SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Shigella flexneri [TaxId: 623]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2094257Family c.2.1.0: automated matches [191313] (1 protein)
    not a true family
  6. 2094258Protein automated matches [190069] (222 species)
    not a true protein
  7. 2095900Species Shigella flexneri [TaxId:623] [188679] (2 PDB entries)

PDB entries in Species: Shigella flexneri [TaxId: 623]:

  1. Domain(s) for 3f5s:
    1. 2095901Domain d3f5sa_: 3f5s A: [175504]
      automated match to d2c07a1
    2. 2095902Domain d3f5sb_: 3f5s B: [175505]
      automated match to d2c07a1
  2. Domain(s) for 3gy0:

More info for Species Shigella flexneri [TaxId:623] from c.2.1.0 automated matches

Timeline for Species Shigella flexneri [TaxId:623] from c.2.1.0 automated matches: