Lineage for Species: Escherichia coli K-12 [TaxId: 83333]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2049048Fold b.38: Sm-like fold [50181] (5 superfamilies)
    core: barrel, open; n*=4, S*=8; meander; SH3-like topology
  4. 2049049Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families) (S)
  5. 2049341Family b.38.1.2: Pleiotropic translational regulator Hfq [74939] (2 protein domains)
    forms homohexameric ring structures
  6. 2049457Protein automated matches [190062] (8 species)
    not a true protein
  7. 2049458Species Escherichia coli K-12 [TaxId:83333] [189116] (6 PDB entries)

PDB entries in Species: Escherichia coli K-12 [TaxId: 83333]:

  1. Domain(s) for 3gib:
    1. 2049466Domain d3giba_: 3gib A: [176667]
      automated match to d1hk9d_
      protein/DNA complex; protein/RNA complex; complexed with nhe
    2. 2049467Domain d3gibb_: 3gib B: [176668]
      automated match to d1hk9d_
      protein/DNA complex; protein/RNA complex; complexed with nhe
    3. 2049468Domain d3gibc_: 3gib C: [176669]
      automated match to d1hk9d_
      protein/DNA complex; protein/RNA complex; complexed with nhe
  2. Domain(s) for 3qhs:
    1. 2049469Domain d3qhsa_: 3qhs A: [248886]
      automated match to d3inzf_
    2. 2049470Domain d3qhsb_: 3qhs B: [248887]
      automated match to d3inzf_
    3. 2049471Domain d3qhsc_: 3qhs C: [248888]
      automated match to d3inzf_
    4. 2049472Domain d3qhsd_: 3qhs D: [248889]
      automated match to d3inzf_
    5. 2049473Domain d3qhse_: 3qhs E: [248890]
      automated match to d3inzf_
    6. 2049474Domain d3qhsf_: 3qhs F: [248891]
      automated match to d3inzf_
    7. 2049475Domain d3qhsg_: 3qhs G: [248892]
      automated match to d3inzf_
    8. 2049476Domain d3qhsh_: 3qhs H: [248893]
      automated match to d3inzf_
    9. 2049477Domain d3qhsi_: 3qhs I: [248894]
      automated match to d3inzf_
    10. 2049478Domain d3qhsj_: 3qhs J: [248895]
      automated match to d3inzf_
    11. 2049479Domain d3qhsk_: 3qhs K: [248896]
      automated match to d3inzf_
    12. 2049480Domain d3qhsl_: 3qhs L: [248897]
      automated match to d3inzf_
  3. Domain(s) for 3vu3:
    1. 2049487Domain d3vu3c_: 3vu3 C: [239892]
      Other proteins in same PDB: d3vu3a1, d3vu3a2
      automated match to d3inzf_
      protein/RNA complex; complexed with hem
    2. 2049488Domain d3vu3d_: 3vu3 D: [239893]
      Other proteins in same PDB: d3vu3a1, d3vu3a2
      automated match to d3inzf_
      protein/RNA complex; complexed with hem
    3. 2049489Domain d3vu3e_: 3vu3 E: [239894]
      Other proteins in same PDB: d3vu3a1, d3vu3a2
      automated match to d3inzf_
      protein/RNA complex; complexed with hem
    4. 2049490Domain d3vu3f_: 3vu3 F: [239895]
      Other proteins in same PDB: d3vu3a1, d3vu3a2
      automated match to d3inzf_
      protein/RNA complex; complexed with hem
    5. 2049491Domain d3vu3g_: 3vu3 G: [239896]
      Other proteins in same PDB: d3vu3a1, d3vu3a2
      automated match to d3inzf_
      protein/RNA complex; complexed with hem
    6. 2049492Domain d3vu3h_: 3vu3 H: [239897]
      Other proteins in same PDB: d3vu3a1, d3vu3a2
      automated match to d3inzf_
      protein/RNA complex; complexed with hem
  4. Domain(s) for 4jri:
    1. 2049462Domain d4jria_: 4jri A: [229637]
      automated match to d3quic_
      mutant
    2. 2049463Domain d4jrib_: 4jri B: [235035]
      automated match to d4jrid_
      mutant
    3. 2049464Domain d4jric_: 4jri C: [235036]
      automated match to d4jrid_
      mutant
    4. 2049465Domain d4jrid_: 4jri D: [229638]
      automated match to d3quic_
      mutant
  5. Domain(s) for 4jrk:
    1. 2049459Domain d4jrka_: 4jrk A: [229633]
      automated match to d3quic_
      mutant
    2. 2049460Domain d4jrkb_: 4jrk B: [229632]
      automated match to d3quic_
      mutant
    3. 2049461Domain d4jrkc_: 4jrk C: [229635]
      automated match to d3quic_
      mutant
  6. Domain(s) for 4juv:
    1. 2049481Domain d4juva_: 4juv A: [235045]
      automated match to d4juvb_
      mutant
    2. 2049482Domain d4juvb_: 4juv B: [229634]
      automated match to d3quic_
      mutant
    3. 2049483Domain d4juvc_: 4juv C: [229636]
      automated match to d3quic_
      mutant
    4. 2049484Domain d4juvd_: 4juv D: [235047]
      automated match to d4juvb_
      mutant
    5. 2049485Domain d4juve_: 4juv E: [235046]
      automated match to d4juvb_
      mutant
    6. 2049486Domain d4juvf_: 4juv F: [235048]
      automated match to d4juvb_
      mutant

More info for Species Escherichia coli K-12 [TaxId:83333] from b.38.1.2 automated matches

Timeline for Species Escherichia coli K-12 [TaxId:83333] from b.38.1.2 automated matches: