Lineage for Species: Jellyfish (Aequorea victoria) [TaxId: 6100]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164731Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2164732Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2164733Family d.22.1.1: Fluorescent proteins [54512] (6 protein domains)
  6. 2165015Protein automated matches [190406] (19 species)
    not a true protein
  7. 2165183Species Jellyfish (Aequorea victoria) [TaxId:6100] [188134] (52 PDB entries)

PDB entries in Species: Jellyfish (Aequorea victoria) [TaxId: 6100]:

  1. Domain(s) for 1w7s:
    1. 2165218Domain d1w7sa_: 1w7s A: [161907]
      automated match to d1hcjc_
    2. 2165219Domain d1w7sb_: 1w7s B: [161908]
      automated match to d1hcjc_
    3. 2165220Domain d1w7sc_: 1w7s C: [161909]
      automated match to d1hcjc_
    4. 2165221Domain d1w7sd_: 1w7s D: [161910]
      automated match to d1hcjc_
  2. Domain(s) for 1w7t:
    1. 2165222Domain d1w7ta_: 1w7t A: [161911]
      automated match to d1hcjc_
    2. 2165223Domain d1w7tb_: 1w7t B: [161912]
      automated match to d1hcjc_
    3. 2165224Domain d1w7tc_: 1w7t C: [161913]
      automated match to d1hcjc_
    4. 2165225Domain d1w7td_: 1w7t D: [161914]
      automated match to d1hcjc_
  3. Domain(s) for 1w7u:
    1. 2165226Domain d1w7ua_: 1w7u A: [161915]
      automated match to d1hcjc_
    2. 2165227Domain d1w7ub_: 1w7u B: [161916]
      automated match to d1hcjc_
    3. 2165228Domain d1w7uc_: 1w7u C: [161917]
      automated match to d1hcjc_
    4. 2165229Domain d1w7ud_: 1w7u D: [161918]
      automated match to d1hcjc_
  4. Domain(s) for 1yhg:
    1. 2165234Domain d1yhga_: 1yhg A: [162201]
      automated match to d1qyoa_
    2. 2165235Domain d1yhgb_: 1yhg B: [162202]
      automated match to d1qyoa_
  5. Domain(s) for 1yhh:
  6. Domain(s) for 1yhi:
  7. Domain(s) for 1yj2:
  8. Domain(s) for 1yjf:
  9. Domain(s) for 1z1p:
  10. Domain(s) for 1z1q:
  11. Domain(s) for 2b3p:
  12. Domain(s) for 2b3q:
    1. 2165230Domain d2b3qa_: 2b3q A: [162985]
      automated match to d1qyoa_
      complexed with mg
    2. 2165231Domain d2b3qb_: 2b3q B: [162986]
      automated match to d1qyoa_
      complexed with mg
    3. 2165232Domain d2b3qc_: 2b3q C: [162987]
      automated match to d1qyoa_
      complexed with mg
    4. 2165233Domain d2b3qd_: 2b3q D: [162988]
      automated match to d1qyoa_
      complexed with mg
  13. Domain(s) for 2due:
  14. Domain(s) for 2duf:
  15. Domain(s) for 2dug:
  16. Domain(s) for 2duh:
  17. Domain(s) for 2dui:
  18. Domain(s) for 2hqz:
  19. Domain(s) for 2q57:
  20. Domain(s) for 2wsn:
  21. Domain(s) for 2wso:
  22. Domain(s) for 2wur:
  23. Domain(s) for 2y0g:
  24. Domain(s) for 2ydz:
  25. Domain(s) for 2ye0:
  26. Domain(s) for 2ye1:
  27. Domain(s) for 3ed8:
    1. 2165236Domain d3ed8a_: 3ed8 A: [174857]
      automated match to d1qyoa_
    2. 2165237Domain d3ed8b_: 3ed8 B: [174858]
      automated match to d1qyoa_
    3. 2165238Domain d3ed8c_: 3ed8 C: [174859]
      automated match to d1qyoa_
    4. 2165239Domain d3ed8d_: 3ed8 D: [174860]
      automated match to d1qyoa_
    5. 2165240Domain d3ed8e_: 3ed8 E: [174861]
      automated match to d1qyoa_
  28. Domain(s) for 3st2:
    1. 2165209Domain d3st2a_: 3st2 A: [185513]
      automated match to d1huya_
      complexed with po4
    2. 2165210Domain d3st2b_: 3st2 B: [185514]
      automated match to d1huya_
      complexed with po4
    3. 2165211Domain d3st2c_: 3st2 C: [185515]
      automated match to d1huya_
      complexed with po4
  29. Domain(s) for 3st3:
    1. 2165206Domain d3st3a_: 3st3 A: [185516]
      automated match to d1huya_
      complexed with po4
    2. 2165207Domain d3st3b_: 3st3 B: [185517]
      automated match to d1huya_
      complexed with po4
    3. 2165208Domain d3st3c_: 3st3 C: [185518]
      automated match to d1huya_
      complexed with po4
  30. Domain(s) for 3st4:
    1. 2165212Domain d3st4a_: 3st4 A: [185519]
      automated match to d1huya_
      complexed with po4
    2. 2165213Domain d3st4b_: 3st4 B: [185520]
      automated match to d1huya_
      complexed with po4
    3. 2165214Domain d3st4c_: 3st4 C: [185521]
      automated match to d1huya_
      complexed with po4
  31. Domain(s) for 3ztf:
  32. Domain(s) for 4ar7:
  33. Domain(s) for 4as8:
  34. Domain(s) for 4b5y:
  35. Domain(s) for 4bdu:
    1. 2165241Domain d4bdua1: 4bdu A:2-230 [265921]
      Other proteins in same PDB: d4bdua2, d4bdub2, d4bduc2, d4bdud2
      automated match to d4bdud1
    2. 2165242Domain d4bdub1: 4bdu B:2-230 [265923]
      Other proteins in same PDB: d4bdua2, d4bdub2, d4bduc2, d4bdud2
      automated match to d4bdud1
    3. 2165243Domain d4bduc1: 4bdu C:2-230 [265925]
      Other proteins in same PDB: d4bdua2, d4bdub2, d4bduc2, d4bdud2
      automated match to d4bdud1
    4. 2165244Domain d4bdud1: 4bdu D:2-230 [265927]
      Other proteins in same PDB: d4bdua2, d4bdub2, d4bduc2, d4bdud2
      automated match to d3vhta_
  36. Domain(s) for 5b61:
    1. 2292023Domain d5b61b_: 5b61 B: [335324]
      automated match to d3st2a_
    2. 2292024Domain d5b61a_: 5b61 A: [335325]
      automated match to d3st2a_
    3. 2292030Domain d5b61c_: 5b61 C: [335331]
      automated match to d3st2a_
    4. 2292035Domain d5b61d_: 5b61 D: [335336]
      automated match to d3st2a_
    5. 2292143Domain d5b61f_: 5b61 F: [335444]
      automated match to d3st2a_
    6. 2292240Domain d5b61e_: 5b61 E: [335541]
      automated match to d3st2a_
  37. Domain(s) for 5btt:
    1. 2276166Domain d5bttb1: 5btt B:3-231 [319467]
      Other proteins in same PDB: d5btta2, d5bttb2
      automated match to d2b3pa_
      complexed with gol, so4
    2. 2276288Domain d5btta1: 5btt A:3-231 [319589]
      Other proteins in same PDB: d5btta2, d5bttb2
      automated match to d2b3pa_
      complexed with gol, so4
  38. Domain(s) for 5dpj:
    1. 2270150Domain d5dpja_: 5dpj A: [313455]
      automated match to d3st2a_
      mutant
    2. 2270166Domain d5dpjb_: 5dpj B: [313471]
      automated match to d3st2a_
      mutant
    3. 2270243Domain d5dpjd_: 5dpj D: [313548]
      automated match to d3st2a_
      mutant
    4. 2270581Domain d5dpjc_: 5dpj C: [313886]
      automated match to d3st2a_
      mutant
  39. Domain(s) for 5dtx:
  40. Domain(s) for 5dty:
  41. Domain(s) for 5dtz:
    1. 2270270Domain d5dtza1: 5dtz A:3-233 [313575]
      Other proteins in same PDB: d5dtza2, d5dtzb2, d5dtzc2, d5dtzd2
      automated match to d3st3a_
      complexed with peg
    2. 2270276Domain d5dtzd1: 5dtz D:3-232 [313581]
      Other proteins in same PDB: d5dtza2, d5dtzb2, d5dtzc2, d5dtzd2
      automated match to d3st3a_
      complexed with peg
    3. 2270364Domain d5dtzb1: 5dtz B:3-232 [313669]
      Other proteins in same PDB: d5dtza2, d5dtzb2, d5dtzc2, d5dtzd2
      automated match to d3st3a_
      complexed with peg
    4. 2270389Domain d5dtzc1: 5dtz C:3-232 [313694]
      Other proteins in same PDB: d5dtza2, d5dtzb2, d5dtzc2, d5dtzd2
      automated match to d3st3a_
      complexed with peg
  42. Domain(s) for 5du0:
    1. 2270186Domain d5du0a_: 5du0 A: [313491]
      automated match to d3st3a_
    2. 2270215Domain d5du0b_: 5du0 B: [313520]
      automated match to d3st3a_
    3. 2270217Domain d5du0c_: 5du0 C: [313522]
      automated match to d3st3a_
    4. 2270218Domain d5du0d_: 5du0 D: [313523]
      automated match to d3st3a_
  43. Domain(s) for 5dy6:
    1. 2276169Domain d5dy6a_: 5dy6 A: [319470]
      automated match to d2b3pa_
      complexed with so4
    2. 2276226Domain d5dy6b_: 5dy6 B: [319527]
      automated match to d2b3pa_
      complexed with so4
  44. Domain(s) for 5hbd:
  45. Domain(s) for 5hge:
  46. Domain(s) for 5hw9:
  47. Domain(s) for 5j2o:
  48. Domain(s) for 5ox8:
  49. Domain(s) for 5ox9:
  50. Domain(s) for 5oxa:
  51. Domain(s) for 5oxb:
  52. Domain(s) for 5t3i:

More info for Species Jellyfish (Aequorea victoria) [TaxId:6100] from d.22.1.1 automated matches

Timeline for Species Jellyfish (Aequorea victoria) [TaxId:6100] from d.22.1.1 automated matches: