Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150370Fold c.117: Amidase signature (AS) enzymes [75303] (1 superfamily)
    possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest
  4. 2150371Superfamily c.117.1: Amidase signature (AS) enzymes [75304] (1 family) (S)
    automatically mapped to Pfam PF01425
  5. 2150372Family c.117.1.1: Amidase signature (AS) enzymes [75305] (5 protein domains)
  6. 2150439Protein automated matches [191046] (2 species)
    not a true protein
  7. 2150440Species Norway rat (Rattus norvegicus) [TaxId:10116] [188885] (19 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 2vya:
    1. 2150469Domain d2vyaa_: 2vya A: [243955]
      automated match to d3oj8b_
      complexed with cl, pf7, unx
    2. 2150470Domain d2vyab_: 2vya B: [243956]
      automated match to d3oj8b_
      complexed with cl, pf7, unx
  2. Domain(s) for 2wap:
    1. 2150471Domain d2wapa_: 2wap A: [169162]
      automated match to d1mt5a_
      complexed with cl, na, pix
    2. 2150472Domain d2wapb_: 2wap B: [169163]
      automated match to d1mt5a_
      complexed with cl, na, pix
  3. Domain(s) for 2wj1:
    1. 2150447Domain d2wj1a_: 2wj1 A: [206842]
      automated match to d2wapb_
      complexed with cl, s99
    2. 2150448Domain d2wj1b_: 2wj1 B: [206843]
      automated match to d2wapb_
      complexed with cl, s99
  4. Domain(s) for 2wj2:
    1. 2150465Domain d2wj2a_: 2wj2 A: [206844]
      automated match to d2wapb_
      complexed with cl, ol1
    2. 2150466Domain d2wj2b_: 2wj2 B: [206845]
      automated match to d2wapb_
      complexed with cl, ol1
  5. Domain(s) for 3k7f:
    1. 2150443Domain d3k7fa_: 3k7f A: [212194]
      automated match to d2wapb_
      complexed with cl, f2c, na
    2. 2150444Domain d3k7fb_: 3k7f B: [212195]
      automated match to d2wapb_
      complexed with cl, f2c, na
  6. Domain(s) for 3k83:
    1. 2150451Domain d3k83a_: 3k83 A: [212197]
      automated match to d2wapb_
      complexed with 1do, cl, f27
    2. 2150452Domain d3k83b_: 3k83 B: [212198]
      automated match to d2wapb_
      complexed with 1do, cl, f27
  7. Domain(s) for 3k84:
    1. 2150455Domain d3k84a_: 3k84 A: [212199]
      automated match to d2wapb_
      complexed with cl, k84
    2. 2150456Domain d3k84b_: 3k84 B: [212200]
      automated match to d2wapb_
      complexed with cl, k84
  8. Domain(s) for 3lj6:
    1. 2150467Domain d3lj6a_: 3lj6 A: [212909]
      automated match to d2wapb_
      complexed with cl, pix
    2. 2150468Domain d3lj6b_: 3lj6 B: [212910]
      automated match to d2wapb_
      complexed with cl, pix
  9. Domain(s) for 3lj7:
    1. 2150457Domain d3lj7a_: 3lj7 A: [212911]
      automated match to d2wapb_
      complexed with cl, oho
    2. 2150458Domain d3lj7b_: 3lj7 B: [212912]
      automated match to d2wapb_
      complexed with cl, oho
  10. Domain(s) for 3oj8:
    1. 2150445Domain d3oj8a_: 3oj8 A: [214350]
      automated match to d2wapb_
      complexed with cl, oj8
    2. 2150446Domain d3oj8b_: 3oj8 B: [214351]
      automated match to d2wapb_
      complexed with cl, oj8
  11. Domain(s) for 3ppm:
    1. 2150441Domain d3ppma_: 3ppm A: [214897]
      automated match to d2wapb_
      complexed with 1do, cl, f, jg1, peg
    2. 2150442Domain d3ppmb_: 3ppm B: [214898]
      automated match to d2wapb_
      complexed with 1do, cl, f, jg1, peg
  12. Domain(s) for 3pr0:
    1. 2150449Domain d3pr0a_: 3pr0 A: [214933]
      automated match to d2wapb_
      complexed with cl, jg2, peg
    2. 2150450Domain d3pr0b_: 3pr0 B: [214934]
      automated match to d2wapb_
      complexed with cl, jg2, peg
  13. Domain(s) for 3qj8:
    1. 2150473Domain d3qj8a1: 3qj8 A:32-577 [248908]
      Other proteins in same PDB: d3qj8a2
      automated match to d3oj8b_
    2. 2150474Domain d3qj8b_: 3qj8 B: [248909]
      Other proteins in same PDB: d3qj8a2
      automated match to d3oj8b_
  14. Domain(s) for 3qj9:
    1. 2150461Domain d3qj9a1: 3qj9 A:32-577 [248910]
      Other proteins in same PDB: d3qj9a2
      automated match to d3oj8b_
      complexed with edo, gol, pge, qj9
    2. 2150462Domain d3qj9b_: 3qj9 B: [248911]
      Other proteins in same PDB: d3qj9a2
      automated match to d3oj8b_
      complexed with edo, gol, pge, qj9
  15. Domain(s) for 3qk5:
    1. 2150459Domain d3qk5a1: 3qk5 A:32-577 [248922]
      Other proteins in same PDB: d3qk5a2
      automated match to d3oj8b_
      complexed with edo, gol, qk5
    2. 2150460Domain d3qk5b_: 3qk5 B: [248923]
      Other proteins in same PDB: d3qk5a2
      automated match to d3oj8b_
      complexed with edo, gol, qk5
  16. Domain(s) for 3qkv:
    1. 2150477Domain d3qkva1: 3qkv A:32-577 [248926]
      Other proteins in same PDB: d3qkva2
      automated match to d3oj8b_
      complexed with qkv
    2. 2150478Domain d3qkvb_: 3qkv B: [248927]
      Other proteins in same PDB: d3qkva2
      automated match to d3oj8b_
      complexed with qkv
  17. Domain(s) for 4do3:
    1. 2150453Domain d4do3a_: 4do3 A: [219882]
      automated match to d2wapb_
      complexed with 0la, cl, oho
    2. 2150454Domain d4do3b_: 4do3 B: [219883]
      automated match to d2wapb_
      complexed with 0la, cl, oho
  18. Domain(s) for 4hbp:
    1. 2150475Domain d4hbpa_: 4hbp A: [202412]
      automated match to d4hbpb_
      complexed with 17j
    2. 2150476Domain d4hbpb_: 4hbp B: [194027]
      automated match to d2wapb_
      complexed with 17j
  19. Domain(s) for 4j5p:
    1. 2150463Domain d4j5pa_: 4j5p A: [223557]
      automated match to d2wapb_
      complexed with br1, cl, peg
    2. 2150464Domain d4j5pb_: 4j5p B: [223558]
      automated match to d2wapb_
      complexed with br1, cl, peg

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from c.117.1.1 automated matches

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from c.117.1.1 automated matches: