Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2115321Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
    3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456
  4. 2115322Superfamily c.42.1: Arginase/deacetylase [52768] (3 families) (S)
  5. 2115600Family c.42.1.2: Histone deacetylase, HDAC [52773] (4 protein domains)
    automatically mapped to Pfam PF00850
  6. 2115643Protein automated matches [190786] (1 species)
    not a true protein
  7. 2115644Species Human (Homo sapiens) [TaxId:9606] [188039] (33 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2v5w:
    1. 2115649Domain d2v5wa_: 2v5w A: [168357]
      automated match to d1t64a_
      complexed with k, zn
    2. 2115650Domain d2v5wb_: 2v5w B: [168358]
      automated match to d1t64a_
      complexed with k, zn
  2. Domain(s) for 2v5x:
    1. 2115660Domain d2v5xa_: 2v5x A: [168359]
      automated match to d1t64a_
      complexed with k, v5x, zn
    2. 2115661Domain d2v5xb_: 2v5x B: [168360]
      automated match to d1t64a_
      complexed with k, v5x, zn
  3. Domain(s) for 3ew8:
  4. Domain(s) for 3ewf:
    1. 2115662Domain d3ewfa_: 3ewf A: [175276]
      automated match to d1t64a_
      complexed with k, mcm, zn
    2. 2115663Domain d3ewfb_: 3ewf B: [175277]
      automated match to d1t64a_
      complexed with k, mcm, zn
    3. 2115664Domain d3ewfc_: 3ewf C: [175278]
      automated match to d1t64a_
      complexed with k, mcm, zn
    4. 2115665Domain d3ewfd_: 3ewf D: [175279]
      automated match to d1t64a_
      complexed with k, mcm, zn
  5. Domain(s) for 3ezp:
    1. 2115678Domain d3ezpa_: 3ezp A: [175330]
      automated match to d1t64a_
      complexed with b3n, bme, k, zn
    2. 2115679Domain d3ezpb_: 3ezp B: [175331]
      automated match to d1t64a_
      complexed with b3n, bme, k, zn
  6. Domain(s) for 3ezt:
    1. 2115680Domain d3ezta_: 3ezt A: [175343]
      automated match to d1t64a_
      complexed with b3n, bme, k, zn
    2. 2115681Domain d3eztb_: 3ezt B: [175344]
      automated match to d1t64a_
      complexed with b3n, bme, k, zn
  7. Domain(s) for 3f06:
    1. 2115674Domain d3f06a_: 3f06 A: [175373]
      automated match to d1t64a_
      complexed with b3n, bme, k, zn
    2. 2115675Domain d3f06b_: 3f06 B: [175374]
      automated match to d1t64a_
      complexed with b3n, bme, k, zn
  8. Domain(s) for 3f0r:
    1. 2115669Domain d3f0ra1: 3f0r A:13-377 [175379]
      Other proteins in same PDB: d3f0ra2, d3f0rb2
      automated match to d1t64a_
      complexed with k, tsn, zn
    2. 2115670Domain d3f0rb1: 3f0r B:13-377 [175380]
      Other proteins in same PDB: d3f0ra2, d3f0rb2
      automated match to d1t64a_
      complexed with k, tsn, zn
    3. 2115671Domain d3f0rc_: 3f0r C: [175381]
      Other proteins in same PDB: d3f0ra2, d3f0rb2
      automated match to d1t64a_
      complexed with k, tsn, zn
  9. Domain(s) for 3mz4:
    1. 2115646Domain d3mz4a1: 3mz4 A:14-377 [181722]
      Other proteins in same PDB: d3mz4a2, d3mz4b2
      automated match to d1t64a_
      complexed with b3n, gol, k, mn
    2. 2115647Domain d3mz4b1: 3mz4 B:14-377 [181723]
      Other proteins in same PDB: d3mz4a2, d3mz4b2
      automated match to d1t64a_
      complexed with b3n, gol, k, mn
  10. Domain(s) for 3mz6:
  11. Domain(s) for 3mz7:
  12. Domain(s) for 3sff:
  13. Domain(s) for 3sfh:
  14. Domain(s) for 4cbt:
    1. 2115690Domain d4cbta1: 4cbt A:650-1033 [251359]
      Other proteins in same PDB: d4cbta2, d4cbtc2, d4cbtc3
      automated match to d4cbyd_
      complexed with 9f4, zn
    2. 2115691Domain d4cbtb_: 4cbt B: [251360]
      Other proteins in same PDB: d4cbta2, d4cbtc2, d4cbtc3
      automated match to d4cbyd_
      complexed with 9f4, zn
    3. 2115692Domain d4cbtc1: 4cbt C:648-1033 [251361]
      Other proteins in same PDB: d4cbta2, d4cbtc2, d4cbtc3
      automated match to d4cbyd_
      complexed with 9f4, zn
  15. Domain(s) for 4cby:
    1. 2115686Domain d4cbya_: 4cby A: [229566]
      Other proteins in same PDB: d4cbyd2
      automated match to d3c0ya1
      complexed with kee, na, zn
    2. 2115687Domain d4cbyb_: 4cby B: [234298]
      Other proteins in same PDB: d4cbyd2
      automated match to d4cbya_
      complexed with kee, na, zn
    3. 2115688Domain d4cbyc_: 4cby C: [234299]
      Other proteins in same PDB: d4cbyd2
      automated match to d4cbya_
      complexed with kee, na, zn
    4. 2115689Domain d4cbyd1: 4cby D:653-1033 [234300]
      Other proteins in same PDB: d4cbyd2
      automated match to d4cbya_
      complexed with kee, na, zn
  16. Domain(s) for 4qa0:
    1. 2115666Domain d4qa0a1: 4qa0 A:14-377 [258786]
      Other proteins in same PDB: d4qa0a2
      automated match to d2v5wb_
      complexed with gol, k, shh, zn
    2. 2115667Domain d4qa0b_: 4qa0 B: [258788]
      Other proteins in same PDB: d4qa0a2
      automated match to d2v5wb_
      complexed with gol, k, shh, zn
  17. Domain(s) for 4qa1:
    1. 2115653Domain d4qa1a_: 4qa1 A: [258795]
      Other proteins in same PDB: d4qa1b2, d4qa1d2
      automated match to d2v5wb_
      complexed with b3n, gol, k, zn
    2. 2115654Domain d4qa1b1: 4qa1 B:14-377 [258791]
      Other proteins in same PDB: d4qa1b2, d4qa1d2
      automated match to d2v5wb_
      complexed with b3n, gol, k, zn
    3. 2115655Domain d4qa1c_: 4qa1 C: [258793]
      Other proteins in same PDB: d4qa1b2, d4qa1d2
      automated match to d2v5wb_
      complexed with b3n, gol, k, zn
    4. 2115656Domain d4qa1d1: 4qa1 D:14-377 [258792]
      Other proteins in same PDB: d4qa1b2, d4qa1d2
      automated match to d2v5wb_
      complexed with b3n, gol, k, zn
  18. Domain(s) for 4qa2:
    1. 2115672Domain d4qa2a1: 4qa2 A:14-377 [258790]
      Other proteins in same PDB: d4qa2a2, d4qa2b2
      automated match to d2v5wb_
      complexed with gol, k, shh, zn
    2. 2115673Domain d4qa2b1: 4qa2 B:14-377 [258787]
      Other proteins in same PDB: d4qa2a2, d4qa2b2
      automated match to d2v5wb_
      complexed with gol, k, shh, zn
  19. Domain(s) for 4qa3:
    1. 2115684Domain d4qa3a1: 4qa3 A:14-377 [258794]
      Other proteins in same PDB: d4qa3a2
      automated match to d2v5wb_
      complexed with gol, k, tsn, zn
    2. 2115685Domain d4qa3b_: 4qa3 B: [258796]
      Other proteins in same PDB: d4qa3a2
      automated match to d2v5wb_
      complexed with gol, k, tsn, zn
  20. Domain(s) for 4qa4:
  21. Domain(s) for 4rn0:
    1. 2115658Domain d4rn0a1: 4rn0 A:14-377 [271228]
      Other proteins in same PDB: d4rn0a2, d4rn0b2
      automated match to d4qa0a_
      complexed with gol, imd, k, l6g, zn
    2. 2115659Domain d4rn0b1: 4rn0 B:14-377 [271227]
      Other proteins in same PDB: d4rn0a2, d4rn0b2
      automated match to d4qa0a_
      complexed with gol, imd, k, l6g, zn
  22. Domain(s) for 4rn1:
    1. 2115676Domain d4rn1a1: 4rn1 A:14-377 [271226]
      Other proteins in same PDB: d4rn1a2
      automated match to d4qa0a_
      complexed with gol, imd, k, l8g, zn
    2. 2115677Domain d4rn1b_: 4rn1 B: [271229]
      Other proteins in same PDB: d4rn1a2
      automated match to d4qa0a_
      complexed with gol, imd, k, l8g, zn
  23. Domain(s) for 4rn2:
    1. 2115682Domain d4rn2a_: 4rn2 A: [271224]
      automated match to d4qa0a_
      complexed with k, l7g, zn
    2. 2115683Domain d4rn2b_: 4rn2 B: [271225]
      automated match to d4qa0a_
      complexed with k, l7g, zn
  24. Domain(s) for 5a2s:
    1. 2269741Domain d5a2sb_: 5a2s B: [313046]
      automated match to d4cbtb_
      complexed with na, otf, zn
    2. 2269781Domain d5a2sa_: 5a2s A: [313086]
      automated match to d4cbtb_
      complexed with na, otf, zn
  25. Domain(s) for 5bwz:
    1. 2274772Domain d5bwza1: 5bwz A:14-377 [318073]
      Other proteins in same PDB: d5bwza2
      automated match to d2v5wb_
      complexed with gol, k, xch, zn
    2. 2274836Domain d5bwzb_: 5bwz B: [318137]
      Other proteins in same PDB: d5bwza2
      automated match to d2v5wb_
      complexed with gol, k, xch, zn
  26. Domain(s) for 5d1b:
    1. 2115693Domain d5d1ba_: 5d1b A: [278342]
      Other proteins in same PDB: d5d1bb2
      automated match to d4qa0a_
      complexed with k, tsn, zn
    2. 2115694Domain d5d1bb1: 5d1b B:14-377 [278341]
      Other proteins in same PDB: d5d1bb2
      automated match to d4qa0a_
      complexed with k, tsn, zn
  27. Domain(s) for 5dc5:
    1. 2270066Domain d5dc5a_: 5dc5 A: [313371]
      automated match to d2v5wb_
    2. 2270070Domain d5dc5b_: 5dc5 B: [313375]
      automated match to d2v5wb_
  28. Domain(s) for 5fcw:
    1. 2281132Domain d5fcwb_: 5fcw B: [324433]
      automated match to d2v5wb_
      complexed with 5ya, gol, k, p6g, zn
    2. 2281184Domain d5fcwa_: 5fcw A: [324485]
      automated match to d2v5wb_
      complexed with 5ya, gol, k, p6g, zn
  29. Domain(s) for 5ths:
    1. 2284206Domain d5thsb_: 5ths B: [327507]
      automated match to d2v5wb_
      complexed with b3n, edo, k, zn
    2. 2284216Domain d5thsa_: 5ths A: [327517]
      automated match to d2v5wb_
      complexed with b3n, edo, k, zn
  30. Domain(s) for 5tht:
    1. 2284188Domain d5thtd_: 5tht D: [327489]
      Other proteins in same PDB: d5thta2, d5thtb2
      automated match to d2v5wb_
      complexed with b3n, edo, k, zn
    2. 2284196Domain d5thtb1: 5tht B:15-377 [327497]
      Other proteins in same PDB: d5thta2, d5thtb2
      automated match to d2v5wb_
      complexed with b3n, edo, k, zn
    3. 2284211Domain d5thta1: 5tht A:14-377 [327512]
      Other proteins in same PDB: d5thta2, d5thtb2
      automated match to d2v5wb_
      complexed with b3n, edo, k, zn
    4. 2284243Domain d5thtc_: 5tht C: [327544]
      Other proteins in same PDB: d5thta2, d5thtb2
      automated match to d2v5wb_
      complexed with b3n, edo, k, zn
  31. Domain(s) for 5thu:
    1. 2284189Domain d5thua1: 5thu A:14-377 [327490]
      Other proteins in same PDB: d5thua2
      automated match to d2v5wb_
      complexed with b3n, ggg, k, zn
    2. 2284191Domain d5thub_: 5thu B: [327492]
      Other proteins in same PDB: d5thua2
      automated match to d2v5wb_
      complexed with b3n, ggg, k, zn
  32. Domain(s) for 5thv:
    1. 2284201Domain d5thvb_: 5thv B: [327502]
      automated match to d2v5wb_
      complexed with b3n, edo, k, zn
    2. 2284228Domain d5thva_: 5thv A: [327529]
      automated match to d2v5wb_
      complexed with b3n, edo, k, zn
  33. Domain(s) for 5vi6:

More info for Species Human (Homo sapiens) [TaxId:9606] from c.42.1.2 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from c.42.1.2 automated matches: