SCOPe 2.05: Species: Escherichia coli K-12 [TaxId: 83333]

Lineage for Species: Escherichia coli K-12 [TaxId: 83333]

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

Superfamily d.79.5: IpsF-like [69765] (2 families)

forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)

Family d.79.5.1: IpsF-like [69766] (3 proteins)
automatically mapped to Pfam PF02542
Protein 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF [69767] (6 species)
Species Escherichia coli K-12 [TaxId:83333] [188969] (5 PDB entries)

PDB entries in Species: Escherichia coli K-12 [TaxId: 83333]:

Domain(s) for 3elc:
1. Domain d3elca_: 3elc A: [175052]
  automated match to d1h48c_
  complexed with f01, gpp, zn
2. Domain d3elcb_: 3elc B: [175053]
  automated match to d1h48c_
  complexed with f01, gpp, zn
3. Domain d3elcc_: 3elc C: [175054]
  automated match to d1h48c_
  complexed with f01, gpp, zn
Domain(s) for 3eor:
- Domain d3eora_: 3eor A: [175139]
  automated match to d1h48c_
  complexed with cfv, gpp, na, zn
Domain(s) for 3ern:
1. Domain d3erna_: 3ern A: [175168]
  automated match to d1h48c_
  complexed with car, gpp, so4, zn
2. Domain d3ernb_: 3ern B: [175169]
  automated match to d1h48c_
  complexed with car, gpp, so4, zn
3. Domain d3ernc_: 3ern C: [175170]
  automated match to d1h48c_
  complexed with car, gpp, so4, zn
4. Domain d3ernd_: 3ern D: [175171]
  automated match to d1h48c_
  complexed with car, gpp, so4, zn
5. Domain d3erne_: 3ern E: [175172]
  automated match to d1h48c_
  complexed with car, gpp, so4, zn
6. Domain d3ernf_: 3ern F: [175173]
  automated match to d1h48c_
  complexed with car, gpp, so4, zn
Domain(s) for 3esj:
- Domain d3esja_: 3esj A: [175193]
  automated match to d1h48c_
  complexed with cc7, gpp, mg, zn
Domain(s) for 3fba:
- Domain d3fbaa_: 3fba A: [246075]
  automated match to d3esja_
  complexed with c6b, gol, gpp, zn

More info for Species Escherichia coli K-12 [TaxId:83333] from d.79.5.1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF

Timeline for Species Escherichia coli K-12 [TaxId:83333] from d.79.5.1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF:

Species Escherichia coli K-12 [TaxId:83333] from d.79.5.1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF first appeared in SCOPe 2.01
Species Escherichia coli K-12 [TaxId:83333] from d.79.5.1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF appears in SCOPe 2.04
Species Escherichia coli K-12 [TaxId:83333] from d.79.5.1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF appears in SCOPe 2.06
Species Escherichia coli K-12 [TaxId:83333] from d.79.5.1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF appears in the current release, SCOPe 2.08