Lineage for Species: Human immunodeficiency virus [TaxId: 12721]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2058814Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2058815Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2058816Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 protein domains)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 2060049Protein automated matches [190433] (11 species)
    not a true protein
  7. 2060148Species Human immunodeficiency virus [TaxId:12721] [188065] (13 PDB entries)

PDB entries in Species: Human immunodeficiency virus [TaxId: 12721]:

  1. Domain(s) for 1w5x:
  2. Domain(s) for 4a4q:
    1. 2060164Domain d4a4qa_: 4a4q A: [192830]
      automated match to d2xyfa_
      complexed with ux9
    2. 2060165Domain d4a4qb_: 4a4q B: [192527]
      automated match to d2xyfa_
      complexed with ux9
  3. Domain(s) for 4a6b:
    1. 2060155Domain d4a6ba_: 4a6b A: [192228]
      automated match to d2wl0a_
      complexed with qg8
    2. 2060156Domain d4a6bb_: 4a6b B: [192229]
      automated match to d2wl0a_
      complexed with qg8
  4. Domain(s) for 4a6c:
    1. 2060149Domain d4a6ca_: 4a6c A: [192230]
      automated match to d2wl0a_
      complexed with qg9
    2. 2060150Domain d4a6cb_: 4a6c B: [192231]
      automated match to d2wl0a_
      complexed with qg9
  5. Domain(s) for 4coe:
    1. 2060170Domain d4coea_: 4coe A: [261497]
      automated match to d2xyfa_
      complexed with cl, m17
    2. 2060171Domain d4coeb_: 4coe B: [261494]
      automated match to d2xyfa_
      complexed with cl, m17
  6. Domain(s) for 4cp7:
    1. 2060162Domain d4cp7a_: 4cp7 A: [261495]
      automated match to d2xyfa_
      complexed with 9mw, cl
    2. 2060163Domain d4cp7b_: 4cp7 B: [261496]
      automated match to d2xyfa_
      complexed with 9mw, cl
  7. Domain(s) for 4cpq:
    1. 2060172Domain d4cpqa_: 4cpq A: [261765]
      automated match to d2xyfa_
      complexed with 9mw, cl
    2. 2060173Domain d4cpqb_: 4cpq B: [261767]
      automated match to d2xyfa_
      complexed with 9mw, cl
  8. Domain(s) for 4cpr:
    1. 2060160Domain d4cpra_: 4cpr A: [261761]
      automated match to d2xyfa_
      complexed with 378, cl
    2. 2060161Domain d4cprb_: 4cpr B: [261762]
      automated match to d2xyfa_
      complexed with 378, cl
  9. Domain(s) for 4cps:
    1. 2060151Domain d4cpsa_: 4cps A: [261755]
      automated match to d2xyfa_
      complexed with 1t8, cl
    2. 2060152Domain d4cpsb_: 4cps B: [261756]
      automated match to d2xyfa_
      complexed with 1t8, cl
  10. Domain(s) for 4cpt:
    1. 2060157Domain d4cpta_: 4cpt A: [261764]
      automated match to d2xyfa_
      complexed with 1t8, cl
    2. 2060158Domain d4cptb_: 4cpt B: [261760]
      automated match to d2xyfa_
      complexed with 1t8, cl
  11. Domain(s) for 4cpu:
    1. 2060166Domain d4cpua_: 4cpu A: [261759]
      automated match to d2xyfa_
      complexed with cl, v78
    2. 2060167Domain d4cpub_: 4cpu B: [261766]
      automated match to d2xyfa_
      complexed with cl, v78
  12. Domain(s) for 4cpw:
    1. 2060153Domain d4cpwa_: 4cpw A: [261758]
      automated match to d2xyfa_
      complexed with cl, v78
    2. 2060154Domain d4cpwb_: 4cpw B: [261757]
      automated match to d2xyfa_
      complexed with cl, v78
  13. Domain(s) for 4cpx:
    1. 2060168Domain d4cpxa_: 4cpx A: [261768]
      automated match to d2xyfa_
      complexed with cl, v78
    2. 2060169Domain d4cpxb_: 4cpx B: [261763]
      automated match to d2xyfa_
      complexed with cl, v78

More info for Species Human immunodeficiency virus [TaxId:12721] from b.50.1.1 automated matches

Timeline for Species Human immunodeficiency virus [TaxId:12721] from b.50.1.1 automated matches: