Lineage for Species: Hiv-1 m:b_arv2/sf2 [TaxId: 11685]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2058814Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2058815Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2058816Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 protein domains)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 2060049Protein automated matches [190433] (11 species)
    not a true protein
  7. 2060057Species Hiv-1 m:b_arv2/sf2 [TaxId:11685] [188968] (6 PDB entries)

PDB entries in Species: Hiv-1 m:b_arv2/sf2 [TaxId: 11685]:

  1. Domain(s) for 3ekq:
    1. 2060070Domain d3ekqa_: 3ekq A: [175025]
      automated match to d1k6ca_
      complexed with po4, roc
    2. 2060071Domain d3ekqb_: 3ekq B: [175026]
      automated match to d1k6ca_
      complexed with po4, roc
  2. Domain(s) for 3el4:
    1. 2060060Domain d3el4a_: 3el4 A: [175045]
      automated match to d1k6ca_
      complexed with act, roc
    2. 2060061Domain d3el4b_: 3el4 B: [175046]
      automated match to d1k6ca_
      complexed with act, roc
  3. Domain(s) for 3el9:
    1. 2060058Domain d3el9a_: 3el9 A: [175049]
      automated match to d1k6ca_
      complexed with act, dr7, po4
    2. 2060059Domain d3el9b_: 3el9 B: [175050]
      automated match to d1k6ca_
      complexed with act, dr7, po4
  4. Domain(s) for 3em3:
    1. 2060068Domain d3em3a_: 3em3 A: [175073]
      automated match to d1kzka_
      complexed with 478, act
    2. 2060069Domain d3em3b_: 3em3 B: [175074]
      automated match to d1kzka_
      complexed with 478, act
  5. Domain(s) for 3em4:
    1. 2060064Domain d3em4a_: 3em4 A: [175075]
      automated match to d1kzka_
      complexed with dr7, po4
    2. 2060065Domain d3em4b_: 3em4 B: [175076]
      automated match to d1kzka_
      complexed with dr7, po4
    3. 2060066Domain d3em4u_: 3em4 U: [175077]
      automated match to d1kzka_
      complexed with dr7, po4
    4. 2060067Domain d3em4v_: 3em4 V: [175078]
      automated match to d1kzka_
      complexed with dr7, po4
  6. Domain(s) for 3em6:
    1. 2060062Domain d3em6a_: 3em6 A: [175083]
      automated match to d1kzka_
      complexed with 017, act, po4; mutant
    2. 2060063Domain d3em6b_: 3em6 B: [175084]
      automated match to d1kzka_
      complexed with 017, act, po4; mutant

More info for Species Hiv-1 m:b_arv2/sf2 [TaxId:11685] from b.50.1.1 automated matches

Timeline for Species Hiv-1 m:b_arv2/sf2 [TaxId:11685] from b.50.1.1 automated matches: