Lineage for Species: Clostridium difficile [TaxId: 272563]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2834402Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2835965Family c.1.10.0: automated matches [191319] (1 protein)
    not a true family
  6. 2835966Protein automated matches [190115] (94 species)
    not a true protein
  7. 2836219Species Clostridium difficile [TaxId:272563] [189051] (2 PDB entries)

PDB entries in Species: Clostridium difficile [TaxId: 272563]:

  1. Domain(s) for 3js3:
    1. 2836224Domain d3js3a_: 3js3 A: [178750]
      automated match to d1gqna_
      complexed with dhs
    2. 2836225Domain d3js3b_: 3js3 B: [178751]
      automated match to d1gqna_
      complexed with dhs
    3. 2836226Domain d3js3c_: 3js3 C: [178752]
      automated match to d1gqna_
      complexed with dhs
    4. 2836227Domain d3js3d_: 3js3 D: [178753]
      automated match to d1gqna_
      complexed with dhs
  2. Domain(s) for 4h3d:
    1. 2836220Domain d4h3da_: 4h3d A: [202352]
      Other proteins in same PDB: d4h3dd2
      automated match to d4h3dd_
      complexed with act, peg, pge, shl
    2. 2836221Domain d4h3db_: 4h3d B: [202353]
      Other proteins in same PDB: d4h3dd2
      automated match to d4h3dd_
      complexed with act, peg, pge, shl
    3. 2836222Domain d4h3dc_: 4h3d C: [202354]
      Other proteins in same PDB: d4h3dd2
      automated match to d4h3dd_
      complexed with act, peg, pge, shl
    4. 2836223Domain d4h3dd1: 4h3d D:1-254 [193493]
      Other proteins in same PDB: d4h3dd2
      automated match to d3js3a_
      complexed with act, peg, pge, shl

More info for Species Clostridium difficile [TaxId:272563] from c.1.10.0 automated matches

Timeline for Species Clostridium difficile [TaxId:272563] from c.1.10.0 automated matches: