Lineage for Species: Desulfovibrio fructosovorans [TaxId: 878]

  1. Root: SCOPe 2.06
  2. 2243857Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds)
  3. 2249152Fold e.19: HydA/Nqo6-like [56769] (1 superfamily)
    2 domains: (1) alpa/beta; (2) Fe-S cluster-bound
  4. 2249153Superfamily e.19.1: HydA/Nqo6-like [56770] (3 families) (S)
  5. 2249154Family e.19.1.1: Nickel-iron hydrogenase, small subunit [56771] (2 proteins)
  6. 2249184Protein automated matches [190110] (7 species)
    not a true protein
  7. 2249221Species Desulfovibrio fructosovorans [TaxId:878] [188149] (12 PDB entries)

PDB entries in Species: Desulfovibrio fructosovorans [TaxId: 878]:

  1. Domain(s) for 1yqw:
    1. 2249231Domain d1yqwa_: 1yqw A: [162279]
      Other proteins in same PDB: d1yqwq_, d1yqwr_, d1yqws_
      automated match to d1frfs_
      complexed with bct, f3s, fco, fe2, gol, mg, ni, per, sf4
    2. 2249232Domain d1yqwb_: 1yqw B: [162280]
      Other proteins in same PDB: d1yqwq_, d1yqwr_, d1yqws_
      automated match to d1frfs_
      complexed with bct, f3s, fco, fe2, gol, mg, ni, per, sf4
    3. 2249233Domain d1yqwc_: 1yqw C: [162281]
      Other proteins in same PDB: d1yqwq_, d1yqwr_, d1yqws_
      automated match to d1frfs_
      complexed with bct, f3s, fco, fe2, gol, mg, ni, per, sf4
  2. Domain(s) for 1yrq:
    1. 2249237Domain d1yrqa_: 1yrq A: [162286]
      Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
      automated match to d1frfs_
      complexed with f3s, fco, mg, ni, sf4
    2. 2249238Domain d1yrqb_: 1yrq B: [162287]
      Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
      automated match to d1frfs_
      complexed with f3s, fco, mg, ni, sf4
    3. 2249239Domain d1yrqc_: 1yrq C: [162288]
      Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
      automated match to d1frfs_
      complexed with f3s, fco, mg, ni, sf4
    4. 2249240Domain d1yrqd_: 1yrq D: [162289]
      Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
      automated match to d1frfs_
      complexed with f3s, fco, mg, ni, sf4
    5. 2249241Domain d1yrqf_: 1yrq F: [162290]
      Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
      automated match to d1frfs_
      complexed with f3s, fco, mg, ni, sf4
    6. 2249242Domain d1yrqg_: 1yrq G: [162291]
      Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
      automated match to d1frfs_
      complexed with f3s, fco, mg, ni, sf4
  3. Domain(s) for 3cur:
    1. 2249243Domain d3cura_: 3cur A: [173472]
      Other proteins in same PDB: d3curh_, d3curi_, d3curj_
      automated match to d1frfs_
      complexed with f3s, fco, gol, mg, ni, per, sf4; mutant
    2. 2249244Domain d3curb_: 3cur B: [173473]
      Other proteins in same PDB: d3curh_, d3curi_, d3curj_
      automated match to d1frfs_
      complexed with f3s, fco, gol, mg, ni, per, sf4; mutant
    3. 2249245Domain d3curc_: 3cur C: [173474]
      Other proteins in same PDB: d3curh_, d3curi_, d3curj_
      automated match to d1frfs_
      complexed with f3s, fco, gol, mg, ni, per, sf4; mutant
  4. Domain(s) for 3cus:
    1. 2249246Domain d3cusa_: 3cus A: [173478]
      Other proteins in same PDB: d3cusq_, d3cusr_, d3cuss_
      automated match to d1frfs_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
    2. 2249247Domain d3cusb_: 3cus B: [173479]
      Other proteins in same PDB: d3cusq_, d3cusr_, d3cuss_
      automated match to d1frfs_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
    3. 2249248Domain d3cusc_: 3cus C: [173480]
      Other proteins in same PDB: d3cusq_, d3cusr_, d3cuss_
      automated match to d1frfs_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
  5. Domain(s) for 3h3x:
    1. 2249252Domain d3h3xa_: 3h3x A: [177169]
      Other proteins in same PDB: d3h3xq_, d3h3xr_, d3h3xs_
      automated match to d1frfs_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
    2. 2249253Domain d3h3xb_: 3h3x B: [177170]
      Other proteins in same PDB: d3h3xq_, d3h3xr_, d3h3xs_
      automated match to d1frfs_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
    3. 2249254Domain d3h3xc_: 3h3x C: [177171]
      Other proteins in same PDB: d3h3xq_, d3h3xr_, d3h3xs_
      automated match to d1frfs_
      complexed with f3s, fco, gol, mg, ni, sf4; mutant
  6. Domain(s) for 4ue2:
    1. 2249249Domain d4ue2a_: 4ue2 A: [270687]
      Other proteins in same PDB: d4ue2q_, d4ue2r_, d4ue2s_
      automated match to d4urhc_
      complexed with f3s, fco, gol, mg, ni, sf4
    2. 2249250Domain d4ue2b_: 4ue2 B: [270683]
      Other proteins in same PDB: d4ue2q_, d4ue2r_, d4ue2s_
      automated match to d4urhc_
      complexed with f3s, fco, gol, mg, ni, sf4
    3. 2249251Domain d4ue2c_: 4ue2 C: [270688]
      Other proteins in same PDB: d4ue2q_, d4ue2r_, d4ue2s_
      automated match to d4urhc_
      complexed with f3s, fco, gol, mg, ni, sf4
  7. Domain(s) for 4ue6:
    1. 2249255Domain d4ue6a_: 4ue6 A: [270674]
      Other proteins in same PDB: d4ue6q_, d4ue6r_, d4ue6s_
      automated match to d4urhc_
      complexed with f3s, fco, gol, mg, ni, sf4
    2. 2249256Domain d4ue6b_: 4ue6 B: [270675]
      Other proteins in same PDB: d4ue6q_, d4ue6r_, d4ue6s_
      automated match to d4urhc_
      complexed with f3s, fco, gol, mg, ni, sf4
    3. 2249257Domain d4ue6c_: 4ue6 C: [270680]
      Other proteins in same PDB: d4ue6q_, d4ue6r_, d4ue6s_
      automated match to d4urhc_
      complexed with f3s, fco, gol, mg, ni, sf4
  8. Domain(s) for 4upe:
    1. 2249234Domain d4upea_: 4upe A: [260826]
      Other proteins in same PDB: d4upeq_, d4uper_, d4upes_
      automated match to d1ubks_
      complexed with ca, f3s, fco, gol, mes, ni, po4, sf4; mutant
    2. 2249235Domain d4upeb_: 4upe B: [260827]
      Other proteins in same PDB: d4upeq_, d4uper_, d4upes_
      automated match to d1ubks_
      complexed with ca, f3s, fco, gol, mes, ni, po4, sf4; mutant
    3. 2249236Domain d4upec_: 4upe C: [263988]
      Other proteins in same PDB: d4upeq_, d4uper_, d4upes_
      automated match to d1ubks_
      complexed with ca, f3s, fco, gol, mes, ni, po4, sf4; mutant
  9. Domain(s) for 4upv:
    1. 2249229Domain d4upva_: 4upv A: [263993]
      Other proteins in same PDB: d4upvq_, d4upvr_
      automated match to d1ubks_
      complexed with cl, f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
    2. 2249230Domain d4upvb_: 4upv B: [263994]
      Other proteins in same PDB: d4upvq_, d4upvr_
      automated match to d1ubks_
      complexed with cl, f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
  10. Domain(s) for 4uql:
    1. 2249222Domain d4uqla_: 4uql A: [267471]
      Other proteins in same PDB: d4uqlq_, d4uqlr_
      automated match to d1ubks_
      complexed with cl, f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
    2. 2249223Domain d4uqlb_: 4uql B: [267472]
      Other proteins in same PDB: d4uqlq_, d4uqlr_
      automated match to d1ubks_
      complexed with cl, f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
  11. Domain(s) for 4uqp:
    1. 2249224Domain d4uqpa_: 4uqp A: [267475]
      Other proteins in same PDB: d4uqpq_, d4uqpr_
      automated match to d1ubks_
      complexed with f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
    2. 2249225Domain d4uqpb_: 4uqp B: [267476]
      Other proteins in same PDB: d4uqpq_, d4uqpr_
      automated match to d1ubks_
      complexed with f3s, fco, gly, gol, h2s, mg, ni, sf4, sot; mutant
  12. Domain(s) for 4urh:
    1. 2249226Domain d4urha_: 4urh A: [263996]
      Other proteins in same PDB: d4urhq_, d4urhr_, d4urhs_
      automated match to d1ubks_
      complexed with f3s, fco, gol, mg, ni, sf4
    2. 2249227Domain d4urhb_: 4urh B: [263997]
      Other proteins in same PDB: d4urhq_, d4urhr_, d4urhs_
      automated match to d1ubks_
      complexed with f3s, fco, gol, mg, ni, sf4
    3. 2249228Domain d4urhc_: 4urh C: [263998]
      Other proteins in same PDB: d4urhq_, d4urhr_, d4urhs_
      automated match to d1ubks_
      complexed with f3s, fco, gol, mg, ni, sf4

More info for Species Desulfovibrio fructosovorans [TaxId:878] from e.19.1.1 automated matches

Timeline for Species Desulfovibrio fructosovorans [TaxId:878] from e.19.1.1 automated matches: