Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2130990Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2130991Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2132229Family c.67.1.0: automated matches [191328] (1 protein)
    not a true family
  6. 2132230Protein automated matches [190151] (121 species)
    not a true protein
  7. 2132555Species Human (Homo sapiens) [TaxId:9606] [188446] (23 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2nmp:
    1. 2132587Domain d2nmpa_: 2nmp A: [166303]
      automated match to d1n8pa_
      complexed with plp
    2. 2132588Domain d2nmpb_: 2nmp B: [166304]
      automated match to d1n8pa_
      complexed with plp
    3. 2132589Domain d2nmpc_: 2nmp C: [166305]
      automated match to d1n8pa_
      complexed with plp
    4. 2132590Domain d2nmpd_: 2nmp D: [166306]
      automated match to d1n8pa_
      complexed with plp
  2. Domain(s) for 2qlr:
    1. 2132607Domain d2qlra_: 2qlr A: [167714]
      automated match to d1x0ma1
      complexed with gol
    2. 2132608Domain d2qlrb_: 2qlr B: [167715]
      automated match to d1x0ma1
      complexed with gol
    3. 2132609Domain d2qlrc_: 2qlr C: [167716]
      automated match to d1x0ma1
      complexed with gol
    4. 2132610Domain d2qlrd_: 2qlr D: [167717]
      automated match to d1x0ma1
      complexed with gol
  3. Domain(s) for 2r2n:
    1. 2132570Domain d2r2na_: 2r2n A: [167938]
      automated match to d1x0ma1
      complexed with gol, kyn, pmp
    2. 2132571Domain d2r2nb_: 2r2n B: [167939]
      automated match to d1x0ma1
      complexed with gol, kyn, pmp
    3. 2132572Domain d2r2nc_: 2r2n C: [167940]
      automated match to d1x0ma1
      complexed with gol, kyn, pmp
    4. 2132573Domain d2r2nd_: 2r2n D: [167941]
      automated match to d1x0ma1
      complexed with gol, kyn, pmp
  4. Domain(s) for 2vgz:
    1. 2132611Domain d2vgza_: 2vgz A: [168597]
      automated match to d1x0ma1
      complexed with iod, plp
    2. 2132612Domain d2vgzb_: 2vgz B: [168598]
      automated match to d1x0ma1
      complexed with iod, plp
  5. Domain(s) for 2xh1:
    1. 2132576Domain d2xh1a_: 2xh1 A: [170089]
      automated match to d1x0ma1
      complexed with bf5, gol, iod, plp
    2. 2132577Domain d2xh1b_: 2xh1 B: [170090]
      automated match to d1x0ma1
      complexed with bf5, gol, iod, plp
  6. Domain(s) for 3cog:
    1. 2132562Domain d3coga_: 3cog A: [173374]
      automated match to d1n8pa_
      complexed with 2ag, gol, no3, peg, plp
    2. 2132563Domain d3cogb_: 3cog B: [173375]
      automated match to d1n8pa_
      complexed with 2ag, gol, no3, peg, plp
    3. 2132564Domain d3cogc_: 3cog C: [173376]
      automated match to d1n8pa_
      complexed with 2ag, gol, no3, peg, plp
    4. 2132565Domain d3cogd_: 3cog D: [173377]
      automated match to d1n8pa_
      complexed with 2ag, gol, no3, peg, plp
  7. Domain(s) for 3dc1:
    1. 2132595Domain d3dc1a_: 3dc1 A: [173809]
      automated match to d1x0ma1
      complexed with akg, gol
    2. 2132596Domain d3dc1b_: 3dc1 B: [173810]
      automated match to d1x0ma1
      complexed with akg, gol
    3. 2132597Domain d3dc1c_: 3dc1 C: [173811]
      automated match to d1x0ma1
      complexed with akg, gol
    4. 2132598Domain d3dc1d_: 3dc1 D: [173812]
      automated match to d1x0ma1
      complexed with akg, gol
  8. Domain(s) for 3dyd:
    1. 2132582Domain d3dyda_: 3dyd A: [209354]
      automated match to d1bw0b_
      complexed with plp
    2. 2132583Domain d3dydb_: 3dyd B: [209355]
      automated match to d1bw0b_
      complexed with plp
  9. Domain(s) for 3e77:
    1. 2132584Domain d3e77a1: 3e77 A:17-370 [209408]
      Other proteins in same PDB: d3e77a2, d3e77b2, d3e77c2
      automated match to d3qboa_
      complexed with gol, plp
    2. 2132585Domain d3e77b1: 3e77 B:17-370 [209409]
      Other proteins in same PDB: d3e77a2, d3e77b2, d3e77c2
      automated match to d3qboa_
      complexed with gol, plp
    3. 2132586Domain d3e77c1: 3e77 C:17-369 [209410]
      Other proteins in same PDB: d3e77a2, d3e77b2, d3e77c2
      automated match to d3qboa_
      complexed with gol, plp
  10. Domain(s) for 3elp:
    1. 2132591Domain d3elpa_: 3elp A: [199338]
      automated match to d3elpd_
    2. 2132592Domain d3elpb_: 3elp B: [199339]
      automated match to d3elpd_
    3. 2132593Domain d3elpc_: 3elp C: [199340]
      automated match to d3elpd_
    4. 2132594Domain d3elpd_: 3elp D: [196097]
      automated match to d3cogc_
  11. Domain(s) for 3ii0:
    1. 2132566Domain d3ii0a1: 3ii0 A:15-412 [246912]
      Other proteins in same PDB: d3ii0a2, d3ii0b2, d3ii0c2, d3ii0c3, d3ii0d2, d3ii0d3
      automated match to d4eu1a_
      complexed with edo, plp, tar
    2. 2132567Domain d3ii0b1: 3ii0 B:15-412 [246913]
      Other proteins in same PDB: d3ii0a2, d3ii0b2, d3ii0c2, d3ii0c3, d3ii0d2, d3ii0d3
      automated match to d4eu1a_
      complexed with edo, plp, tar
    3. 2132568Domain d3ii0c1: 3ii0 C:14-412 [246914]
      Other proteins in same PDB: d3ii0a2, d3ii0b2, d3ii0c2, d3ii0c3, d3ii0d2, d3ii0d3
      automated match to d4eu1a_
      complexed with edo, plp, tar
    4. 2132569Domain d3ii0d1: 3ii0 D:14-412 [246915]
      Other proteins in same PDB: d3ii0a2, d3ii0b2, d3ii0c2, d3ii0c3, d3ii0d2, d3ii0d3
      automated match to d4eu1a_
      complexed with edo, plp, tar
  12. Domain(s) for 4e1o:
    1. 2132556Domain d4e1oa1: 4e1o A:2-477 [201766]
      Other proteins in same PDB: d4e1oa2, d4e1ob2, d4e1oc2, d4e1od2, d4e1oe2, d4e1of2
      automated match to d4e1oc_
      complexed with plp, pvh
    2. 2132557Domain d4e1ob1: 4e1o B:2-477 [201767]
      Other proteins in same PDB: d4e1oa2, d4e1ob2, d4e1oc2, d4e1od2, d4e1oe2, d4e1of2
      automated match to d4e1oc_
      complexed with plp, pvh
    3. 2132558Domain d4e1oc1: 4e1o C:2-477 [194948]
      Other proteins in same PDB: d4e1oa2, d4e1ob2, d4e1oc2, d4e1od2, d4e1oe2, d4e1of2
      automated match to d3rcha_
      complexed with plp, pvh
    4. 2132559Domain d4e1od1: 4e1o D:2-477 [201768]
      Other proteins in same PDB: d4e1oa2, d4e1ob2, d4e1oc2, d4e1od2, d4e1oe2, d4e1of2
      automated match to d4e1oc_
      complexed with plp, pvh
    5. 2132560Domain d4e1oe1: 4e1o E:2-477 [201769]
      Other proteins in same PDB: d4e1oa2, d4e1ob2, d4e1oc2, d4e1od2, d4e1oe2, d4e1of2
      automated match to d4e1oc_
      complexed with plp, pvh
    6. 2132561Domain d4e1of1: 4e1o F:2-477 [201770]
      Other proteins in same PDB: d4e1oa2, d4e1ob2, d4e1oc2, d4e1od2, d4e1oe2, d4e1of2
      automated match to d4e1oc_
      complexed with plp, pvh
  13. Domain(s) for 4gdy:
    1. 2132599Domain d4gdya1: 4gdy A:1-425 [221857]
      Other proteins in same PDB: d4gdya2, d4gdyb2
      automated match to d4gebb_
      complexed with 0x1
    2. 2132600Domain d4gdyb1: 4gdy B:1-425 [221858]
      Other proteins in same PDB: d4gdya2, d4gdyb2
      automated match to d4gebb_
      complexed with 0x1
  14. Domain(s) for 4ge4:
    1. 2132605Domain d4ge4a1: 4ge4 A:1-425 [221867]
      Other proteins in same PDB: d4ge4a2, d4ge4b2
      automated match to d4gebb_
      complexed with 0ke
    2. 2132606Domain d4ge4b1: 4ge4 B:1-425 [221868]
      Other proteins in same PDB: d4ge4a2, d4ge4b2
      automated match to d4gebb_
      complexed with 0ke
  15. Domain(s) for 4ge7:
    1. 2132580Domain d4ge7a1: 4ge7 A:1-425 [221869]
      Other proteins in same PDB: d4ge7a2, d4ge7b2
      automated match to d4gebb_
      complexed with 0k5
    2. 2132581Domain d4ge7b1: 4ge7 B:1-425 [221870]
      Other proteins in same PDB: d4ge7a2, d4ge7b2
      automated match to d4gebb_
      complexed with 0k5
  16. Domain(s) for 4ge9:
    1. 2132601Domain d4ge9a1: 4ge9 A:1-425 [221871]
      Other proteins in same PDB: d4ge9a2, d4ge9b2, d4ge9c2, d4ge9d2
      automated match to d4gebb_
      complexed with 0l0
    2. 2132602Domain d4ge9b1: 4ge9 B:1-425 [221872]
      Other proteins in same PDB: d4ge9a2, d4ge9b2, d4ge9c2, d4ge9d2
      automated match to d4gebb_
      complexed with 0l0
    3. 2132603Domain d4ge9c1: 4ge9 C:1-425 [221873]
      Other proteins in same PDB: d4ge9a2, d4ge9b2, d4ge9c2, d4ge9d2
      automated match to d4gebb_
      complexed with 0l0
    4. 2132604Domain d4ge9d1: 4ge9 D:1-425 [221874]
      Other proteins in same PDB: d4ge9a2, d4ge9b2, d4ge9c2, d4ge9d2
      automated match to d4gebb_
      complexed with 0l0
  17. Domain(s) for 4geb:
    1. 2132574Domain d4geba1: 4geb A:1-425 [193066]
      Other proteins in same PDB: d4geba2, d4gebb2
      automated match to d2r2na_
      complexed with 0ld, so4
    2. 2132575Domain d4gebb1: 4geb B:1-425 [193065]
      Other proteins in same PDB: d4geba2, d4gebb2
      automated match to d2r2na_
      complexed with 0ld, so4
  18. Domain(s) for 5efs:
  19. Domain(s) for 5eig:
    1. 2281551Domain d5eigd_: 5eig D: [324852]
      automated match to d3cogc_
      complexed with cys, so4
    2. 2281558Domain d5eigf_: 5eig F: [324859]
      automated match to d3cogc_
      complexed with cys, so4
    3. 2281602Domain d5eiga_: 5eig A: [324903]
      automated match to d3cogc_
      complexed with cys, so4
    4. 2281725Domain d5eigb_: 5eig B: [325026]
      automated match to d3cogc_
      complexed with cys, so4
    5. 2281742Domain d5eigc_: 5eig C: [325043]
      automated match to d3cogc_
      complexed with cys, so4
    6. 2281748Domain d5eigh_: 5eig H: [325049]
      automated match to d3cogc_
      complexed with cys, so4
    7. 2281763Domain d5eigg_: 5eig G: [325064]
      automated match to d3cogc_
      complexed with cys, so4
    8. 2281766Domain d5eige_: 5eig E: [325067]
      automated match to d3cogc_
      complexed with cys, so4
  20. Domain(s) for 5eun:
  21. Domain(s) for 5tf5:
    1. 2280469Domain d5tf5b_: 5tf5 B: [323770]
      automated match to d1wsta1
      complexed with 7ar
    2. 2280553Domain d5tf5a_: 5tf5 A: [323854]
      automated match to d1wsta1
      complexed with 7ar
  22. Domain(s) for 5tsu:
    1. 2296806Domain d5tsug_: 5tsu G: [340107]
      automated match to d3cogc_
      complexed with cys, lpi, met, so4
    2. 2296815Domain d5tsud_: 5tsu D: [340116]
      automated match to d3cogc_
      complexed with cys, lpi, met, so4
    3. 2296817Domain d5tsue_: 5tsu E: [340118]
      automated match to d3cogc_
      complexed with cys, lpi, met, so4
    4. 2296825Domain d5tsuf_: 5tsu F: [340126]
      automated match to d3cogc_
      complexed with cys, lpi, met, so4
    5. 2296830Domain d5tsuh_: 5tsu H: [340131]
      automated match to d3cogc_
      complexed with cys, lpi, met, so4
    6. 2296838Domain d5tsua_: 5tsu A: [340139]
      automated match to d3cogc_
      complexed with cys, lpi, met, so4
    7. 2296898Domain d5tsuc_: 5tsu C: [340199]
      automated match to d3cogc_
      complexed with cys, lpi, met, so4
    8. 2297030Domain d5tsub_: 5tsu B: [340331]
      automated match to d3cogc_
      complexed with cys, lpi, met, so4
  23. Domain(s) for 5tt2:
    1. 2296785Domain d5tt2c_: 5tt2 C: [340086]
      automated match to d3cogc_
      complexed with so4
    2. 2296837Domain d5tt2d_: 5tt2 D: [340138]
      automated match to d3cogc_
      complexed with so4

More info for Species Human (Homo sapiens) [TaxId:9606] from c.67.1.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from c.67.1.0 automated matches: