SCOPe 2.08: Species: Helicobacter pylori [TaxId: 85962]

Lineage for Species: Helicobacter pylori [TaxId: 85962]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)
Family c.67.1.0: automated matches [191328] (1 protein)
not a true family
Protein automated matches [190151] (166 species)
not a true protein
Species Helicobacter pylori [TaxId:85962] [188666] (10 PDB entries)

PDB entries in Species: Helicobacter pylori [TaxId: 85962]:

Domain(s) for 3ezs:
1. Domain d3ezsa1: 3ezs A:1-373 [175341]
  Other proteins in same PDB: d3ezsa2
  automated match to d2gb3e1
  complexed with edo, po4
2. Domain d3ezsb_: 3ezs B: [175342]
  Other proteins in same PDB: d3ezsa2
  automated match to d2gb3e1
  complexed with edo, po4
Domain(s) for 4l0o:
1. Domain d4l0oa_: 4l0o A: [230077]
  automated match to d1cl1b_
  complexed with plp, po4
2. Domain d4l0oc_: 4l0o C: [230080]
  automated match to d1cl1b_
  complexed with plp, po4
3. Domain d4l0oe_: 4l0o E: [230078]
  automated match to d1cl1b_
  complexed with plp, po4
4. Domain d4l0og_: 4l0o G: [230079]
  automated match to d1cl1b_
  complexed with plp, po4
5. Domain d4l0oh_: 4l0o H: [235256]
  automated match to d4l0oa_
  complexed with plp, po4
6. Domain d4l0ok_: 4l0o K: [235255]
  automated match to d4l0oa_
  complexed with plp, po4
7. Domain d4l0om_: 4l0o M: [235258]
  automated match to d4l0oa_
  complexed with plp, po4
8. Domain d4l0oo_: 4l0o O: [235257]
  automated match to d4l0oa_
  complexed with plp, po4
Domain(s) for 5wt2:
- Domain d5wt2a_: 5wt2 A: [342897]
  automated match to d4eb5a_
  complexed with cl, ipa, plp
Domain(s) for 5wt4:
- Domain d5wt4a_: 5wt4 A: [342877]
  automated match to d4eb5a_
  complexed with c6p, ipa
Domain(s) for 5wt5:
1. Domain d5wt5a_: 5wt5 A: [342878]
  automated match to d4eb5a_
  complexed with hcs, ipa
2. Domain d5wt5b_: 5wt5 B: [342933]
  automated match to d4eb5a_
  complexed with hcs, ipa
3. Domain d5wt5c_: 5wt5 C: [342927]
  automated match to d4eb5a_
  complexed with hcs, ipa
4. Domain d5wt5d_: 5wt5 D: [342873]
  automated match to d4eb5a_
  complexed with hcs, ipa
Domain(s) for 6f93:
1. Domain d6f93a_: 6f93 A: [361670]
  automated match to d5vc2b_
2. Domain d6f93b_: 6f93 B: [361642]
  automated match to d5vc2b_
Domain(s) for 6kg0:
- Domain d6kg0a_: 6kg0 A: [375603]
  automated match to d5wt5c_
  complexed with c6p, cl, ipa
Domain(s) for 6kg1:
- Domain d6kg1a_: 6kg1 A: [375563]
  automated match to d5wt5c_
  complexed with cl, ipa, pda
Domain(s) for 7cet:
- Domain d7ceta_: 7cet A: [404602]
  automated match to d5wt5c_
  complexed with 7ts, cl, ipa
Domain(s) for 7ceu:
- Domain d7ceua_: 7ceu A: [404709]
  automated match to d5wt5c_
  complexed with 7ts, ipa

More info for Species Helicobacter pylori [TaxId:85962] from c.67.1.0 automated matches

Timeline for Species Helicobacter pylori [TaxId:85962] from c.67.1.0 automated matches:

Species Helicobacter pylori [TaxId:85962] from c.67.1.0 automated matches first appeared in SCOPe 2.01
Species Helicobacter pylori [TaxId:85962] from c.67.1.0 automated matches appears in SCOPe 2.07