0la_
      complexed with b6l
    2. Domain d6j1lb_: 6j1l B: [368423]
      automated match to d3l0la_
      complexed with b6l
    3. Domain d6j1lc_: 6j1l C: [368419]
      automated match to d3l0la_
      complexed with b6l
  86. Domain(s) for 6nad:
    1. Domain d6nada_: 6nad A: [368637]
      automated match to d5x8ua_
      complexed with khy
    2. Domain d6nadb_: 6nad B: [368622]
      automated match to d5x8ua_
      complexed with khy
  87. Domain(s) for 6nws:
  88. Domain(s) for 6nwt:
    1. Domain d6nwta_: 6nwt A: [370959]
      Other proteins in same PDB: d6nwtc2
      automated match to d5x8ua_
      complexed with l7p
    2. Domain d6nwtc1: 6nwt C:265-507 [370909]
      Other proteins in same PDB: d6nwtc2
      automated match to d5x8ua_
      complexed with l7p
  89. Domain(s) for 6o3z:
  90. Domain(s) for 6o98:
    1. Domain d6o98a_: 6o98 A: [366695]
      Other proteins in same PDB: d6o98b2
      automated match to d5ntwa_
      complexed with l8a
    2. Domain d6o98b1: 6o98 B:244-465 [366633]
      Other proteins in same PDB: d6o98b2
      automated match to d5ntwa_
      complexed with l8a
  91. Domain(s) for 6q2w:
    1. Domain d6q2wa_: 6q2w A: [369452]
      automated match to d5x8sb_
      complexed with hbw
    2. Domain d6q2wb_: 6q2w B: [369441]
      automated match to d5x8sb_
      complexed with hbw
  92. Domain(s) for 6q6m:
  93. Domain(s) for 6q6o:
  94. Domain(s) for 6q7a:
  95. Domain(s) for 6q7h:
  96. Domain(s) for 6r7a:
  97. Domain(s) for 6r7j:
  98. Domain(s) for 6r7k:
  99. Domain(s) for 6sal:
  100. Domain(s) for 6slz:
    1. Domain d6slza_: 6slz A: [391545]
      automated match to d5x8ua_
      complexed with lk8
    2. Domain d6slzb_: 6slz B: [391570]
      automated match to d5x8ua_
      complexed with lk8
  101. Domain(s) for 6t4g:
  102. Domain(s) for 6t4i:
  103. Domain(s) for 6t4j:
  104. Domain(s) for 6t4k:
  105. Domain(s) for 6t4t:
  106. Domain(s) for 6t4u:
  107. Domain(s) for 6t4w:
  108. Domain(s) for 6t4x:
  109. Domain(s) for 6t4y:
  110. Domain(s) for 6t50:
  111. Domain(s) for 6tlm:
  112. Domain(s) for 6tlq:
  113. Domain(s) for 6tlt:
  114. Domain(s) for 6ucg:
  115. Domain(s) for 6xfv:
    1. Domain d6xfva_: 6xfv A: [393292]
      automated match to d5ntwa_
      complexed with v27
    2. Domain d6xfvb_: 6xfv B: [393303]
      automated match to d5ntwa_
      complexed with v27
  116. Domain(s) for 7jh2:
  117. Domain(s) for 7jtw:
  118. Domain(s) for 7nec:
  119. Domain(s) for 7np5:
  120. Domain(s) for 7np6:
  121. Domain(s) for 7npc:

More info for Species Human (Homo sapiens) [TaxId:9606] from a.123.1.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.123.1.0 automated matches: