Lineage for Species: Pseudomonas putida [TaxId: 303]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2841375Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
    has additional subdomain(s) that are not in the common domain
  6. 2842913Protein automated matches [190085] (59 species)
    not a true protein
  7. 2843396Species Pseudomonas putida [TaxId:303] [188252] (3 PDB entries)

PDB entries in Species: Pseudomonas putida [TaxId: 303]:

  1. Domain(s) for 2q2q:
    1. 2843401Domain d2q2qa_: 2q2q A: [198269]
      automated match to d2q2wd_
      complexed with nad
    2. 2843402Domain d2q2qb_: 2q2q B: [198270]
      automated match to d2q2wd_
      complexed with nad
    3. 2843403Domain d2q2qc_: 2q2q C: [198271]
      automated match to d2q2wd_
      complexed with nad
    4. 2843404Domain d2q2qd_: 2q2q D: [198272]
      automated match to d2q2wd_
      complexed with nad
    5. 2843405Domain d2q2qe_: 2q2q E: [198273]
      automated match to d2q2wd_
      complexed with nad
    6. 2843406Domain d2q2qf_: 2q2q F: [198274]
      automated match to d2q2wd_
      complexed with nad
    7. 2843407Domain d2q2qg_: 2q2q G: [198275]
      automated match to d2q2wd_
      complexed with nad
    8. 2843408Domain d2q2qh_: 2q2q H: [193538]
      automated match to d2q2wd_
      complexed with nad
  2. Domain(s) for 2q2v:
    1. 2843397Domain d2q2va_: 2q2v A: [205734]
      automated match to d2q2wd_
      complexed with nad
    2. 2843398Domain d2q2vb_: 2q2v B: [205735]
      automated match to d2q2wd_
      complexed with nad
    3. 2843399Domain d2q2vc_: 2q2v C: [205736]
      automated match to d2q2wd_
      complexed with nad
    4. 2843400Domain d2q2vd_: 2q2v D: [205737]
      automated match to d2q2wd_
      complexed with nad
  3. Domain(s) for 2q2w:
    1. 2843409Domain d2q2wa_: 2q2w A: [198276]
      automated match to d2q2wd_
    2. 2843410Domain d2q2wb_: 2q2w B: [198277]
      automated match to d2q2wd_
    3. 2843411Domain d2q2wc_: 2q2w C: [198278]
      automated match to d2q2wd_
    4. 2843412Domain d2q2wd_: 2q2w D: [167402]
      automated match to d1wmba1

More info for Species Pseudomonas putida [TaxId:303] from c.2.1.2 automated matches

Timeline for Species Pseudomonas putida [TaxId:303] from c.2.1.2 automated matches: