Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. Family b.60.1.0: automated matches [191454] (1 protein)
    not a true family
  6. Protein automated matches [190698] (25 species)
    not a true protein
  7. Species Human (Homo sapiens) [TaxId:9606] [187833] (51 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2hzq:
  2. Domain(s) for 2hzr:
  3. Domain(s) for 2wwp:
    1. Domain d2wwpa_: 2wwp A: [207056]
      automated match to d4imna_
      complexed with cl, scn
    2. Domain d2wwpb_: 2wwp B: [207057]
      automated match to d4imna_
      complexed with cl, scn
  4. Domain(s) for 2xst:
  5. Domain(s) for 3ia8:
    1. Domain d3ia8a_: 3ia8 A: [178204]
      automated match to d2a13a1
      complexed with hem
    2. Domain d3ia8b_: 3ia8 B: [178205]
      automated match to d2a13a1
      complexed with hem
  6. Domain(s) for 3nr3:
  7. Domain(s) for 3o19:
  8. Domain(s) for 3o22:
  9. Domain(s) for 3o2y:
    1. Domain d3o2ya_: 3o2y A: [214132]
      automated match to d2a2ua_
      complexed with gol, ola, plm
    2. Domain d3o2yb_: 3o2y B: [214133]
      automated match to d2a2ua_
      complexed with gol, ola, plm
  10. Domain(s) for 3qkg:
  11. Domain(s) for 4a60:
  12. Domain(s) for 4es7:
  13. Domain(s) for 4imn:
  14. Domain(s) for 4imo:
  15. Domain(s) for 4orr:
  16. Domain(s) for 4ors:
    1. Domain d4orsa_: 4ors A: [258703]
      automated match to d2k23a_
      complexed with so4; mutant
    2. Domain d4orsb_: 4ors B: [258707]
      automated match to d2k23a_
      complexed with so4; mutant
  17. Domain(s) for 4oru:
    1. Domain d4orua_: 4oru A: [258705]
      automated match to d2k23a_
      complexed with peu; mutant
    2. Domain d4orub_: 4oru B: [258706]
      automated match to d2k23a_
      complexed with peu; mutant
  18. Domain(s) for 4orw:
    1. Domain d4orwa_: 4orw A: [258701]
      automated match to d2k23a_
      mutant
    2. Domain d4orwb_: 4orw B: [258702]
      automated match to d2k23a_
      mutant
  19. Domain(s) for 4orx:
    1. Domain d4orxa_: 4orx A: [258964]
      automated match to d2k23a_
      complexed with peu, so4; mutant
    2. Domain d4orxb_: 4orx B: [260213]
      automated match to d2k23a_
      complexed with peu, so4; mutant
  20. Domain(s) for 4ory:
    1. Domain d4orya_: 4ory A: [263337]
      automated match to d2k23a_
      complexed with peu; mutant
    2. Domain d4oryb_: 4ory B: [261858]
      automated match to d2k23a_
      complexed with peu; mutant
    3. Domain d4oryc_: 4ory C: [261856]
      automated match to d2k23a_
      complexed with peu; mutant
    4. Domain d4oryd_: 4ory D: [263338]
      automated match to d2k23a_
      complexed with peu; mutant
    5. Domain d4orye_: 4ory E: [263339]
      automated match to d2k23a_
      complexed with peu; mutant
    6. Domain d4oryf_: 4ory F: [261857]
      automated match to d2k23a_
      complexed with peu; mutant
    7. Domain d4oryg_: 4ory G: [263340]
      automated match to d2k23a_
      complexed with peu; mutant
    8. Domain d4oryh_: 4ory H: [263341]
      automated match to d2k23a_
      complexed with peu; mutant
  21. Domain(s) for 4os0:
    1. Domain d4os0a_: 4os0 A: [258708]
      automated match to d2k23a_
      mutant
    2. Domain d4os0b_: 4os0 B: [258709]
      automated match to d2k23a_
      mutant
  22. Domain(s) for 4os3:
    1. Domain d4os3a_: 4os3 A: [258712]
      automated match to d2k23a_
      mutant
    2. Domain d4os3b_: 4os3 B: [258711]
      automated match to d2k23a_
      mutant
  23. Domain(s) for 4os8:
    1. Domain d4os8a_: 4os8 A: [258710]
      automated match to d2k23a_
      mutant
    2. Domain d4os8b_: 4os8 B: [258713]
      automated match to d2k23a_
      mutant
  24. Domain(s) for 4r0b:
  25. Domain(s) for 4run:
    1. Domain d4runa1: 4run A:8-152 [271232]
      Other proteins in same PDB: d4runa2, d4runb2
      automated match to d2czta_
      complexed with flc
    2. Domain d4runb1: 4run B:2-152 [271233]
      Other proteins in same PDB: d4runa2, d4runb2
      automated match to d2czta_
      complexed with flc
  26. Domain(s) for 5n4m:
  27. Domain(s) for 5n4p:
  28. Domain(s) for 5n4q:
  29. Domain(s) for 5t43:
  30. Domain(s) for 5wy9:
  31. Domain(s) for 6do6:
  32. Domain(s) for 6do7:
  33. Domain(s) for 6drg:
  34. Domain(s) for 6e5w:
    1. Domain d6e5wa_: 6e5w A: [364821]
      automated match to d1kgla_
      complexed with gol, hvd
    2. Domain d6e5wb_: 6e5w B: [364784]
      automated match to d1kgla_
      complexed with gol, hvd
    3. Domain d6e5wc_: 6e5w C: [364836]
      automated match to d1kgla_
      complexed with gol, hvd
    4. Domain d6e5wd_: 6e5w D: [364830]
      automated match to d1kgla_
      complexed with gol, hvd
  35. Domain(s) for 6ew2:
  36. Domain(s) for 6ew4:
  37. Domain(s) for 6ew5:
    1. Domain d6ew5a1: 6ew5 A:0-131 [354555]
      Other proteins in same PDB: d6ew5a2, d6ew5b2, d6ew5c2, d6ew5d2
      automated match to d1vyfa_
      complexed with plm; mutant
    2. Domain d6ew5b1: 6ew5 B:0-131 [354614]
      Other proteins in same PDB: d6ew5a2, d6ew5b2, d6ew5c2, d6ew5d2
      automated match to d1vyfa_
      complexed with plm; mutant
    3. Domain d6ew5c1: 6ew5 C:0-131 [354582]
      Other proteins in same PDB: d6ew5a2, d6ew5b2, d6ew5c2, d6ew5d2
      automated match to d1vyfa_
      complexed with plm; mutant
    4. Domain d6ew5d1: 6ew5 D:0-131 [354511]
      Other proteins in same PDB: d6ew5a2, d6ew5b2, d6ew5c2, d6ew5d2
      automated match to d1vyfa_
      complexed with plm; mutant
  38. Domain(s) for 6mp4:
    1. Domain d6mp4a1: 6mp4 A:1-127 [376798]
      Other proteins in same PDB: d6mp4a2, d6mp4b2, d6mp4c2, d6mp4d2, d6mp4e2, d6mp4f2, d6mp4g2, d6mp4h2
      automated match to d3pp6a_
      complexed with mli, tci
    2. Domain d6mp4b1: 6mp4 B:1-127 [376739]
      Other proteins in same PDB: d6mp4a2, d6mp4b2, d6mp4c2, d6mp4d2, d6mp4e2, d6mp4f2, d6mp4g2, d6mp4h2
      automated match to d3pp6a_
      complexed with mli, tci
    3. Domain d6mp4c1: 6mp4 C:1-127 [376792]
      Other proteins in same PDB: d6mp4a2, d6mp4b2, d6mp4c2, d6mp4d2, d6mp4e2, d6mp4f2, d6mp4g2, d6mp4h2
      automated match to d3pp6a_
      complexed with mli, tci
    4. Domain d6mp4d1: 6mp4 D:1-127 [376723]
      Other proteins in same PDB: d6mp4a2, d6mp4b2, d6mp4c2, d6mp4d2, d6mp4e2, d6mp4f2, d6mp4g2, d6mp4h2
      automated match to d3pp6a_
      complexed with mli, tci
    5. Domain d6mp4e1: 6mp4 E:1-127 [376734]
      Other proteins in same PDB: d6mp4a2, d6mp4b2, d6mp4c2, d6mp4d2, d6mp4e2, d6mp4f2, d6mp4g2, d6mp4h2
      automated match to d3pp6a_
      complexed with mli, tci
    6. Domain d6mp4f1: 6mp4 F:1-127 [376736]
      Other proteins in same PDB: d6mp4a2, d6mp4b2, d6mp4c2, d6mp4d2, d6mp4e2, d6mp4f2, d6mp4g2, d6mp4h2
      automated match to d3pp6a_
      complexed with mli, tci
    7. Domain d6mp4g1: 6mp4 G:1-127 [376771]
      Other proteins in same PDB: d6mp4a2, d6mp4b2, d6mp4c2, d6mp4d2, d6mp4e2, d6mp4f2, d6mp4g2, d6mp4h2
      automated match to d3pp6a_
      complexed with mli, tci
    8. Domain d6mp4h1: 6mp4 H:1-127 [376780]
      Other proteins in same PDB: d6mp4a2, d6mp4b2, d6mp4c2, d6mp4d2, d6mp4e2, d6mp4f2, d6mp4g2, d6mp4h2
      automated match to d3pp6a_
      complexed with mli, tci
  39. Domain(s) for 6s2m:
  40. Domain(s) for 6s2s:
  41. Domain(s) for 6sts:
    1. Domain d6stsa1: 6sts A:0-131 [383420]
      Other proteins in same PDB: d6stsa2, d6stsb2
      automated match to d1vyfa_
      complexed with plm, so4; mutant
    2. Domain d6stsb1: 6sts B:0-131 [383465]
      Other proteins in same PDB: d6stsa2, d6stsb2
      automated match to d1vyfa_
      complexed with plm, so4; mutant
  42. Domain(s) for 6xu5:
  43. Domain(s) for 6xu9:
  44. Domain(s) for 6xua:
  45. Domain(s) for 6xuw:
  46. Domain(s) for 6xvq:
  47. Domain(s) for 6xvr:
  48. Domain(s) for 6xvs:
    1. Domain d6xvsa1: 6xvs A:0-131 [383521]
      Other proteins in same PDB: d6xvsa2, d6xvsb2
      automated match to d1vyfa_
      complexed with gol; mutant
    2. Domain d6xvsb1: 6xvs B:0-131 [383537]
      Other proteins in same PDB: d6xvsa2, d6xvsb2
      automated match to d1vyfa_
      complexed with gol; mutant
  49. Domain(s) for 6xvy:
    1. Domain d6xvyb1: 6xvy B:0-131 [383509]
      Other proteins in same PDB: d6xvyb2, d6xvyc2, d6xvyd2, d6xvye2
      automated match to d1vyfa_
      complexed with cit, cl, plm; mutant
    2. Domain d6xvyc1: 6xvy C:0-131 [383480]
      Other proteins in same PDB: d6xvyb2, d6xvyc2, d6xvyd2, d6xvye2
      automated match to d1vyfa_
      complexed with cit, cl, plm; mutant
    3. Domain d6xvyd1: 6xvy D:0-131 [383566]
      Other proteins in same PDB: d6xvyb2, d6xvyc2, d6xvyd2, d6xvye2
      automated match to d1vyfa_
      complexed with cit, cl, plm; mutant
    4. Domain d6xvye1: 6xvy E:0-131 [383503]
      Other proteins in same PDB: d6xvyb2, d6xvyc2, d6xvyd2, d6xvye2
      automated match to d1vyfa_
      complexed with cit, cl, plm; mutant
  50. Domain(s) for 6xw9:
  51. Domain(s) for 7e25:

More info for Species Human (Homo sapiens) [TaxId:9606] from b.60.1.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.60.1.0 automated matches: