Lineage for Species: Hiv-1 m:b_arv2/sf2 [TaxId: 11685]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2058814Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2058815Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2058816Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 protein domains)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 2058832Protein Human immunodeficiency virus type 1 protease [50632] (9 species)
  7. 2058833Species Hiv-1 m:b_arv2/sf2 [TaxId:11685] [187932] (17 PDB entries)

PDB entries in Species: Hiv-1 m:b_arv2/sf2 [TaxId: 11685]:

  1. Domain(s) for 2nxd:
    1. 2058856Domain d2nxda_: 2nxd A: [166411]
      automated match to d1f7aa_
    2. 2058857Domain d2nxdb_: 2nxd B: [166412]
      automated match to d1f7aa_
  2. Domain(s) for 2nxm:
    1. 2058872Domain d2nxma_: 2nxm A: [166441]
      automated match to d1f7aa_
    2. 2058873Domain d2nxmb_: 2nxm B: [166442]
      automated match to d1f7aa_
  3. Domain(s) for 3ekp:
    1. 2058864Domain d3ekpa_: 3ekp A: [175021]
      automated match to d1mt7a_
      complexed with 478, act, po4
    2. 2058865Domain d3ekpb_: 3ekp B: [175022]
      automated match to d1mt7a_
      complexed with 478, act, po4
    3. 2058866Domain d3ekpc_: 3ekp C: [175023]
      automated match to d1mt7a_
      complexed with 478, act, po4
    4. 2058867Domain d3ekpd_: 3ekp D: [175024]
      automated match to d1mt7a_
      complexed with 478, act, po4
  4. Domain(s) for 3ekt:
    1. 2058850Domain d3ekta_: 3ekt A: [175029]
      automated match to d1mt7a_
      complexed with 017, act, po4
    2. 2058851Domain d3ektb_: 3ekt B: [175030]
      automated match to d1mt7a_
      complexed with 017, act, po4
    3. 2058852Domain d3ektc_: 3ekt C: [175031]
      automated match to d1mt7a_
      complexed with 017, act, po4
    4. 2058853Domain d3ektd_: 3ekt D: [175032]
      automated match to d1mt7a_
      complexed with 017, act, po4
  5. Domain(s) for 3ekv:
    1. 2058842Domain d3ekva_: 3ekv A: [175033]
      automated match to d1kzka_
      complexed with 478, act
    2. 2058843Domain d3ekvb_: 3ekv B: [175034]
      automated match to d1kzka_
      complexed with 478, act
  6. Domain(s) for 3ekw:
    1. 2058834Domain d3ekwa_: 3ekw A: [175035]
      automated match to d1mt7a_
      complexed with dr7, po4
    2. 2058835Domain d3ekwb_: 3ekw B: [175036]
      automated match to d1mt7a_
      complexed with dr7, po4
  7. Domain(s) for 3ekx:
    1. 2058848Domain d3ekxa_: 3ekx A: [175037]
      automated match to d1kzka_
      complexed with 1un, act
    2. 2058849Domain d3ekxb_: 3ekx B: [175038]
      automated match to d1kzka_
      complexed with 1un, act
  8. Domain(s) for 3eky:
    1. 2058840Domain d3ekya_: 3eky A: [175039]
      automated match to d1kzka_
      complexed with dr7, po4
    2. 2058841Domain d3ekyb_: 3eky B: [175040]
      automated match to d1kzka_
      complexed with dr7, po4
  9. Domain(s) for 3el0:
    1. 2058854Domain d3el0a_: 3el0 A: [175041]
      automated match to d1mt7a_
      complexed with 1un, act, po4
    2. 2058855Domain d3el0b_: 3el0 B: [175042]
      automated match to d1mt7a_
      complexed with 1un, act, po4
  10. Domain(s) for 3el1:
    1. 2058838Domain d3el1a_: 3el1 A: [175043]
      automated match to d1kzka_
      complexed with act, dr7
    2. 2058839Domain d3el1b_: 3el1 B: [175044]
      automated match to d1kzka_
      complexed with act, dr7
  11. Domain(s) for 3el5:
    1. 2058836Domain d3el5a_: 3el5 A: [175047]
      automated match to d1k6ca_
      complexed with 1un, act
    2. 2058837Domain d3el5b_: 3el5 B: [175048]
      automated match to d1k6ca_
      complexed with 1un, act
  12. Domain(s) for 3lzv:
    1. 2058862Domain d3lzva_: 3lzv A: [180673]
      automated match to d1kzka_
      complexed with 017, act, po4
    2. 2058863Domain d3lzvb_: 3lzv B: [180674]
      automated match to d1kzka_
      complexed with 017, act, po4
  13. Domain(s) for 3mxd:
    1. 2058846Domain d3mxda_: 3mxd A: [181661]
      automated match to d1kzka_
      complexed with act, k53, po4
    2. 2058847Domain d3mxdb_: 3mxd B: [181662]
      automated match to d1kzka_
      complexed with act, k53, po4
  14. Domain(s) for 3mxe:
    1. 2058844Domain d3mxea_: 3mxe A: [181663]
      automated match to d1kzka_
      complexed with act, k54, po4
    2. 2058845Domain d3mxeb_: 3mxe B: [181664]
      automated match to d1kzka_
      complexed with act, k54, po4
  15. Domain(s) for 3oxv:
    1. 2058868Domain d3oxva_: 3oxv A: [191804]
      automated match to d3oxvd_
      complexed with 478, act, gol, po4, so4
    2. 2058869Domain d3oxvb_: 3oxv B: [191805]
      automated match to d3oxvd_
      complexed with 478, act, gol, po4, so4
    3. 2058870Domain d3oxvc_: 3oxv C: [191806]
      automated match to d3oxvd_
      complexed with 478, act, gol, po4, so4
    4. 2058871Domain d3oxvd_: 3oxv D: [183390]
      automated match to d1kzka_
      complexed with 478, act, gol, po4, so4
  16. Domain(s) for 3oxw:
    1. 2058874Domain d3oxwa_: 3oxw A: [183391]
      automated match to d1kzka_
      complexed with 017, act, edo, gol, po4
    2. 2058875Domain d3oxwb_: 3oxw B: [183392]
      automated match to d1kzka_
      complexed with 017, act, edo, gol, po4
    3. 2058876Domain d3oxwc_: 3oxw C: [183393]
      automated match to d1kzka_
      complexed with 017, act, edo, gol, po4
    4. 2058877Domain d3oxwd_: 3oxw D: [183394]
      automated match to d1kzka_
      complexed with 017, act, edo, gol, po4
  17. Domain(s) for 3oxx:
    1. 2058858Domain d3oxxa_: 3oxx A: [183395]
      automated match to d1kzka_
      complexed with act, dr7, edo, gol, po4
    2. 2058859Domain d3oxxb_: 3oxx B: [183396]
      automated match to d1kzka_
      complexed with act, dr7, edo, gol, po4
    3. 2058860Domain d3oxxc_: 3oxx C: [183397]
      automated match to d1kzka_
      complexed with act, dr7, edo, gol, po4
    4. 2058861Domain d3oxxd_: 3oxx D: [183398]
      automated match to d1kzka_
      complexed with act, dr7, edo, gol, po4

More info for Species Hiv-1 m:b_arv2/sf2 [TaxId:11685] from b.50.1.1 Human immunodeficiency virus type 1 protease

Timeline for Species Hiv-1 m:b_arv2/sf2 [TaxId:11685] from b.50.1.1 Human immunodeficiency virus type 1 protease: