Lineage for Species: Pseudomonas mendocina [TaxId: 300]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1990025Family a.25.1.2: Ribonucleotide reductase-like [47253] (9 protein domains)
  6. 1990319Protein automated matches [190435] (11 species)
    not a true protein
  7. 1990411Species Pseudomonas mendocina [TaxId:300] [188695] (20 PDB entries)

PDB entries in Species: Pseudomonas mendocina [TaxId: 300]:

  1. Domain(s) for 3dhg:
    1. 1990418Domain d3dhga_: 3dhg A: [173940]
      Other proteins in same PDB: d3dhgc_, d3dhgf_
      automated match to d1t0qa_
      complexed with azi, ca, fe
    2. 1990419Domain d3dhgd_: 3dhg D: [173942]
      Other proteins in same PDB: d3dhgc_, d3dhgf_
      automated match to d1t0qa_
      complexed with azi, ca, fe
  2. Domain(s) for 3dhh:
  3. Domain(s) for 3dhi:
  4. Domain(s) for 3ge3:
  5. Domain(s) for 3ge8:
    1. 1990428Domain d3ge8a_: 3ge8 A: [176570]
      Other proteins in same PDB: d3ge8c_, d3ge8e_, d3ge8g_, d3ge8h_
      automated match to d1t0qa_
      complexed with act, fe
    2. 1990429Domain d3ge8d_: 3ge8 D: [176572]
      Other proteins in same PDB: d3ge8c_, d3ge8e_, d3ge8g_, d3ge8h_
      automated match to d1t0qa_
      complexed with act, fe
  6. Domain(s) for 3i5j:
  7. Domain(s) for 3i63:
  8. Domain(s) for 3q14:
  9. Domain(s) for 3q2a:
  10. Domain(s) for 3q3m:
    1. 1990412Domain d3q3ma_: 3q3m A: [184186]
      Other proteins in same PDB: d3q3mc_, d3q3me_, d3q3mg_, d3q3mh_
      automated match to d1t0qa_
      complexed with fe, z82
    2. 1990413Domain d3q3md_: 3q3m D: [184188]
      Other proteins in same PDB: d3q3mc_, d3q3me_, d3q3mg_, d3q3mh_
      automated match to d1t0qa_
      complexed with fe, z82
  11. Domain(s) for 3q3n:
  12. Domain(s) for 3q3o:
  13. Domain(s) for 3ri7:
  14. Domain(s) for 3rmk:
    1. 1990420Domain d3rmka_: 3rmk A: [196049]
      Other proteins in same PDB: d3rmkc_, d3rmkf_
      automated match to d3dhgd_
      complexed with bml, ca, fe, pge
    2. 1990421Domain d3rmkd_: 3rmk D: [200499]
      Other proteins in same PDB: d3rmkc_, d3rmkf_
      automated match to d3rmka_
      complexed with bml, ca, fe, pge
  15. Domain(s) for 4p1b:
    1. 1990430Domain d4p1ba_: 4p1b A: [263408]
      Other proteins in same PDB: d4p1bc_, d4p1bf_, d4p1bh_, d4p1bi_
      automated match to d3ge8d_
      complexed with act, fe, fes, na, peg
    2. 1990431Domain d4p1bd_: 4p1b D: [263410]
      Other proteins in same PDB: d4p1bc_, d4p1bf_, d4p1bh_, d4p1bi_
      automated match to d3ge8d_
      complexed with act, fe, fes, na, peg
  16. Domain(s) for 4p1c:
    1. 1990432Domain d4p1ca_: 4p1c A: [260212]
      Other proteins in same PDB: d4p1cc_, d4p1cf_, d4p1ch_, d4p1ci_
      automated match to d3ge8d_
      complexed with fe, fes, peg
    2. 1990433Domain d4p1cd_: 4p1c D: [259897]
      Other proteins in same PDB: d4p1cc_, d4p1cf_, d4p1ch_, d4p1ci_
      automated match to d3ge8d_
      complexed with fe, fes, peg
  17. Domain(s) for 5tds:
    1. 2288793Domain d5tdsd_: 5tds D: [332094]
      Other proteins in same PDB: d5tdsc_, d5tdsf_
      automated match to d3dhgd_
      complexed with cl, fe, mbn, mg
    2. 2288911Domain d5tdsa_: 5tds A: [332212]
      Other proteins in same PDB: d5tdsc_, d5tdsf_
      automated match to d3dhgd_
      complexed with cl, fe, mbn, mg
  18. Domain(s) for 5tdt:
    1. 2288787Domain d5tdta_: 5tdt A: [332088]
      Other proteins in same PDB: d5tdtc_, d5tdte_, d5tdtg_, d5tdth_
      automated match to d3dhgd_
      complexed with fe, mbn, per
    2. 2288791Domain d5tdtd_: 5tdt D: [332092]
      Other proteins in same PDB: d5tdtc_, d5tdte_, d5tdtg_, d5tdth_
      automated match to d3dhgd_
      complexed with fe, mbn, per
  19. Domain(s) for 5tdu:
  20. Domain(s) for 5tdv:
    1. 2288792Domain d5tdva_: 5tdv A: [332093]
      Other proteins in same PDB: d5tdvc_, d5tdve_, d5tdvg_, d5tdvh_
      automated match to d3dhia_
      complexed with fe, per
    2. 2288800Domain d5tdvd_: 5tdv D: [332101]
      Other proteins in same PDB: d5tdvc_, d5tdve_, d5tdvg_, d5tdvh_
      automated match to d3dhia_
      complexed with fe, per

More info for Species Pseudomonas mendocina [TaxId:300] from a.25.1.2 automated matches

Timeline for Species Pseudomonas mendocina [TaxId:300] from a.25.1.2 automated matches: