Lineage for Species: Hypericum perforatum [TaxId: 65561]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538746Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 2539012Superfamily d.129.3: Bet v1-like [55961] (11 families) (S)
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
  5. 2539333Family d.129.3.0: automated matches [191339] (1 protein)
    not a true family
  6. 2539334Protein automated matches [190218] (22 species)
    not a true protein
  7. 2539447Species Hypericum perforatum [TaxId:65561] [189103] (3 PDB entries)

PDB entries in Species: Hypericum perforatum [TaxId: 65561]:

  1. Domain(s) for 3ie5:
    1. 2539448Domain d3ie5a1: 3ie5 A:1-159 [178262]
      Other proteins in same PDB: d3ie5a2, d3ie5b2
      automated match to d1e09a_
      complexed with 1pe, cl, pe8, peg, pg4, pge
    2. 2539449Domain d3ie5b1: 3ie5 B:1-159 [178263]
      Other proteins in same PDB: d3ie5a2, d3ie5b2
      automated match to d1e09a_
      complexed with 1pe, cl, pe8, peg, pg4, pge
  2. Domain(s) for 4n3e:
    1. 2539450Domain d4n3ea_: 4n3e A: [341611]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    2. 2539451Domain d4n3eb_: 4n3e B: [341562]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    3. 2539452Domain d4n3ec_: 4n3e C: [341557]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    4. 2539453Domain d4n3ed_: 4n3e D: [341709]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    5. 2539454Domain d4n3ee_: 4n3e E: [341662]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    6. 2539455Domain d4n3ef_: 4n3e F: [341643]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    7. 2539456Domain d4n3eg_: 4n3e G: [341549]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    8. 2539457Domain d4n3eh_: 4n3e H: [341552]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    9. 2539458Domain d4n3ei_: 4n3e I: [341738]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    10. 2539459Domain d4n3ej_: 4n3e J: [341542]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    11. 2539460Domain d4n3ek_: 4n3e K: [341617]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    12. 2539461Domain d4n3el_: 4n3e L: [341603]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    13. 2539462Domain d4n3em_: 4n3e M: [341748]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    14. 2539463Domain d4n3en_: 4n3e N: [341642]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    15. 2539464Domain d4n3eo_: 4n3e O: [341622]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    16. 2539465Domain d4n3ep_: 4n3e P: [341757]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    17. 2539466Domain d4n3eq_: 4n3e Q: [341555]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    18. 2539467Domain d4n3er_: 4n3e R: [341544]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    19. 2539468Domain d4n3es_: 4n3e S: [341537]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    20. 2539469Domain d4n3et_: 4n3e T: [341543]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    21. 2539470Domain d4n3eu_: 4n3e U: [341604]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    22. 2539471Domain d4n3ev_: 4n3e V: [341541]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    23. 2539472Domain d4n3ew_: 4n3e W: [341658]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    24. 2539473Domain d4n3ex_: 4n3e X: [341539]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    25. 2539474Domain d4n3ey_: 4n3e Y: [341553]
      automated match to d1e09a_
      complexed with 2an, epe, so4
    26. 2539475Domain d4n3ez_: 4n3e Z: [341756]
      automated match to d1e09a_
      complexed with 2an, epe, so4
  3. Domain(s) for 6sjj:
    1. 3088116Domain d6sjjc1: 6sjj C:1-159 [388178]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    2. 3088125Domain d6sjjh1: 6sjj H:1-159 [388187]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    3. 3088127Domain d6sjjj1: 6sjj J:1-159 [388189]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    4. 3088130Domain d6sjjo1: 6sjj O:1-159 [388192]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    5. 3088141Domain d6sjjr1: 6sjj R:1-159 [388203]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    6. 3088150Domain d6sjjg1: 6sjj g:1-159 [388212]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    7. 3088159Domain d6sjjx_: 6sjj X: [388221]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    8. 3088164Domain d6sjjf_: 6sjj F: [388226]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    9. 3088168Domain d6sjji1: 6sjj i:1-159 [388230]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    10. 3088171Domain d6sjjm1: 6sjj M:1-159 [388233]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    11. 3088174Domain d6sjjp_: 6sjj P: [388236]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    12. 3088182Domain d6sjjd_: 6sjj D: [388244]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    13. 3088196Domain d6sjja_: 6sjj a: [388258]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    14. 3088197Domain d6sjjb_: 6sjj B: [388259]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    15. 3088202Domain d6sjjn1: 6sjj N:1-159 [388264]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    16. 3088204Domain d6sjjs1: 6sjj S:1-159 [388266]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    17. 3088207Domain d6sjjy_: 6sjj Y: [388269]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    18. 3088229Domain d6sjje1: 6sjj E:1-159 [388291]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    19. 3088242Domain d6sjjk1: 6sjj K:1-159 [388304]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    20. 3088244Domain d6sjjt1: 6sjj T:1-159 [388306]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    21. 3088308Domain d6sjjq1: 6sjj Q:1-159 [388370]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    22. 3088309Domain d6sjjl1: 6sjj L:1-159 [388371]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    23. 3088319Domain d6sjjz_: 6sjj Z: [388381]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    24. 3088329Domain d6sjju_: 6sjj U: [388391]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    25. 3088346Domain d6sjjv_: 6sjj V: [388408]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4
    26. 3088371Domain d6sjjw_: 6sjj W: [388433]
      Other proteins in same PDB: d6sjjc2, d6sjje2, d6sjjg2, d6sjjh2, d6sjji2, d6sjjj2, d6sjjk2, d6sjjl2, d6sjjm2, d6sjjn2, d6sjjo2, d6sjjq2, d6sjjr2, d6sjjs2, d6sjjt2
      automated match to d5mmua_
      complexed with 2an, dms, epe, flc, so4

More info for Species Hypericum perforatum [TaxId:65561] from d.129.3.0 automated matches

Timeline for Species Hypericum perforatum [TaxId:65561] from d.129.3.0 automated matches: