SCOPe 2.07: Species: Thermus thermophilus HB8 [TaxId: 300852]

Lineage for Species: Thermus thermophilus HB8 [TaxId: 300852]

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)
Family c.2.1.0: automated matches [191313] (1 protein)
not a true family
Protein automated matches [190069] (309 species)
not a true protein
Species Thermus thermophilus HB8 [TaxId:300852] [187989] (16 PDB entries)

PDB entries in Species: Thermus thermophilus HB8 [TaxId: 300852]:

Domain(s) for 1x1e:
- Domain d1x1ea_: 1x1e A: [162028]
  automated match to d1vl8a_
Domain(s) for 2e37:
1. Domain d2e37a1: 2e37 A:1-141 [204058]
  Other proteins in same PDB: d2e37a2, d2e37b2, d2e37c2, d2e37d2, d2e37e2, d2e37f2, d2e37g2, d2e37h2
  automated match to d1llda1
  complexed with nad, so4
2. Domain d2e37b1: 2e37 B:1-141 [204060]
  Other proteins in same PDB: d2e37a2, d2e37b2, d2e37c2, d2e37d2, d2e37e2, d2e37f2, d2e37g2, d2e37h2
  automated match to d1llda1
  complexed with nad, so4
3. Domain d2e37c1: 2e37 C:1-141 [204062]
  Other proteins in same PDB: d2e37a2, d2e37b2, d2e37c2, d2e37d2, d2e37e2, d2e37f2, d2e37g2, d2e37h2
  automated match to d1llda1
  complexed with nad, so4
4. Domain d2e37d1: 2e37 D:1-141 [204064]
  Other proteins in same PDB: d2e37a2, d2e37b2, d2e37c2, d2e37d2, d2e37e2, d2e37f2, d2e37g2, d2e37h2
  automated match to d1llda1
  complexed with nad, so4
5. Domain d2e37e1: 2e37 E:1-141 [204066]
  Other proteins in same PDB: d2e37a2, d2e37b2, d2e37c2, d2e37d2, d2e37e2, d2e37f2, d2e37g2, d2e37h2
  automated match to d1llda1
  complexed with nad, so4
6. Domain d2e37f1: 2e37 F:1-141 [204068]
  Other proteins in same PDB: d2e37a2, d2e37b2, d2e37c2, d2e37d2, d2e37e2, d2e37f2, d2e37g2, d2e37h2
  automated match to d1llda1
  complexed with nad, so4
7. Domain d2e37g1: 2e37 G:1-141 [204070]
  Other proteins in same PDB: d2e37a2, d2e37b2, d2e37c2, d2e37d2, d2e37e2, d2e37f2, d2e37g2, d2e37h2
  automated match to d1llda1
  complexed with nad, so4
8. Domain d2e37h1: 2e37 H:1-141 [204072]
  Other proteins in same PDB: d2e37a2, d2e37b2, d2e37c2, d2e37d2, d2e37e2, d2e37f2, d2e37g2, d2e37h2
  automated match to d1llda1
  complexed with nad, so4
Domain(s) for 2ehd:
1. Domain d2ehda_: 2ehd A: [164028]
  automated match to d2bd0a1
  complexed with co
2. Domain d2ehdb_: 2ehd B: [164029]
  automated match to d2bd0a1
  complexed with co
Domain(s) for 2ekp:
- Domain d2ekpa_: 2ekp A: [164134]
  automated match to d1vl8a_
  complexed with gol, nad
Domain(s) for 2ekq:
1. Domain d2ekqa_: 2ekq A: [164135]
  automated match to d1vl8a_
  complexed with gol, so4
2. Domain d2ekqb_: 2ekq B: [164136]
  automated match to d1vl8a_
  complexed with gol, so4
3. Domain d2ekqc_: 2ekq C: [164137]
  automated match to d1vl8a_
  complexed with gol, so4
4. Domain d2ekqd_: 2ekq D: [164138]
  automated match to d1vl8a_
  complexed with gol, so4
Domain(s) for 2p5u:
1. Domain d2p5ua_: 2p5u A: [198231]
  automated match to d2p5ud_
  complexed with nad
2. Domain d2p5ub_: 2p5u B: [198232]
  automated match to d2p5ud_
  complexed with nad
3. Domain d2p5uc_: 2p5u C: [198233]
  automated match to d2p5ud_
  complexed with nad
4. Domain d2p5ud_: 2p5u D: [193892]
  automated match to d3ko8a_
  complexed with nad
Domain(s) for 2p5y:
- Domain d2p5ya_: 2p5y A: [193893]
  automated match to d3ko8a_
  complexed with nad
Domain(s) for 2ph3:
1. Domain d2ph3a_: 2ph3 A: [167185]
  automated match to d1i01a_
2. Domain d2ph3b_: 2ph3 B: [167186]
  automated match to d1i01a_
Domain(s) for 2v6m:
1. Domain d2v6ma1: 2v6m A:22-164 [206251]
  Other proteins in same PDB: d2v6ma2, d2v6mb2, d2v6mc2, d2v6md2
  automated match to d1llda1
  complexed with mes
2. Domain d2v6mb1: 2v6m B:22-164 [206253]
  Other proteins in same PDB: d2v6ma2, d2v6mb2, d2v6mc2, d2v6md2
  automated match to d1llda1
  complexed with mes
3. Domain d2v6mc1: 2v6m C:22-164 [206255]
  Other proteins in same PDB: d2v6ma2, d2v6mb2, d2v6mc2, d2v6md2
  automated match to d1llda1
  complexed with mes
4. Domain d2v6md1: 2v6m D:22-164 [206257]
  Other proteins in same PDB: d2v6ma2, d2v6mb2, d2v6mc2, d2v6md2
  automated match to d1llda1
  complexed with mes
Domain(s) for 2v7p:
1. Domain d2v7pa1: 2v7p A:22-164 [206261]
  Other proteins in same PDB: d2v7pa2, d2v7pb2, d2v7pc2, d2v7pd2
  automated match to d1llda1
  complexed with nad, oxm
2. Domain d2v7pb1: 2v7p B:22-164 [206263]
  Other proteins in same PDB: d2v7pa2, d2v7pb2, d2v7pc2, d2v7pd2
  automated match to d1llda1
  complexed with nad, oxm
3. Domain d2v7pc1: 2v7p C:22-164 [206265]
  Other proteins in same PDB: d2v7pa2, d2v7pb2, d2v7pc2, d2v7pd2
  automated match to d1llda1
  complexed with nad, oxm
4. Domain d2v7pd1: 2v7p D:22-164 [206267]
  Other proteins in same PDB: d2v7pa2, d2v7pb2, d2v7pc2, d2v7pd2
  automated match to d1llda1
  complexed with nad, oxm
Domain(s) for 2xxb:
1. Domain d2xxba1: 2xxb A:22-164 [207396]
  Other proteins in same PDB: d2xxba2, d2xxbb2
  automated match to d1llda1
  complexed with amp; mutant
2. Domain d2xxbb1: 2xxb B:22-164 [207398]
  Other proteins in same PDB: d2xxba2, d2xxbb2
  automated match to d1llda1
  complexed with amp; mutant
Domain(s) for 2xxj:
1. Domain d2xxja1: 2xxj A:1-141 [207408]
  Other proteins in same PDB: d2xxja2, d2xxjb2, d2xxjc2, d2xxjd2
  automated match to d1llda1
  complexed with nad, oxm, so4; mutant
2. Domain d2xxjb1: 2xxj B:1-141 [207410]
  Other proteins in same PDB: d2xxja2, d2xxjb2, d2xxjc2, d2xxjd2
  automated match to d1llda1
  complexed with nad, oxm, so4; mutant
3. Domain d2xxjc1: 2xxj C:1-141 [207412]
  Other proteins in same PDB: d2xxja2, d2xxjb2, d2xxjc2, d2xxjd2
  automated match to d1llda1
  complexed with nad, oxm, so4; mutant
4. Domain d2xxjd1: 2xxj D:1-141 [207414]
  Other proteins in same PDB: d2xxja2, d2xxjb2, d2xxjc2, d2xxjd2
  automated match to d1llda1
  complexed with nad, oxm, so4; mutant
Domain(s) for 3zzn:
1. Domain d3zzna1: 3zzn A:22-164 [218609]
  Other proteins in same PDB: d3zzna2, d3zznb2, d3zznc2, d3zznd2
  automated match to d1llda1
  complexed with adp; mutant
2. Domain d3zznb1: 3zzn B:22-164 [218611]
  Other proteins in same PDB: d3zzna2, d3zznb2, d3zznc2, d3zznd2
  automated match to d1llda1
  complexed with adp; mutant
3. Domain d3zznc1: 3zzn C:22-164 [218613]
  Other proteins in same PDB: d3zzna2, d3zznb2, d3zznc2, d3zznd2
  automated match to d1llda1
  complexed with adp; mutant
4. Domain d3zznd1: 3zzn D:22-164 [218615]
  Other proteins in same PDB: d3zzna2, d3zznb2, d3zznc2, d3zznd2
  automated match to d1llda1
  complexed with adp; mutant
Domain(s) for 4a73:
1. Domain d4a73a1: 4a73 A:22-164 [250955]
  Other proteins in same PDB: d4a73a2, d4a73b2, d4a73c2, d4a73d2
  automated match to d2v7pa1
  mutant
2. Domain d4a73b1: 4a73 B:22-164 [250957]
  Other proteins in same PDB: d4a73a2, d4a73b2, d4a73c2, d4a73d2
  automated match to d2v7pa1
  mutant
3. Domain d4a73c1: 4a73 C:22-164 [250959]
  Other proteins in same PDB: d4a73a2, d4a73b2, d4a73c2, d4a73d2
  automated match to d2v7pa1
  mutant
4. Domain d4a73d1: 4a73 D:22-164 [250961]
  Other proteins in same PDB: d4a73a2, d4a73b2, d4a73c2, d4a73d2
  automated match to d2v7pa1
  mutant
Domain(s) for 4jp2:
- Domain d4jp2a_: 4jp2 A: [237822]
  automated match to d1x1ea_
Domain(s) for 4jp3:
- Domain d4jp3a_: 4jp3 A: [237823]
  automated match to d1x1ea_
  complexed with cit

More info for Species Thermus thermophilus HB8 [TaxId:300852] from c.2.1.0 automated matches

Timeline for Species Thermus thermophilus HB8 [TaxId:300852] from c.2.1.0 automated matches:

Species Thermus thermophilus HB8 [TaxId:300852] from c.2.1.0 automated matches first appeared in SCOPe 2.01, called Species Thermus thermophilus [TaxId:300852] from c.2.1.0 automated matches
Species Thermus thermophilus HB8 [TaxId:300852] from c.2.1.0 automated matches appears in SCOPe 2.06
Species Thermus thermophilus HB8 [TaxId:300852] from c.2.1.0 automated matches appears in the current release, SCOPe 2.08