Lineage for Species: Escherichia coli K-12 [TaxId: 83333]

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. Family b.82.2.10: AlkB-like [141628] (3 proteins)
    automatically mapped to Pfam PF13532
  6. Protein automated matches [191077] (2 species)
    not a true protein
  7. Species Escherichia coli K-12 [TaxId:83333] [189001] (20 PDB entries)

PDB entries in Species: Escherichia coli K-12 [TaxId: 83333]:

  1. Domain(s) for 3i2o:
  2. Domain(s) for 3i3m:
  3. Domain(s) for 3i3q:
    1. Domain d3i3qa_: 3i3q A: [178063]
      automated match to d2fd8a1
      protein/DNA complex; complexed with akg, mn
    2. Domain d3i3qb_: 3i3q B: [178064]
      automated match to d2fd8a1
      protein/DNA complex; complexed with akg, mn
  4. Domain(s) for 3i49:
  5. Domain(s) for 3khb:
    1. Domain d3khba_: 3khb A: [179368]
      automated match to d2fd8a1
      complexed with akg, co
    2. Domain d3khbb_: 3khb B: [179369]
      automated match to d2fd8a1
      complexed with akg, co
  6. Domain(s) for 3khc:
    1. Domain d3khca_: 3khc A: [179370]
      automated match to d2fd8a1
      protein/DNA complex; complexed with akg, co
    2. Domain d3khcb_: 3khc B: [179371]
      automated match to d2fd8a1
      protein/DNA complex; complexed with akg, co
  7. Domain(s) for 3o1m:
  8. Domain(s) for 3o1o:
  9. Domain(s) for 3o1p:
  10. Domain(s) for 3o1r:
  11. Domain(s) for 3o1s:
  12. Domain(s) for 3o1t:
  13. Domain(s) for 3o1u:
  14. Domain(s) for 3o1v:
  15. Domain(s) for 3t3y:
  16. Domain(s) for 3t4h:
  17. Domain(s) for 3t4v:
  18. Domain(s) for 4jht:
  19. Domain(s) for 6y0q:
  20. Domain(s) for 6ypv:

More info for Species Escherichia coli K-12 [TaxId:83333] from b.82.2.10 automated matches

Timeline for Species Escherichia coli K-12 [TaxId:83333] from b.82.2.10 automated matches: