Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.08
  2. 3029608Class g: Small proteins [56992] (100 folds)
  3. 3036286Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. 3037321Superfamily g.41.11: Ran binding protein zinc finger-like [90209] (2 families) (S)
    contains CxxxxC-x(n)-CxxC zinc-binding site; similar to the Sec23/24 zinc finger domain
  5. 3037322Family g.41.11.1: Ran binding protein zinc finger-like [90210] (7 proteins)
  6. 3037334Protein Nuclear pore complex protein nup153 [161175] (2 species)
  7. 3037338Species Norway rat (Rattus norvegicus) [TaxId:10116] [188480] (8 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 2k0c:
    • 3037347Domain d2k0ca_: 2k0c A: [242337]
      automated match to d3ch5b_
      protein/DNA complex; protein/RNA complex; complexed with zn
  2. Domain(s) for 3ch5:
  3. Domain(s) for 3gj3:
    • 3037339Domain d3gj3b_: 3gj3 B: [176686]
      Other proteins in same PDB: d3gj3a_
      automated match to d2gqea1
      protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
  4. Domain(s) for 3gj5:
    1. 3037342Domain d3gj5b_: 3gj5 B: [176690]
      Other proteins in same PDB: d3gj5a_, d3gj5c_
      automated match to d2gqea1
      protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
    2. 3037343Domain d3gj5d_: 3gj5 D: [176692]
      Other proteins in same PDB: d3gj5a_, d3gj5c_
      automated match to d2gqea1
      protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
  5. Domain(s) for 3gj7:
    1. 3037344Domain d3gj7b_: 3gj7 B: [239321]
      Other proteins in same PDB: d3gj7a_, d3gj7c_
      automated match to d3ch5b_
      protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
    2. 3037345Domain d3gj7d_: 3gj7 D: [239322]
      Other proteins in same PDB: d3gj7a_, d3gj7c_
      automated match to d3ch5b_
      protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
  6. Domain(s) for 3gj8:
    1. 3037340Domain d3gj8b_: 3gj8 B: [239323]
      Other proteins in same PDB: d3gj8a_, d3gj8c_
      automated match to d3ch5b_
      protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
    2. 3037341Domain d3gj8d_: 3gj8 D: [239324]
      Other proteins in same PDB: d3gj8a_, d3gj8c_
      automated match to d3ch5b_
      protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
  7. Domain(s) for 7mo3:
    1. 3086453Domain d7mo3d1: 7mo3 D:781-817 [422770]
      Other proteins in same PDB: d7mo3a_, d7mo3b2, d7mo3c_, d7mo3d2
      automated match to d3ch5b_
      complexed with gdp, mg, zn
    2. 3086482Domain d7mo3b1: 7mo3 B:781-817 [422799]
      Other proteins in same PDB: d7mo3a_, d7mo3b2, d7mo3c_, d7mo3d2
      automated match to d3ch5b_
      complexed with gdp, mg, zn
  8. Domain(s) for 7mo4:
    1. 3086487Domain d7mo4b1: 7mo4 B:781-817 [422804]
      Other proteins in same PDB: d7mo4a_, d7mo4b2, d7mo4c_, d7mo4d2
      automated match to d3ch5b_
      complexed with gdp, mg, zn
    2. 3086514Domain d7mo4d1: 7mo4 D:781-817 [422831]
      Other proteins in same PDB: d7mo4a_, d7mo4b2, d7mo4c_, d7mo4d2
      automated match to d3ch5b_
      complexed with gdp, mg, zn

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from g.41.11.1 Nuclear pore complex protein nup153

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from g.41.11.1 Nuclear pore complex protein nup153: