Lineage for Species: Pseudomonas mendocina [TaxId: 300]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2160960Superfamily d.15.12: TmoB-like [110814] (2 families) (S)
    possibly related to the ubiquitin-like and/or 2Fe-2S ferredoxin-like superfamilies
  5. 2160982Family d.15.12.0: automated matches [191572] (1 protein)
    not a true family
  6. 2160983Protein automated matches [190991] (1 species)
    not a true protein
  7. 2160984Species Pseudomonas mendocina [TaxId:300] [188696] (20 PDB entries)

PDB entries in Species: Pseudomonas mendocina [TaxId: 300]:

  1. Domain(s) for 3dhg:
    1. 2160991Domain d3dhgc_: 3dhg C: [173941]
      Other proteins in same PDB: d3dhga_, d3dhgd_
      automated match to d1t0rc_
      complexed with azi, ca, fe
    2. 2160992Domain d3dhgf_: 3dhg F: [173943]
      Other proteins in same PDB: d3dhga_, d3dhgd_
      automated match to d1t0rc_
      complexed with azi, ca, fe
  2. Domain(s) for 3dhh:
  3. Domain(s) for 3dhi:
  4. Domain(s) for 3ge3:
  5. Domain(s) for 3ge8:
    1. 2161001Domain d3ge8c_: 3ge8 C: [176571]
      Other proteins in same PDB: d3ge8a_, d3ge8d_, d3ge8e_, d3ge8h_
      automated match to d1t0rc_
      complexed with act, fe
    2. 2161002Domain d3ge8g_: 3ge8 G: [176574]
      Other proteins in same PDB: d3ge8a_, d3ge8d_, d3ge8e_, d3ge8h_
      automated match to d1t0rc_
      complexed with act, fe
  6. Domain(s) for 3i5j:
  7. Domain(s) for 3i63:
  8. Domain(s) for 3q14:
  9. Domain(s) for 3q2a:
  10. Domain(s) for 3q3m:
    1. 2160985Domain d3q3mc_: 3q3m C: [184187]
      Other proteins in same PDB: d3q3ma_, d3q3md_, d3q3me_, d3q3mh_
      automated match to d1t0rc_
      complexed with fe, z82
    2. 2160986Domain d3q3mg_: 3q3m G: [184190]
      Other proteins in same PDB: d3q3ma_, d3q3md_, d3q3me_, d3q3mh_
      automated match to d1t0rc_
      complexed with fe, z82
  11. Domain(s) for 3q3n:
  12. Domain(s) for 3q3o:
  13. Domain(s) for 3ri7:
  14. Domain(s) for 3rmk:
    1. 2160993Domain d3rmkc_: 3rmk C: [196048]
      Other proteins in same PDB: d3rmka_, d3rmkd_
      automated match to d3ge3c_
      complexed with bml, ca, fe, pge
    2. 2160994Domain d3rmkf_: 3rmk F: [200500]
      Other proteins in same PDB: d3rmka_, d3rmkd_
      automated match to d3rmkc_
      complexed with bml, ca, fe, pge
  15. Domain(s) for 4p1b:
    1. 2161003Domain d4p1bc_: 4p1b C: [263409]
      Other proteins in same PDB: d4p1ba_, d4p1bd_, d4p1bh_, d4p1bi_
      automated match to d3ge3c_
      complexed with act, fe, fes, na, peg
    2. 2161004Domain d4p1bf_: 4p1b F: [263411]
      Other proteins in same PDB: d4p1ba_, d4p1bd_, d4p1bh_, d4p1bi_
      automated match to d3ge3c_
      complexed with act, fe, fes, na, peg
  16. Domain(s) for 4p1c:
    1. 2161005Domain d4p1cc_: 4p1c C: [259899]
      Other proteins in same PDB: d4p1ca_, d4p1cd_, d4p1ch_, d4p1ci_
      automated match to d3ge3c_
      complexed with fe, fes, peg
    2. 2161006Domain d4p1cf_: 4p1c F: [260214]
      Other proteins in same PDB: d4p1ca_, d4p1cd_, d4p1ch_, d4p1ci_
      automated match to d3ge3c_
      complexed with fe, fes, peg
  17. Domain(s) for 5tds:
    1. 2288788Domain d5tdsc_: 5tds C: [332089]
      Other proteins in same PDB: d5tdsa_, d5tdsd_
      automated match to d3q14c_
      complexed with cl, fe, mbn, mg
    2. 2288814Domain d5tdsf_: 5tds F: [332115]
      Other proteins in same PDB: d5tdsa_, d5tdsd_
      automated match to d3q14c_
      complexed with cl, fe, mbn, mg
  18. Domain(s) for 5tdt:
    1. 2288768Domain d5tdtc_: 5tdt C: [332069]
      Other proteins in same PDB: d5tdta_, d5tdtd_, d5tdte_, d5tdth_
      automated match to d3q14c_
      complexed with fe, mbn, per
    2. 2288812Domain d5tdtg_: 5tdt G: [332113]
      Other proteins in same PDB: d5tdta_, d5tdtd_, d5tdte_, d5tdth_
      automated match to d3q14c_
      complexed with fe, mbn, per
  19. Domain(s) for 5tdu:
  20. Domain(s) for 5tdv:
    1. 2288813Domain d5tdvg_: 5tdv G: [332114]
      Other proteins in same PDB: d5tdva_, d5tdvd_, d5tdve_, d5tdvh_
      automated match to d3q14c_
      complexed with fe, per
    2. 2288828Domain d5tdvc_: 5tdv C: [332129]
      Other proteins in same PDB: d5tdva_, d5tdvd_, d5tdve_, d5tdvh_
      automated match to d3q14c_
      complexed with fe, per

More info for Species Pseudomonas mendocina [TaxId:300] from d.15.12.0 automated matches

Timeline for Species Pseudomonas mendocina [TaxId:300] from d.15.12.0 automated matches: