Lineage for Species: Jellyfish (Aequorea victoria) [TaxId: 6100]

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1643322Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 1643323Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 1643324Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)
  6. 1643577Protein automated matches [190406] (14 species)
    not a true protein
  7. 1643739Species Jellyfish (Aequorea victoria) [TaxId:6100] [188134] (38 PDB entries)

PDB entries in Species: Jellyfish (Aequorea victoria) [TaxId: 6100]:

  1. Domain(s) for 1w7s:
    1. 1643777Domain d1w7sa_: 1w7s A: [161907]
      automated match to d1hcjc_
    2. 1643778Domain d1w7sb_: 1w7s B: [161908]
      automated match to d1hcjc_
    3. 1643779Domain d1w7sc_: 1w7s C: [161909]
      automated match to d1hcjc_
    4. 1643780Domain d1w7sd_: 1w7s D: [161910]
      automated match to d1hcjc_
  2. Domain(s) for 1w7t:
    1. 1643781Domain d1w7ta_: 1w7t A: [161911]
      automated match to d1hcjc_
    2. 1643782Domain d1w7tb_: 1w7t B: [161912]
      automated match to d1hcjc_
    3. 1643783Domain d1w7tc_: 1w7t C: [161913]
      automated match to d1hcjc_
    4. 1643784Domain d1w7td_: 1w7t D: [161914]
      automated match to d1hcjc_
  3. Domain(s) for 1w7u:
    1. 1643785Domain d1w7ua_: 1w7u A: [161915]
      automated match to d1hcjc_
    2. 1643786Domain d1w7ub_: 1w7u B: [161916]
      automated match to d1hcjc_
    3. 1643787Domain d1w7uc_: 1w7u C: [161917]
      automated match to d1hcjc_
    4. 1643788Domain d1w7ud_: 1w7u D: [161918]
      automated match to d1hcjc_
  4. Domain(s) for 1yhg:
    1. 1643793Domain d1yhga_: 1yhg A: [162201]
      automated match to d1qyoa_
    2. 1643794Domain d1yhgb_: 1yhg B: [162202]
      automated match to d1qyoa_
  5. Domain(s) for 1yhh:
  6. Domain(s) for 1yhi:
  7. Domain(s) for 1yj2:
  8. Domain(s) for 1yjf:
  9. Domain(s) for 1z1p:
  10. Domain(s) for 1z1q:
  11. Domain(s) for 2b3p:
  12. Domain(s) for 2b3q:
    1. 1643789Domain d2b3qa_: 2b3q A: [162985]
      automated match to d1qyoa_
      complexed with mg
    2. 1643790Domain d2b3qb_: 2b3q B: [162986]
      automated match to d1qyoa_
      complexed with mg
    3. 1643791Domain d2b3qc_: 2b3q C: [162987]
      automated match to d1qyoa_
      complexed with mg
    4. 1643792Domain d2b3qd_: 2b3q D: [162988]
      automated match to d1qyoa_
      complexed with mg
  13. Domain(s) for 2due:
  14. Domain(s) for 2duf:
  15. Domain(s) for 2dug:
  16. Domain(s) for 2duh:
  17. Domain(s) for 2dui:
  18. Domain(s) for 2hqz:
  19. Domain(s) for 2q57:
  20. Domain(s) for 2wsn:
  21. Domain(s) for 2wso:
  22. Domain(s) for 2wur:
  23. Domain(s) for 2y0g:
  24. Domain(s) for 2ydz:
  25. Domain(s) for 2ye0:
  26. Domain(s) for 2ye1:
  27. Domain(s) for 3ed8:
    1. 1643796Domain d3ed8a_: 3ed8 A: [174857]
      automated match to d1qyoa_
    2. 1643797Domain d3ed8b_: 3ed8 B: [174858]
      automated match to d1qyoa_
    3. 1643798Domain d3ed8c_: 3ed8 C: [174859]
      automated match to d1qyoa_
    4. 1643799Domain d3ed8d_: 3ed8 D: [174860]
      automated match to d1qyoa_
    5. 1643800Domain d3ed8e_: 3ed8 E: [174861]
      automated match to d1qyoa_
  28. Domain(s) for 3st2:
    1. 1643767Domain d3st2a_: 3st2 A: [185513]
      automated match to d1huya_
      complexed with po4
    2. 1643768Domain d3st2b_: 3st2 B: [185514]
      automated match to d1huya_
      complexed with po4
    3. 1643769Domain d3st2c_: 3st2 C: [185515]
      automated match to d1huya_
      complexed with po4
  29. Domain(s) for 3st3:
    1. 1643763Domain d3st3a_: 3st3 A: [185516]
      automated match to d1huya_
      complexed with po4
    2. 1643764Domain d3st3b_: 3st3 B: [185517]
      automated match to d1huya_
      complexed with po4
    3. 1643765Domain d3st3c_: 3st3 C: [185518]
      automated match to d1huya_
      complexed with po4
  30. Domain(s) for 3st4:
    1. 1643771Domain d3st4a_: 3st4 A: [185519]
      automated match to d1huya_
      complexed with po4
    2. 1643772Domain d3st4b_: 3st4 B: [185520]
      automated match to d1huya_
      complexed with po4
    3. 1643773Domain d3st4c_: 3st4 C: [185521]
      automated match to d1huya_
      complexed with po4
  31. Domain(s) for 3ztf:
  32. Domain(s) for 4ar7:
  33. Domain(s) for 4as8:
  34. Domain(s) for 4b5y:
  35. Domain(s) for 4ka9:
  36. Domain(s) for 4kag:
  37. Domain(s) for 4kex:
  38. Domain(s) for 4ogs:

More info for Species Jellyfish (Aequorea victoria) [TaxId:6100] from d.22.1.1 automated matches

Timeline for Species Jellyfish (Aequorea victoria) [TaxId:6100] from d.22.1.1 automated matches: